Project measure / variable:   Brinkmeyer1   bw_d2

ID, description, units MPD:64402   bw_d2   body weight, post infection   [g]  day 2  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   5 strains     sex: both     age: 4wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - body weight, post infection day 2



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains4 strains
Mean of the strain means12.494   g 14.13   g
Median of the strain means13.971   g 14.16   g
SD of the strain means± 3.0595 ± 2.182
Coefficient of variation (CV)0.2449 0.1544
Min–max range of strain means8.7   –   15.45   g 11.8   –   16.4   g
Mean sample size per strain4.6   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.4267 2.4267 0.6696 0.4192
strain 3 128.9626 42.9875 11.8618 < 0.0001
sex:strain 3 26.5858 8.8619 2.4453 0.0819
Residuals 32 115.969 3.624


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC013/GeniUnc f 15.45 1.4849   2   1.05 0.0961 14.4, 16.5 0.97
CC013/GeniUnc m 12.8 3.2644   6 1.3327 0.255 9.3, 18.5 -0.61
CC016/GeniUnc f 8.7 1.2728   2   0.9 0.1463 7.8, 9.6 -1.24
CC019/TauUnc f 9.7333 1.0328   6 0.42164 0.1061 8.5, 11.4 -0.9
CC019/TauUnc m 11.8 0.751   6 0.30659 0.0636 10.4, 12.6 -1.07
CC041/TauUnc f 13.971 1.4625   7 0.55279 0.1047 11.4, 16.1 0.48
CC041/TauUnc m 16.4 0.28284   2   0.2 0.0172 16.2, 16.6 1.04
CC061/GeniUnc f 14.617 2.3819   6 0.97243 0.163 11.5, 18.7 0.69
CC061/GeniUnc m 15.52 1.6619   5 0.74324 0.1071 13.9, 17.5 0.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC013/GeniUnc f 15.45 1.346111021 18.1919384227 12.7080615773
CC013/GeniUnc m 12.8 0.7771775604 14.3830588865 11.2169411135
CC019/TauUnc f 9.7333333333 0.7771775604 11.3163922198 8.1502744469
CC019/TauUnc m 11.8 0.7771775604 13.3830588865 10.2169411135
CC041/TauUnc f 13.9714285714 0.7195266065 15.4370563076 12.5058008352
CC041/TauUnc m 16.4 1.346111021 19.1419384227 13.6580615773
CC061/GeniUnc f 14.6166666667 0.7771775604 16.1997255531 13.0336077802
CC061/GeniUnc m 15.52 0.851355362 17.254154124 13.785845876


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC013/GeniUnc both 14.125 0.7771775604 15.7080588865 12.5419411135
CC019/TauUnc both 10.7666666667 0.5495475231 11.8860583403 9.647274993
CC041/TauUnc both 15.1857142857 0.763173214 16.7402472522 13.6311813192
CC061/GeniUnc both 15.0683333333 0.5763703047 16.2423612252 13.8943054414




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA