Phenotype measure:   Lesage1   cDC1_of_cDC

ID, description, units MPD:63527   cDC1_of_cDC   percentage of splenic conventional dendritic cells that are cDC1   [%]
Data set, strains Lesage1   CC w/par   63 strains     sex: both     age: 5-8wks
Procedure immune cell quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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Lesage1 - percentage of splenic conventional dendritic cells that are cDC1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains63 strains
Mean of the strain means18.697   % 20.8   %
Median of the strain means18.375   % 19.367   %
SD of the strain means± 10.363 ± 9.4969
Coefficient of variation (CV)0.5542 0.4566
Min–max range of strain means1.8367   –   48.7   % 6.39   –   43.8   %
Mean sample size per strain2.3   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 43.401 43.401 5.9652 0.0196
strain 11 4861.4211 441.9474 60.7426 < 0.0001
sex:strain 11 162.605 14.7823 2.0317 0.0541
Residuals 36 261.9268 7.2757


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 11.7 1.2728   2   0.9 0.1088 10.8, 12.6 -0.68
129S1/SvImJ m 12.95 2.192   2   1.55 0.1693 11.4, 14.5 -0.83
A/J f 20.45 1.3435   2   0.95 0.0657 19.5, 21.4 0.17
A/J m 19.65 1.0607   2   0.75 0.054 18.9, 20.4 -0.12
C57BL/6J f 24.475 2.7897   4 1.3949 0.114 22.2, 27.9 0.56
C57BL/6J m 22.7 0.0   1   0.0 0.0 22.7, 22.7 0.2
CAST/EiJ f 8.215 1.7324   2   1.225 0.2109 6.99, 9.44 -1.01
CAST/EiJ m 9.11 2.39   2   1.69 0.2624 7.42, 10.8 -1.23
CC008/Geni m 22.05 2.3335   2   1.65 0.1058 20.4, 23.7 0.13
CC010/Geni f 20.4 1.9799   2   1.4 0.0971 19.0, 21.8 0.16
CC010/Geni m 18.3 0.0   1   0.0 0.0 18.3, 18.3 -0.26
CC012/Geni f 7.0 2.228   3 1.2863 0.3183 5.43, 9.55 -1.13
CC012/Geni m 12.354 4.0157   5 1.7959 0.325 7.45, 16.8 -0.89
CC013/Geni m 22.1 1.0   3 0.57735 0.0452 21.1, 23.1 0.14
CC016/Geni m 35.8 1.7692   3 1.0214 0.0494 34.2, 37.7 1.58
CC020/Geni f 9.65 0.0   1   0.0 0.0 9.65, 9.65 -0.87
CC020/Geni m 7.08 1.3576   2   0.96 0.1918 6.12, 8.04 -1.44
CC023/Geni m 30.533 1.8009   3 1.0398 0.059 28.7, 32.3 1.02
CC024/Geni f 22.05 1.4849   2   1.05 0.0673 21.0, 23.1 0.32
CC024/Geni m 26.0 0.0   1   0.0 0.0 26.0, 26.0 0.55
CC025/Geni f 1.8367 0.33724   3 0.19471 0.1836 1.45, 2.07 -1.63
CC026/Geni m 40.633 1.4844   3 0.857 0.0365 39.0, 41.9 2.09
CC027/Geni f 48.7 0.0   1   0.0 0.0 48.7, 48.7 2.9
CC027/Geni m 43.8 0.14142   2   0.1 0.0032 43.7, 43.9 2.42
CC030/Geni f 23.85 1.4849   2   1.05 0.0623 22.8, 24.9 0.5
CC031/Geni f 18.0 0.0   1   0.0 0.0 18.0, 18.0 -0.07
CC031/Geni m 20.4 0.56569   2   0.4 0.0277 20.0, 20.8 -0.04
CC032/Geni m 26.667 3.5726   3 2.0626 0.134 22.6, 29.3 0.62
CC033/Geni f 42.867 1.6743   3 0.96667 0.0391 41.9, 44.8 2.33
CC038/Geni f 18.75 2.0506   2   1.45 0.1094 17.3, 20.2 0.01
CC038/Geni m 17.1 0.0   1   0.0 0.0 17.1, 17.1 -0.39
CC042/Geni m 29.8 0.43589   3 0.25166 0.0146 29.5, 30.3 0.95
CC043/Geni m 29.333 1.8448   3 1.0651 0.0629 27.3, 30.9 0.9
CC056/Geni f 32.7 0.0   1   0.0 0.0 32.7, 32.7 1.35
CC056/Geni m 37.5 1.1314   2   0.8 0.0302 36.7, 38.3 1.76
CC061/Geni m 30.567 3.1533   3 1.8206 0.1032 27.8, 34.0 1.03
CIV2_FE f 25.5 1.4107   3 0.81445 0.0553 24.2, 27.0 0.66
DET3_GA m 36.0 1.1533   3 0.66583 0.032 35.1, 37.3 1.6
DONNELL_HA f 25.85 2.192   2   1.55 0.0848 24.3, 27.4 0.69
DONNELL_HA m 24.9 2.9206   3 1.6862 0.1173 21.8, 27.6 0.43
FIV_AC m 13.3 2.3594   4 1.1797 0.1774 10.5, 15.4 -0.79
FUF_HE f 19.633 2.2301   3 1.2875 0.1136 17.1, 21.3 0.09
GALASUPREME_CE m 13.1 0.75498   3 0.43589 0.0576 12.3, 13.8 -0.81
GIT_GC f 9.52 0.0   1   0.0 0.0 9.52, 9.52 -0.89
GIT_GC m 10.015 0.26163   2   0.185 0.0261 9.83, 10.2 -1.14
HAX2_EF f 10.873 2.0455   3 1.181 0.1881 8.92, 13.0 -0.76
HAZ_FE f 22.1 0.0   1   0.0 0.0 22.1, 22.1 0.33
HAZ_FE m 18.7 0.56569   2   0.4 0.0303 18.3, 19.1 -0.22
HIP_GA f 16.9 0.0   1   0.0 0.0 16.9, 16.9 -0.17
HIP_GA m 19.4 0.14142   2   0.1 0.0073 19.3, 19.5 -0.15
HOE_GC f 7.58 0.0   1   0.0 0.0 7.58, 7.58 -1.07
HOE_GC m 11.45 0.49497   2   0.35 0.0432 11.1, 11.8 -0.98
JUD_EF m 22.875 5.6818   4 2.8409 0.2484 17.1, 29.0 0.22
KAV_AF f 20.25 0.77782   2   0.55 0.0384 19.7, 20.8 0.15
KAV_AF m 18.0 0.0   1   0.0 0.0 18.0, 18.0 -0.29
LAM_DC f 45.2 0.0   1   0.0 0.0 45.2, 45.2 2.56
LAM_DC m 41.3 4.5255   2   3.2 0.1096 38.1, 44.5 2.16
LAT_HD f 12.83 2.4994   5 1.1178 0.1948 8.65, 15.0 -0.57
LAT_HD m 22.1 1.5556   2   1.1 0.0704 21.0, 23.2 0.14
LAX_FC f 15.5 0.0   1   0.0 0.0 15.5, 15.5 -0.31
LAX_FC m 16.1 0.0   1   0.0 0.0 16.1, 16.1 -0.49
LEL_FH m 22.25 5.0205   2   3.55 0.2256 18.7, 25.8 0.15
LIP_BG f 16.05 1.3229   4 0.66144 0.0824 14.5, 17.2 -0.26
LIP_BG m 16.4 0.0   1   0.0 0.0 16.4, 16.4 -0.46
LIV_DA f 20.8 0.0   1   0.0 0.0 20.8, 20.8 0.2
LIV_DA m 22.65 0.49497   2   0.35 0.0219 22.3, 23.0 0.19
LOD_AE f 24.3 2.2068   3 1.2741 0.0908 22.2, 26.6 0.54
LOM_BG m 18.967 3.3307   3 1.923 0.1756 16.3, 22.7 -0.19
LOT_FC f 5.9433 2.2734   6 0.9281 0.3825 3.58, 8.97 -1.23
LUF_AD m 24.18 2.0801   5 0.93027 0.086 21.8, 27.1 0.36
LUG_EH m 9.41 0.98605   3 0.5693 0.1048 8.35, 10.3 -1.2
LUV_DG m 15.425 2.063   4 1.0315 0.1337 13.6, 17.8 -0.57
LUZ_FH f 17.7 3.1507   4 1.5753 0.178 14.7, 21.4 -0.1
LUZ_FH m 13.2 0.0   1   0.0 0.0 13.2, 13.2 -0.8
MERCURI_HF m 31.467 1.5885   3 0.91712 0.0505 30.5, 33.3 1.12
NOD/ShiLtJ f 13.75 0.49497   2   0.35 0.036 13.4, 14.1 -0.48
NOD/ShiLtJ m 10.95 0.21213   2   0.15 0.0194 10.8, 11.1 -1.04
NZO/HlLtJ f 16.2 3.2527   2   2.3 0.2008 13.9, 18.5 -0.24
NZO/HlLtJ m 18.1 0.84853   2   0.6 0.0469 17.5, 18.7 -0.28
PAT_CD m 34.9 2.4434   3 1.4107 0.07 32.1, 36.6 1.48
PEF_EC f 36.6 2.5865   3 1.4933 0.0707 34.3, 39.4 1.73
PEF_EC m 38.467 1.5503   3 0.89505 0.0403 36.9, 40.0 1.86
POH_DC f 8.9567 0.94177   3 0.54373 0.1051 8.05, 9.93 -0.94
PWK/PhJ f 5.735 1.1384   2   0.805 0.1985 4.93, 6.54 -1.25
PWK/PhJ m 7.0 1.8809   2   1.33 0.2687 5.67, 8.33 -1.45
SEH_AH f 12.9 0.0   1   0.0 0.0 12.9, 12.9 -0.56
SEH_AH m 15.5 1.1165   4 0.55827 0.072 14.6, 16.9 -0.56
STUCKY_HF f 15.867 3.4962   3 2.0185 0.2203 11.9, 18.5 -0.27
STUCKY_HF m 11.4 0.0   1   0.0 0.0 11.4, 11.4 -0.99
VIT_ED f 24.733 3.037   3 1.7534 0.1228 22.2, 28.1 0.58
VUX2_HF m 7.8267 0.99304   3 0.57333 0.1269 6.72, 8.64 -1.37
WAD f 24.267 2.7737   3 1.6014 0.1143 21.2, 26.6 0.54
WSB/EiJ f 20.7 9.1924   2   6.5 0.4441 14.2, 27.2 0.19
WSB/EiJ m 18.0 0.28284   2   0.2 0.0157 17.8, 18.2 -0.29
XAD8_BG f 22.0 0.0   1   0.0 0.0 22.0, 22.0 0.32
XAD8_BG m 29.367 2.5697   3 1.4836 0.0875 26.4, 30.9 0.9
XAH3_GH m 11.333 0.23094   3 0.13333 0.0204 11.2, 11.6 -1.0
XAS4_AF m 15.8 0.8   3 0.46188 0.0506 15.0, 16.6 -0.53
XAV_AH m 16.167 1.2014   3 0.69362 0.0743 15.0, 17.4 -0.49
XAW2_CD m 30.3 3.5355   2   2.5 0.1167 27.8, 32.8 1.0
XEB2_AG f 5.5733 0.32655   3 0.18853 0.0586 5.37, 5.95 -1.27
XEB2_AG m 6.77 0.61294   3 0.35388 0.0905 6.09, 7.28 -1.48
XEB_AF f 5.925 0.17678   2   0.125 0.0298 5.8, 6.05 -1.23
XEB_AF m 6.39 0.0   1   0.0 0.0 6.39, 6.39 -1.52
XEQ_EH m 12.733 0.70946   3 0.40961 0.0557 12.1, 13.5 -0.85
XXEN2_DC m 22.9 2.1932   3 1.2662 0.0958 21.0, 25.3 0.22
XXEN3_DC f 19.7 0.0   1   0.0 0.0 19.7, 19.7 0.1
XXEN3_DC m 21.5 0.0   1   0.0 0.0 21.5, 21.5 0.07
YOX_DE m 19.367 1.222   3 0.70553 0.0631 18.3, 20.7 -0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 11.7 1.9073 15.5682 7.8318
129S1/SvImJ m 12.95 1.9073 16.8182 9.0818
A/J f 20.45 1.9073 24.3182 16.5818
A/J m 19.65 1.9073 23.5182 15.7818
CAST/EiJ f 8.215 1.9073 12.0832 4.3468
CAST/EiJ m 9.11 1.9073 12.9782 5.2418
CC012/Geni f 7.0 1.5573 10.1584 3.8416
CC012/Geni m 12.354 1.2063 14.8005 9.9075
DONNELL_HA f 25.85 1.9073 29.7182 21.9818
DONNELL_HA m 24.9 1.5573 28.0584 21.7416
LAT_HD f 12.83 1.2063 15.2765 10.3835
LAT_HD m 22.1 1.9073 25.9682 18.2318
NOD/ShiLtJ f 13.75 1.9073 17.6182 9.8818
NOD/ShiLtJ m 10.95 1.9073 14.8182 7.0818
NZO/HlLtJ f 16.2 1.9073 20.0682 12.3318
NZO/HlLtJ m 18.1 1.9073 21.9682 14.2318
PEF_EC f 36.6 1.5573 39.7584 33.4416
PEF_EC m 38.4667 1.5573 41.6251 35.3083
PWK/PhJ f 5.735 1.9073 9.6032 1.8668
PWK/PhJ m 7.0 1.9073 10.8682 3.1318
WSB/EiJ f 20.7 1.9073 24.5682 16.8318
WSB/EiJ m 18.0 1.9073 21.8682 14.1318
XEB2_AG f 5.5733 1.5573 8.7317 2.4149
XEB2_AG m 6.77 1.5573 9.9284 3.6116


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 12.325 1.3487 15.0602 9.5898
A/J both 20.05 1.3487 22.7852 17.3148
CAST/EiJ both 8.6625 1.3487 11.3977 5.9273
CC012/Geni both 9.677 0.9849 11.6745 7.6795
DONNELL_HA both 25.375 1.2312 27.8719 22.8781
LAT_HD both 17.465 1.1284 19.7535 15.1765
NOD/ShiLtJ both 12.35 1.3487 15.0852 9.6148
NZO/HlLtJ both 17.15 1.3487 19.8852 14.4148
PEF_EC both 37.5333 1.1012 39.7667 35.3
PWK/PhJ both 6.3675 1.3487 9.1027 3.6323
WSB/EiJ both 19.35 1.3487 22.0852 16.6148
XEB2_AG both 6.1717 1.1012 8.405 3.9383




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA