Phenotype measure:   Lesage1   cDC2_of_cDC

ID, description, units MPD:63529   cDC2_of_cDC   percentage of splenic conventional dendritic cells that are cDC2   [%]
Data set, strains Lesage1   CC w/par   63 strains     sex: both     age: 5-8wks
Procedure immune cell quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Lesage1 - percentage of splenic conventional dendritic cells that are cDC2



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains63 strains
Mean of the strain means54.15   % 52.26   %
Median of the strain means53.63   % 53.4   %
SD of the strain means± 11.526 ± 12.156
Coefficient of variation (CV)0.2129 0.2326
Min–max range of strain means24.0   –   77.07   % 25.333   –   73.35   %
Mean sample size per strain2.3   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 146.016 146.016 8.6405 0.0057
strain 11 5951.3256 541.0296 32.0153 < 0.0001
sex:strain 11 492.4878 44.7716 2.6494 0.0135
Residuals 36 608.3667 16.8991


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 70.3 5.374   2   3.8 0.0764 66.5, 74.1 1.4
129S1/SvImJ m 67.55 2.3335   2   1.65 0.0345 65.9, 69.2 1.26
A/J f 61.25 4.7376   2   3.35 0.0773 57.9, 64.6 0.62
A/J m 61.6 0.98995   2   0.7 0.0161 60.9, 62.3 0.77
C57BL/6J f 58.42 4.9648   4 2.4824 0.085 53.1, 62.9 0.37
C57BL/6J m 60.3 0.0   1   0.0 0.0 60.3, 60.3 0.66
CAST/EiJ f 74.5 2.8284   2   2.0 0.038 72.5, 76.5 1.77
CAST/EiJ m 73.35 3.4648   2   2.45 0.0472 70.9, 75.8 1.73
CC008/Geni m 60.95 5.0205   2   3.55 0.0824 57.4, 64.5 0.71
CC010/Geni f 45.05 0.07071   2   0.05 0.0016 45.0, 45.1 -0.79
CC010/Geni m 44.8 0.0   1   0.0 0.0 44.8, 44.8 -0.61
CC012/Geni f 69.97 1.4844   3 0.857 0.0212 68.7, 71.6 1.37
CC012/Geni m 63.86 4.8691   5 2.1775 0.0762 59.5, 70.1 0.95
CC013/Geni m 45.433 3.4005   3 1.9633 0.0748 42.0, 48.8 -0.56
CC016/Geni m 42.333 2.203   3 1.2719 0.052 40.2, 44.6 -0.82
CC020/Geni f 48.3 0.0   1   0.0 0.0 48.3, 48.3 -0.51
CC020/Geni m 52.5 6.7882   2   4.8 0.1293 47.7, 57.3 0.02
CC023/Geni m 42.3 1.852   3 1.0693 0.0438 40.2, 43.7 -0.82
CC024/Geni f 51.25 1.7678   2   1.25 0.0345 50.0, 52.5 -0.25
CC024/Geni m 45.2 0.0   1   0.0 0.0 45.2, 45.2 -0.58
CC025/Geni f 63.8 1.4731   3 0.85049 0.0231 62.9, 65.5 0.84
CC026/Geni m 31.933 1.464   3 0.84525 0.0458 30.6, 33.5 -1.67
CC027/Geni f 24.0 0.0   1   0.0 0.0 24.0, 24.0 -2.62
CC027/Geni m 26.3 0.14142   2   0.1 0.0054 26.2, 26.4 -2.14
CC030/Geni f 49.2 4.2426   2   3.0 0.0862 46.2, 52.2 -0.43
CC031/Geni f 52.0 0.0   1   0.0 0.0 52.0, 52.0 -0.19
CC031/Geni m 50.1 0.56569   2   0.4 0.0113 49.7, 50.5 -0.18
CC032/Geni m 49.767 4.0129   3 2.3168 0.0806 47.4, 54.4 -0.21
CC033/Geni f 32.8 1.7436   3 1.0066 0.0532 31.6, 34.8 -1.85
CC038/Geni f 50.7 3.1113   2   2.2 0.0614 48.5, 52.9 -0.3
CC038/Geni m 51.6 0.0   1   0.0 0.0 51.6, 51.6 -0.05
CC042/Geni m 31.5 1.179   3 0.68069 0.0374 30.2, 32.5 -1.71
CC043/Geni m 25.333 0.70238   3 0.40552 0.0277 24.6, 26.0 -2.22
CC056/Geni f 36.6 0.0   1   0.0 0.0 36.6, 36.6 -1.52
CC056/Geni m 33.05 0.35355   2   0.25 0.0107 32.8, 33.3 -1.58
CC061/Geni m 46.033 1.8009   3 1.0398 0.0391 44.2, 47.8 -0.51
CIV2_FE f 54.13 2.1008   3 1.2129 0.0388 52.0, 56.2 0.0
DET3_GA m 43.7 1.7436   3 1.0066 0.0399 41.7, 44.9 -0.7
DONNELL_HA f 50.45 4.0305   2   2.85 0.0799 47.6, 53.3 -0.32
DONNELL_HA m 50.83 5.2051   3 3.0052 0.1024 45.5, 55.9 -0.12
FIV_AC m 63.17 2.2232   4 1.1116 0.0352 61.7, 66.4 0.9
FUF_HE f 49.167 2.2368   3 1.2914 0.0455 47.2, 51.6 -0.43
GALASUPREME_CE m 54.33 0.32146   3 0.18559 0.0059 54.1, 54.7 0.17
GIT_GC f 47.8 0.0   1   0.0 0.0 47.8, 47.8 -0.55
GIT_GC m 49.5 2.1213   2   1.5 0.0429 48.0, 51.0 -0.23
HAX2_EF f 50.47 1.2662   3 0.73106 0.0251 49.1, 51.6 -0.32
HAZ_FE f 58.1 0.0   1   0.0 0.0 58.1, 58.1 0.34
HAZ_FE m 61.4 3.1113   2   2.2 0.0507 59.2, 63.6 0.75
HIP_GA f 60.0 0.0   1   0.0 0.0 60.0, 60.0 0.51
HIP_GA m 55.05 2.4749   2   1.75 0.045 53.3, 56.8 0.23
HOE_GC f 70.8 0.0   1   0.0 0.0 70.8, 70.8 1.44
HOE_GC m 65.95 2.192   2   1.55 0.0332 64.4, 67.5 1.13
JUD_EF m 56.5 5.9828   4 2.9914 0.1059 49.8, 63.3 0.35
KAV_AF f 60.4 0.98995   2   0.7 0.0164 59.7, 61.1 0.54
KAV_AF m 64.9 0.0   1   0.0 0.0 64.9, 64.9 1.04
LAM_DC f 30.4 0.0   1   0.0 0.0 30.4, 30.4 -2.06
LAM_DC m 33.9 2.1213   2   1.5 0.0626 32.4, 35.4 -1.51
LAT_HD f 63.42 3.3147   5 1.4824 0.0523 59.2, 66.3 0.8
LAT_HD m 44.0 1.1314   2   0.8 0.0257 43.2, 44.8 -0.68
LAX_FC f 63.1 0.0   1   0.0 0.0 63.1, 63.1 0.78
LAX_FC m 62.9 0.0   1   0.0 0.0 62.9, 62.9 0.87
LEL_FH m 61.5 6.2225   2   4.4 0.1012 57.1, 65.9 0.76
LIP_BG f 57.5 1.3367   4 0.66833 0.0232 56.1, 59.3 0.29
LIP_BG m 50.4 0.0   1   0.0 0.0 50.4, 50.4 -0.15
LIV_DA f 50.3 0.0   1   0.0 0.0 50.3, 50.3 -0.33
LIV_DA m 46.05 2.192   2   1.55 0.0476 44.5, 47.6 -0.51
LOD_AE f 56.97 4.0278   3 2.3255 0.0707 54.3, 61.6 0.24
LOM_BG m 51.43 5.0935   3 2.9407 0.099 45.6, 55.0 -0.07
LOT_FC f 49.583 4.3329   6 1.7689 0.0874 43.3, 54.9 -0.4
LUF_AD m 49.62 3.7652   5 1.6839 0.0759 44.0, 54.3 -0.22
LUG_EH m 67.03 1.124   3 0.64893 0.0168 65.8, 68.0 1.21
LUV_DG m 58.0 12.54   4 6.2699 0.2162 46.5, 68.9 0.47
LUZ_FH f 48.075 4.6017   4 2.3009 0.0957 42.8, 53.9 -0.53
LUZ_FH m 54.3 0.0   1   0.0 0.0 54.3, 54.3 0.17
MERCURI_HF m 26.867 1.0066   3 0.58119 0.0375 25.8, 27.8 -2.09
NOD/ShiLtJ f 64.85 2.7577   2   1.95 0.0425 62.9, 66.8 0.93
NOD/ShiLtJ m 63.7 0.14142   2   0.1 0.0022 63.6, 63.8 0.94
NZO/HlLtJ f 58.35 6.4347   2   4.55 0.1103 53.8, 62.9 0.36
NZO/HlLtJ m 55.6 0.14142   2   0.1 0.0025 55.5, 55.7 0.27
PAT_CD m 33.867 1.8877   3 1.0899 0.0557 31.8, 35.5 -1.51
PEF_EC f 41.3 2.1   3 1.2124 0.0508 38.9, 42.8 -1.11
PEF_EC m 39.767 2.7154   3 1.5677 0.0683 36.9, 42.3 -1.03
POH_DC f 53.13 4.7269   3 2.7291 0.089 47.7, 56.3 -0.09
PWK/PhJ f 71.2 1.2728   2   0.9 0.0179 70.3, 72.1 1.48
PWK/PhJ m 73.05 4.3134   2   3.05 0.059 70.0, 76.1 1.71
SEH_AH f 43.5 0.0   1   0.0 0.0 43.5, 43.5 -0.92
SEH_AH m 43.875 2.6399   4 1.32 0.0602 41.4, 46.8 -0.69
STUCKY_HF f 45.0 7.3301   3 4.232 0.1629 39.9, 53.4 -0.79
STUCKY_HF m 53.4 0.0   1   0.0 0.0 53.4, 53.4 0.09
VIT_ED f 56.4 3.5   3 2.0207 0.0621 52.9, 59.9 0.2
VUX2_HF m 70.2 2.0881   3 1.2055 0.0297 67.8, 71.6 1.48
WAD f 39.233 6.8676   3 3.965 0.175 32.1, 45.8 -1.29
WSB/EiJ f 61.15 14.779   2   10.45 0.2417 50.7, 71.6 0.61
WSB/EiJ m 63.6 0.84853   2   0.6 0.0133 63.0, 64.2 0.93
XAD8_BG f 48.7 0.0   1   0.0 0.0 48.7, 48.7 -0.47
XAD8_BG m 42.8 2.3302   3 1.3454 0.0544 40.9, 45.4 -0.78
XAH3_GH m 54.33 2.7154   3 1.5677 0.05 51.8, 57.2 0.17
XAS4_AF m 61.7 4.8816   3 2.8184 0.0791 57.6, 67.1 0.78
XAV_AH m 47.533 1.2423   3 0.71725 0.0261 46.1, 48.3 -0.39
XAW2_CD m 38.35 1.4849   2   1.05 0.0387 37.3, 39.4 -1.14
XEB2_AG f 77.07 1.3204   3 0.76231 0.0171 75.9, 78.5 1.99
XEB2_AG m 72.2 0.36056   3 0.20817 0.005 71.9, 72.6 1.64
XEB_AF f 66.45 2.6163   2   1.85 0.0394 64.6, 68.3 1.07
XEB_AF m 67.3 0.0   1   0.0 0.0 67.3, 67.3 1.24
XEQ_EH m 67.5 1.6371   3 0.94516 0.0243 66.1, 69.3 1.25
XXEN2_DC m 53.53 1.7786   3 1.0269 0.0332 51.5, 54.8 0.1
XXEN3_DC f 55.7 0.0   1   0.0 0.0 55.7, 55.7 0.13
XXEN3_DC m 54.7 0.0   1   0.0 0.0 54.7, 54.7 0.2
YOX_DE m 58.57 0.85049   3 0.49103 0.0145 57.7, 59.4 0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 70.3 2.9068 76.1953 64.4047
129S1/SvImJ m 67.55 2.9068 73.4453 61.6547
A/J f 61.25 2.9068 67.1453 55.3547
A/J m 61.6 2.9068 67.4953 55.7047
CAST/EiJ f 74.5 2.9068 80.3953 68.6047
CAST/EiJ m 73.35 2.9068 79.2453 67.4547
CC012/Geni f 69.9667 2.3734 74.7801 65.1532
CC012/Geni m 63.86 1.8384 67.5885 60.1315
DONNELL_HA f 50.45 2.9068 56.3453 44.5547
DONNELL_HA m 50.8333 2.3734 55.6468 46.0199
LAT_HD f 63.42 1.8384 67.1485 59.6915
LAT_HD m 44.0 2.9068 49.8953 38.1047
NOD/ShiLtJ f 64.85 2.9068 70.7453 58.9547
NOD/ShiLtJ m 63.7 2.9068 69.5953 57.8047
NZO/HlLtJ f 58.35 2.9068 64.2453 52.4547
NZO/HlLtJ m 55.6 2.9068 61.4953 49.7047
PEF_EC f 41.3 2.3734 46.1135 36.4865
PEF_EC m 39.7667 2.3734 44.5801 34.9532
PWK/PhJ f 71.2 2.9068 77.0953 65.3047
PWK/PhJ m 73.05 2.9068 78.9453 67.1547
WSB/EiJ f 61.15 2.9068 67.0453 55.2547
WSB/EiJ m 63.6 2.9068 69.4953 57.7047
XEB2_AG f 77.0667 2.3734 81.8801 72.2532
XEB2_AG m 72.2 2.3734 77.0135 67.3865


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 68.925 2.0554 73.0936 64.7564
A/J both 61.425 2.0554 65.5936 57.2564
CAST/EiJ both 73.925 2.0554 78.0936 69.7564
CC012/Geni both 66.9133 1.5011 69.9576 63.869
DONNELL_HA both 50.6417 1.8763 54.4471 46.8363
LAT_HD both 53.71 1.7197 57.1977 50.2223
NOD/ShiLtJ both 64.275 2.0554 68.4436 60.1064
NZO/HlLtJ both 56.975 2.0554 61.1436 52.8064
PEF_EC both 40.5333 1.6782 43.937 37.1297
PWK/PhJ both 72.125 2.0554 76.2936 67.9564
WSB/EiJ both 62.375 2.0554 66.5436 58.2064
XEB2_AG both 74.6333 1.6782 78.037 71.2297




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA