Project measure / variable:   Brinkmeyer1   clin_score_d46

ID, description, units MPD:64428   clin_score_d46   clinical score (0=normal, 6=moribund), post infection   [score]  day 46  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   5 strains     sex: both     age: 4wks
Procedure health assessment
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - clinical score (0=normal, 6=moribund), post infection day 46



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested4 strains3 strains
Mean of the strain means3.125   score 3.2778   score
Median of the strain means3.5   score 3.5   score
SD of the strain means± 1.9311 ± 0.69388
Coefficient of variation (CV)0.618 0.2117
Min–max range of strain means0.5   –   5.0   score 2.5   –   3.8333   score
Mean sample size per strain2.2   mice 2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.25 2.25 < 0.0001
Residuals 2 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC013/GeniUnc m 3.5 0.0   3 0.0 0.0 3.5, 3.5 0.32
CC016/GeniUnc f 0.5 0.70711   2   0.5 1.4142 -1.36
CC019/TauUnc f 3.0 0.0   1   0.0 0.0 3.0, 3.0 -0.06
CC019/TauUnc m 3.8333 0.76376   3 0.44096 0.1992 3.0, 4.5 0.8
CC041/TauUnc f 5.0 0.0   4 0.0 0.0 5.0, 5.0 0.97
CC061/GeniUnc f 4.0 0.0   2   0.0 0.0 4.0, 4.0 0.45
CC061/GeniUnc m 2.5 0.0   2   0.0 0.0 2.5, 2.5 -1.12




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA