Project measure / variable:   Lesage1   cDC2_of_tot

ID, description, units MPD:63530   cDC2_of_tot   percentage of splenic leukocytes that are cDC2 conventional dendritic cells   [%]  
Data set, strains Lesage1   CC w/par   74 strains     sex: both     age: 5-8wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains63 strains
Mean of the strain means1.0021   % 1.0192   %
Median of the strain means0.93467   % 0.9675   %
SD of the strain means± 0.4387 ± 0.49004
Coefficient of variation (CV)0.4378 0.4808
Min–max range of strain means0.284   –   2.0933   % 0.25033   –   2.695   %
Mean sample size per strain2.3   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0371 0.0371 0.5006 0.4838
strain 11 12.867 1.1697 15.8031 < 0.0001
sex:strain 11 0.3926 0.0357 0.4822 0.902
Residuals 36 2.6647 0.074


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 109 (109)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 1.45 0.35355   2   0.25 0.2438 1.2, 1.7 1.02
129S1/SvImJ m 1.17 0.16971   2   0.12 0.145 1.05, 1.29 0.31
A/J f 0.639 0.32103   2   0.227 0.5024 0.412, 0.866 -0.83
A/J m 0.756 0.05091   2   0.036 0.0673 0.72, 0.792 -0.54
C57BL/6J f 1.258 0.71416   4 0.35708 0.5677 0.769, 2.31 0.58
C57BL/6J m 1.29 0.0   1   0.0 0.0 1.29, 1.29 0.55
CAST/EiJ f 1.425 0.4879   2   0.345 0.3424 1.08, 1.77 0.96
CAST/EiJ m 1.555 0.38891   2   0.275 0.2501 1.28, 1.83 1.09
CC008/Geni m 0.784 0.00565685   2   0.004 0.0072 0.78, 0.788 -0.48
CC010/Geni f 0.69 0.21355   2   0.151 0.3095 0.539, 0.841 -0.71
CC010/Geni m 0.951 0.0   1   0.0 0.0 0.951, 0.951 -0.14
CC012/Geni f 0.62867 0.17029   3 0.09832 0.2709 0.44, 0.771 -0.85
CC012/Geni m 0.4722 0.03239   5 0.01449 0.0686 0.421, 0.501 -1.12
CC013/Geni m 0.536 0.10958   3 0.06326 0.2044 0.41, 0.609 -0.99
CC016/Geni m 0.458 0.0383   3 0.02211 0.0836 0.425, 0.5 -1.15
CC020/Geni f 0.705 0.0   1   0.0 0.0 0.705, 0.705 -0.68
CC020/Geni m 0.741 0.07637   2   0.054 0.1031 0.687, 0.795 -0.57
CC023/Geni m 0.98033 0.04539   3 0.02621 0.0463 0.941, 1.03 -0.08
CC024/Geni f 0.7625 0.20011   2   0.1415 0.2624 0.621, 0.904 -0.55
CC024/Geni m 1.14 0.0   1   0.0 0.0 1.14, 1.14 0.25
CC025/Geni f 0.92267 0.08307   3 0.04796 0.09 0.833, 0.997 -0.18
CC026/Geni m 0.44567 0.03066   3 0.0177 0.0688 0.426, 0.481 -1.17
CC027/Geni f 0.373 0.0   1   0.0 0.0 0.373, 0.373 -1.43
CC027/Geni m 0.3555 0.01344   2   0.0095 0.0378 0.346, 0.365 -1.35
CC030/Geni f 0.589 0.05515   2   0.039 0.0936 0.55, 0.628 -0.94
CC031/Geni f 0.996 0.0   1   0.0 0.0 0.996, 0.996 -0.01
CC031/Geni m 0.8295 0.06435   2   0.0455 0.0776 0.784, 0.875 -0.39
CC032/Geni m 1.2833 0.17926   3 0.10349 0.1397 1.17, 1.49 0.54
CC033/Geni f 0.56067 0.06787   3 0.03918 0.1211 0.511, 0.638 -1.01
CC038/Geni f 0.6205 0.12799   2   0.0905 0.2063 0.53, 0.711 -0.87
CC038/Geni m 0.775 0.0   1   0.0 0.0 0.775, 0.775 -0.5
CC042/Geni m 0.678 0.06502   3 0.03754 0.0959 0.612, 0.742 -0.7
CC043/Geni m 0.424 0.03727   3 0.02152 0.0879 0.381, 0.447 -1.21
CC056/Geni f 0.877 0.0   1   0.0 0.0 0.877, 0.877 -0.29
CC056/Geni m 0.699 0.02828   2   0.02 0.0405 0.679, 0.719 -0.65
CC061/Geni m 1.047 0.09564   3 0.05522 0.0913 0.961, 1.15 0.06
CIV2_FE f 2.0 0.49275   3 0.28449 0.2464 1.54, 2.52 2.27
DET3_GA m 0.631 0.08067   3 0.04658 0.1278 0.545, 0.705 -0.79
DONNELL_HA f 1.485 0.53033   2   0.375 0.3571 1.11, 1.86 1.1
DONNELL_HA m 1.6467 0.29195   3 0.16856 0.1773 1.31, 1.83 1.28
FIV_AC m 1.1025 0.04193   4 0.02097 0.038 1.06, 1.16 0.17
FUF_HE f 1.2167 0.20008   3 0.11552 0.1645 1.02, 1.42 0.49
GALASUPREME_CE m 1.0867 0.05508   3 0.0318 0.0507 1.03, 1.14 0.14
GIT_GC f 0.504 0.0   1   0.0 0.0 0.504, 0.504 -1.14
GIT_GC m 0.671 0.00565685   2   0.004 0.0084 0.667, 0.675 -0.71
HAX2_EF f 0.98467 0.08103   3 0.04678 0.0823 0.894, 1.05 -0.04
HAZ_FE f 1.38 0.0   1   0.0 0.0 1.38, 1.38 0.86
HAZ_FE m 1.435 0.02121   2   0.015 0.0148 1.42, 1.45 0.85
HIP_GA f 0.888 0.0   1   0.0 0.0 0.888, 0.888 -0.26
HIP_GA m 1.18 0.08485   2   0.06 0.0719 1.12, 1.24 0.33
HOE_GC f 0.801 0.0   1   0.0 0.0 0.801, 0.801 -0.46
HOE_GC m 0.9705 0.21142   2   0.1495 0.2179 0.821, 1.12 -0.1
JUD_EF m 1.86 0.67966   4 0.33983 0.3654 1.24, 2.53 1.72
KAV_AF f 1.88 0.0   2   0.0 0.0 1.88, 1.88 2.0
KAV_AF m 2.27 0.0   1   0.0 0.0 2.27, 2.27 2.55
LAM_DC f 0.284 0.0   1   0.0 0.0 0.284, 0.284 -1.64
LAM_DC m 0.333 0.02828   2   0.02 0.0849 0.313, 0.353 -1.4
LAT_HD f 1.132 0.37679   5 0.16851 0.3329 0.58, 1.53 0.3
LAT_HD m 1.02 0.0   2   0.0 0.0 1.02, 1.02 0.0
LAX_FC f 0.467 0.0   1   0.0 0.0 0.467, 0.467 -1.22
LAX_FC m 0.729 0.0   1   0.0 0.0 0.729, 0.729 -0.59
LEL_FH m 2.695 0.23335   2   0.165 0.0866 2.53, 2.86 3.42
LIP_BG f 1.615 0.27622   4 0.13811 0.171 1.27, 1.88 1.4
LIP_BG m 1.68 0.0   1   0.0 0.0 1.68, 1.68 1.35
LIV_DA f 1.0 0.0   1   0.0 0.0 1.0, 1.0 0.0
LIV_DA m 0.9675 0.10253   2   0.0725 0.106 0.895, 1.04 -0.11
LOD_AE f 1.0653 0.06889   3 0.03977 0.0647 0.986, 1.11 0.14
LOM_BG m 0.99167 0.22382   3 0.12922 0.2257 0.856, 1.25 -0.06
LOT_FC f 0.81817 0.1126   6 0.04597 0.1376 0.709, 1.01 -0.42
LUF_AD m 0.9742 0.17368   5 0.07767 0.1783 0.688, 1.13 -0.09
LUG_EH m 0.52233 0.05085   3 0.02936 0.0973 0.491, 0.581 -1.01
LUV_DG m 0.9275 0.1604   4 0.0802 0.1729 0.774, 1.14 -0.19
LUZ_FH f 0.86775 0.18598   4 0.09299 0.2143 0.599, 1.02 -0.31
LUZ_FH m 0.929 0.0   1   0.0 0.0 0.929, 0.929 -0.18
MERCURI_HF m 0.25033 0.01266   3 0.00731057 0.0506 0.236, 0.26 -1.57
NOD/ShiLtJ f 1.405 0.12021   2   0.085 0.0856 1.32, 1.49 0.92
NOD/ShiLtJ m 1.495 0.16263   2   0.115 0.1088 1.38, 1.61 0.97
NZO/HlLtJ f 0.639 0.20223   2   0.143 0.3165 0.496, 0.782 -0.83
NZO/HlLtJ m 0.6235 0.14354   2   0.1015 0.2302 0.522, 0.725 -0.81
PAT_CD m 0.33833 0.04632   3 0.02674 0.1369 0.287, 0.377 -1.39
PEF_EC f 0.62967 0.08541   3 0.04931 0.1356 0.574, 0.728 -0.85
PEF_EC m 0.682 0.11414   3 0.0659 0.1674 0.555, 0.776 -0.69
POH_DC f 0.73533 0.07153   3 0.0413 0.0973 0.665, 0.808 -0.61
PWK/PhJ f 1.205 0.10607   2   0.075 0.088 1.13, 1.28 0.46
PWK/PhJ m 1.465 0.50205   2   0.355 0.3427 1.11, 1.82 0.91
SEH_AH f 1.43 0.0   1   0.0 0.0 1.43, 1.43 0.98
SEH_AH m 1.3625 0.03862   4 0.01931 0.0283 1.31, 1.4 0.7
STUCKY_HF f 0.99367 0.11234   3 0.06486 0.1131 0.905, 1.12 -0.02
STUCKY_HF m 1.34 0.0   1   0.0 0.0 1.34, 1.34 0.65
VIT_ED f 0.94667 0.0402   3 0.02321 0.0425 0.909, 0.989 -0.13
VUX2_HF m 1.8267 0.19553   3 0.11289 0.107 1.64, 2.03 1.65
WAD f 0.43333 0.12543   3 0.07242 0.2895 0.355, 0.578 -1.3
WSB/EiJ f 1.1045 0.61589   2   0.4355 0.5576 0.669, 1.54 0.23
WSB/EiJ m 0.8365 0.20718   2   0.1465 0.2477 0.69, 0.983 -0.37
XAD8_BG f 0.95 0.0   1   0.0 0.0 0.95, 0.95 -0.12
XAD8_BG m 0.85167 0.05227   3 0.03018 0.0614 0.795, 0.898 -0.34
XAH3_GH m 1.0317 0.12868   3 0.07429 0.1247 0.95, 1.18 0.03
XAS4_AF m 0.86667 0.11288   3 0.06517 0.1302 0.773, 0.992 -0.31
XAV_AH m 0.74867 0.09613   3 0.0555 0.1284 0.683, 0.859 -0.55
XAW2_CD m 0.617 0.09899   2   0.07 0.1604 0.547, 0.687 -0.82
XEB2_AG f 2.0933 0.08083   3 0.04667 0.0386 2.02, 2.18 2.49
XEB2_AG m 1.9133 0.21502   3 0.12414 0.1124 1.73, 2.15 1.82
XEB_AF f 1.855 0.20506   2   0.145 0.1105 1.71, 2.0 1.94
XEB_AF m 1.67 0.0   1   0.0 0.0 1.67, 1.67 1.33
XEQ_EH m 1.1223 0.22176   3 0.12803 0.1976 0.907, 1.35 0.21
XXEN2_DC m 0.59 0.05866   3 0.03387 0.0994 0.541, 0.655 -0.88
XXEN3_DC f 0.789 0.0   1   0.0 0.0 0.789, 0.789 -0.49
XXEN3_DC m 0.979 0.0   1   0.0 0.0 0.979, 0.979 -0.08
YOX_DE m 1.6067 0.12423   3 0.07172 0.0773 1.53, 1.75 1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.45 0.1924 1.8402 1.0598
129S1/SvImJ m 1.17 0.1924 1.5602 0.7798
A/J f 0.639 0.1924 1.0292 0.2488
A/J m 0.756 0.1924 1.1462 0.3658
CAST/EiJ f 1.425 0.1924 1.8152 1.0348
CAST/EiJ m 1.555 0.1924 1.9452 1.1648
CC012/Geni f 0.6287 0.1571 0.9472 0.3101
CC012/Geni m 0.4722 0.1217 0.719 0.2254
DONNELL_HA f 1.485 0.1924 1.8752 1.0948
DONNELL_HA m 1.6467 0.1571 1.9652 1.3281
LAT_HD f 1.132 0.1217 1.3788 0.8852
LAT_HD m 1.02 0.1924 1.4102 0.6298
NOD/ShiLtJ f 1.405 0.1924 1.7952 1.0148
NOD/ShiLtJ m 1.495 0.1924 1.8852 1.1048
NZO/HlLtJ f 0.639 0.1924 1.0292 0.2488
NZO/HlLtJ m 0.6235 0.1924 1.0137 0.2333
PEF_EC f 0.6297 0.1571 0.9482 0.3111
PEF_EC m 0.682 0.1571 1.0006 0.3634
PWK/PhJ f 1.205 0.1924 1.5952 0.8148
PWK/PhJ m 1.465 0.1924 1.8552 1.0748
WSB/EiJ f 1.1045 0.1924 1.4947 0.7143
WSB/EiJ m 0.8365 0.1924 1.2267 0.4463
XEB2_AG f 2.0933 0.1571 2.4119 1.7748
XEB2_AG m 1.9133 0.1571 2.2319 1.5948


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.31 0.136 1.5859 1.0341
A/J both 0.6975 0.136 0.9734 0.4216
CAST/EiJ both 1.49 0.136 1.7659 1.2141
CC012/Geni both 0.5504 0.0993 0.7519 0.349
DONNELL_HA both 1.5658 0.1242 1.8177 1.314
LAT_HD both 1.076 0.1138 1.3068 0.8452
NOD/ShiLtJ both 1.45 0.136 1.7259 1.1741
NZO/HlLtJ both 0.6313 0.136 0.9071 0.3554
PEF_EC both 0.6558 0.1111 0.8811 0.4306
PWK/PhJ both 1.335 0.136 1.6109 1.0591
WSB/EiJ both 0.9705 0.136 1.2464 0.6946
XEB2_AG both 2.0033 0.1111 2.2286 1.7781




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA