Project measure / variable:   Lesage1   mDC_of_cDC

ID, description, units MPD:63525   mDC_of_cDC   percentage of splenic conventional dendritic cells that are merocytic   [%]  
Data set, strains Lesage1   CC w/par   74 strains     sex: both     age: 5-8wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Lesage1 - percentage of splenic conventional dendritic cells that are merocytic



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested46 strains63 strains
Mean of the strain means21.734   % 21.375   %
Median of the strain means19.1   % 20.05   %
SD of the strain means± 8.4598 ± 7.206
Coefficient of variation (CV)0.3892 0.3371
Min–max range of strain means9.77   –   42.817   % 9.8   –   40.1   %
Mean sample size per strain2.3   mice 2.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 61.6512 61.6512 5.2512 0.0279
strain 11 413.3923 37.5811 3.201 0.004
sex:strain 11 134.5261 12.2296 1.0417 0.4325
Residuals 36 422.6506 11.7403


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 15.75 3.6062   2   2.55 0.229 13.2, 18.3 -0.71
129S1/SvImJ m 17.55 0.91924   2   0.65 0.0524 16.9, 18.2 -0.53
A/J f 13.25 4.0305   2   2.85 0.3042 10.4, 16.1 -1.0
A/J m 14.8 1.6971   2   1.2 0.1147 13.6, 16.0 -0.91
C57BL/6J f 12.248 2.3595   4 1.1797 0.1926 9.69, 14.8 -1.12
C57BL/6J m 14.2 0.0   1   0.0 0.0 14.2, 14.2 -1.0
CAST/EiJ f 14.75 0.6364   2   0.45 0.0431 14.3, 15.2 -0.83
CAST/EiJ m 14.85 0.49497   2   0.35 0.0333 14.5, 15.2 -0.91
CC008/Geni m 9.98 2.1496   2   1.52 0.2154 8.46, 11.5 -1.58
CC010/Geni f 31.1 1.4142   2   1.0 0.0455 30.1, 32.1 1.11
CC010/Geni m 34.3 0.0   1   0.0 0.0 34.3, 34.3 1.79
CC012/Geni f 18.4 1.9672   3 1.1358 0.1069 16.6, 20.5 -0.39
CC012/Geni m 19.92 6.6285   5 2.9644 0.3328 15.0, 31.5 -0.2
CC013/Geni m 24.667 4.1356   3 2.3877 0.1677 21.1, 29.2 0.46
CC016/Geni m 12.233 0.30551   3 0.17638 0.025 11.9, 12.5 -1.27
CC020/Geni f 38.2 0.0   1   0.0 0.0 38.2, 38.2 1.95
CC020/Geni m 35.85 6.8589   2   4.85 0.1913 31.0, 40.7 2.01
CC023/Geni m 20.133 0.80829   3 0.46667 0.0401 19.2, 20.6 -0.17
CC024/Geni f 18.45 1.6263   2   1.15 0.0881 17.3, 19.6 -0.39
CC024/Geni m 25.0 0.0   1   0.0 0.0 25.0, 25.0 0.5
CC025/Geni f 29.7 0.36056   3 0.20817 0.0121 29.4, 30.1 0.94
CC026/Geni m 22.433 0.90738   3 0.52387 0.0404 21.6, 23.4 0.15
CC027/Geni f 22.1 0.0   1   0.0 0.0 22.1, 22.1 0.04
CC027/Geni m 25.25 0.35355   2   0.25 0.014 25.0, 25.5 0.54
CC030/Geni f 21.15 3.182   2   2.25 0.1504 18.9, 23.4 -0.07
CC031/Geni f 24.5 0.0   1   0.0 0.0 24.5, 24.5 0.33
CC031/Geni m 23.35 1.2021   2   0.85 0.0515 22.5, 24.2 0.27
CC032/Geni m 17.5 1.5588   3 0.9 0.0891 15.7, 18.4 -0.54
CC033/Geni f 16.6 1.7349   3 1.0017 0.1045 15.5, 18.6 -0.61
CC038/Geni f 25.1 0.14142   2   0.1 0.0056 25.0, 25.2 0.4
CC038/Geni m 26.4 0.0   1   0.0 0.0 26.4, 26.4 0.7
CC042/Geni m 33.433 0.90185   3 0.52068 0.027 32.5, 34.3 1.67
CC043/Geni m 40.1 1.9079   3 1.1015 0.0476 38.3, 42.1 2.6
CC056/Geni f 24.1 0.0   1   0.0 0.0 24.1, 24.1 0.28
CC056/Geni m 21.8 1.6971   2   1.2 0.0778 20.6, 23.0 0.06
CC061/Geni m 18.2 2.5942   3 1.4978 0.1425 16.1, 21.1 -0.44
CIV2_FE f 13.933 1.0599   3 0.61192 0.0761 12.8, 14.9 -0.92
DET3_GA m 12.333 0.83865   3 0.48419 0.068 11.8, 13.3 -1.25
DONNELL_HA f 16.35 3.0406   2   2.15 0.186 14.2, 18.5 -0.64
DONNELL_HA m 18.667 4.6436   3 2.681 0.2488 13.7, 22.9 -0.38
FIV_AC m 17.825 3.8595   4 1.9298 0.2165 13.8, 22.0 -0.49
FUF_HE f 25.233 4.4377   3 2.5621 0.1759 20.3, 28.9 0.41
GALASUPREME_CE m 27.9 0.96437   3 0.55678 0.0346 26.8, 28.6 0.91
GIT_GC f 40.0 0.0   1   0.0 0.0 40.0, 40.0 2.16
GIT_GC m 37.75 2.3335   2   1.65 0.0618 36.1, 39.4 2.27
HAX2_EF f 33.667 3.695   3 2.1333 0.1098 29.4, 35.8 1.41
HAZ_FE f 14.9 0.0   1   0.0 0.0 14.9, 14.9 -0.81
HAZ_FE m 15.65 2.8991   2   2.05 0.1852 13.6, 17.7 -0.79
HIP_GA f 15.5 0.0   1   0.0 0.0 15.5, 15.5 -0.74
HIP_GA m 17.65 2.8991   2   2.05 0.1643 15.6, 19.7 -0.52
HOE_GC f 18.2 0.0   1   0.0 0.0 18.2, 18.2 -0.42
HOE_GC m 15.65 3.182   2   2.25 0.2033 13.4, 17.9 -0.79
JUD_EF m 14.725 2.5695   4 1.2848 0.1745 12.5, 18.2 -0.92
KAV_AF f 9.77 0.11314   2   0.08 0.0116 9.69, 9.85 -1.41
KAV_AF m 9.8 0.0   1   0.0 0.0 9.8, 9.8 -1.61
LAM_DC f 19.0 0.0   1   0.0 0.0 19.0, 19.0 -0.32
LAM_DC m 20.1 6.6468   2   4.7 0.3307 15.4, 24.8 -0.18
LAT_HD f 16.26 2.5086   5 1.1219 0.1543 13.5, 19.1 -0.65
LAT_HD m 25.55 0.07071   2   0.05 0.0028 25.5, 25.6 0.58
LAX_FC f 19.2 0.0   1   0.0 0.0 19.2, 19.2 -0.3
LAX_FC m 19.3 0.0   1   0.0 0.0 19.3, 19.3 -0.29
LEL_FH m 11.45 1.4849   2   1.05 0.1297 10.4, 12.5 -1.38
LIP_BG f 20.05 1.1902   4 0.59512 0.0594 18.4, 21.2 -0.2
LIP_BG m 23.6 0.0   1   0.0 0.0 23.6, 23.6 0.31
LIV_DA f 22.8 0.0   1   0.0 0.0 22.8, 22.8 0.13
LIV_DA m 22.95 0.07071   2   0.05 0.0031 22.9, 23.0 0.22
LOD_AE f 12.667 2.928   3 1.6905 0.2312 10.0, 15.8 -1.07
LOM_BG m 21.833 1.4048   3 0.81104 0.0643 20.5, 23.3 0.06
LOT_FC f 42.817 2.9308   6 1.1965 0.0685 38.9, 46.5 2.49
LUF_AD m 15.222 5.9051   5 2.6408 0.3879 9.59, 22.1 -0.85
LUG_EH m 20.7 0.75498   3 0.43589 0.0365 19.9, 21.4 -0.09
LUV_DG m 20.05 9.5988   4 4.7994 0.4787 11.2, 28.7 -0.18
LUZ_FH f 29.65 4.0212   4 2.0106 0.1356 25.1, 34.1 0.94
LUZ_FH m 28.2 0.0   1   0.0 0.0 28.2, 28.2 0.95
MERCURI_HF m 34.233 0.70946   3 0.40961 0.0207 33.6, 35.0 1.78
NOD/ShiLtJ f 15.2 3.2527   2   2.3 0.214 12.9, 17.5 -0.77
NOD/ShiLtJ m 20.2 0.70711   2   0.5 0.035 19.7, 20.7 -0.16
NZO/HlLtJ f 21.5 3.1113   2   2.2 0.1447 19.3, 23.7 -0.03
NZO/HlLtJ m 22.85 0.21213   2   0.15 0.0093 22.7, 23.0 0.2
PAT_CD m 26.167 1.6921   3 0.97696 0.0647 24.3, 27.6 0.67
PEF_EC f 12.833 2.318   3 1.3383 0.1806 11.3, 15.5 -1.05
PEF_EC m 12.383 4.881   3 2.8181 0.3942 9.17, 18.0 -1.25
POH_DC f 34.767 4.1429   3 2.3919 0.1192 31.8, 39.5 1.54
PWK/PhJ f 20.2 1.2728   2   0.9 0.063 19.3, 21.1 -0.18
PWK/PhJ m 17.25 1.9092   2   1.35 0.1107 15.9, 18.6 -0.57
SEH_AH f 38.2 0.0   1   0.0 0.0 38.2, 38.2 1.95
SEH_AH m 34.35 1.1475   4 0.57373 0.0334 32.7, 35.3 1.8
STUCKY_HF f 34.733 3.0072   3 1.7362 0.0866 31.3, 36.9 1.54
STUCKY_HF m 31.5 0.0   1   0.0 0.0 31.5, 31.5 1.41
VIT_ED f 11.733 0.40415   3 0.23333 0.0344 11.3, 12.1 -1.18
VUX2_HF m 17.533 1.3317   3 0.76884 0.076 16.0, 18.4 -0.53
WAD f 26.0 5.0239   3 2.9006 0.1932 23.0, 31.8 0.5
WSB/EiJ f 13.815 6.3427   2   4.485 0.4591 9.33, 18.3 -0.94
WSB/EiJ m 13.4 0.56569   2   0.4 0.0422 13.0, 13.8 -1.11
XAD8_BG f 16.0 0.0   1   0.0 0.0 16.0, 16.0 -0.68
XAD8_BG m 17.933 1.4572   3 0.8413 0.0813 16.9, 19.6 -0.48
XAH3_GH m 30.4 3.3181   3 1.9157 0.1091 26.9, 33.5 1.25
XAS4_AF m 18.1 3.6373   3 2.1 0.201 14.2, 21.4 -0.45
XAV_AH m 31.7 2.0952   3 1.2097 0.0661 29.9, 34.0 1.43
XAW2_CD m 24.5 1.8385   2   1.3 0.075 23.2, 25.8 0.43
XEB2_AG f 14.833 0.81445   3 0.47022 0.0549 13.9, 15.4 -0.82
XEB2_AG m 18.767 0.90738   3 0.52387 0.0484 17.8, 19.6 -0.36
XEB_AF f 25.85 2.6163   2   1.85 0.1012 24.0, 27.7 0.49
XEB_AF m 23.0 0.0   1   0.0 0.0 23.0, 23.0 0.23
XEQ_EH m 13.8 0.26458   3 0.15275 0.0192 13.6, 14.1 -1.05
XXEN2_DC m 16.033 1.8771   3 1.0837 0.1171 14.0, 17.7 -0.74
XXEN3_DC f 18.7 0.0   1   0.0 0.0 18.7, 18.7 -0.36
XXEN3_DC m 17.6 0.0   1   0.0 0.0 17.6, 17.6 -0.52
YOX_DE m 16.067 0.23094   3 0.13333 0.0144 15.8, 16.2 -0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 15.75 2.4228 20.6637 10.8363
129S1/SvImJ m 17.55 2.4228 22.4637 12.6363
A/J f 13.25 2.4228 18.1637 8.3363
A/J m 14.8 2.4228 19.7137 9.8863
CAST/EiJ f 14.75 2.4228 19.6637 9.8363
CAST/EiJ m 14.85 2.4228 19.7637 9.9363
CC012/Geni f 18.4 1.9782 22.4121 14.3879
CC012/Geni m 19.92 1.5323 23.0277 16.8123
DONNELL_HA f 16.35 2.4228 21.2637 11.4363
DONNELL_HA m 18.6667 1.9782 22.6787 14.6546
LAT_HD f 16.26 1.5323 19.3677 13.1523
LAT_HD m 25.55 2.4228 30.4637 20.6363
NOD/ShiLtJ f 15.2 2.4228 20.1137 10.2863
NOD/ShiLtJ m 20.2 2.4228 25.1137 15.2863
NZO/HlLtJ f 21.5 2.4228 26.4137 16.5863
NZO/HlLtJ m 22.85 2.4228 27.7637 17.9363
PEF_EC f 12.8333 1.9782 16.8454 8.8213
PEF_EC m 12.3833 1.9782 16.3954 8.3713
PWK/PhJ f 20.2 2.4228 25.1137 15.2863
PWK/PhJ m 17.25 2.4228 22.1637 12.3363
WSB/EiJ f 13.815 2.4228 18.7287 8.9013
WSB/EiJ m 13.4 2.4228 18.3137 8.4863
XEB2_AG f 14.8333 1.9782 18.8454 10.8213
XEB2_AG m 18.7667 1.9782 22.7787 14.7546


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 16.65 1.7132 20.1245 13.1755
A/J both 14.025 1.7132 17.4995 10.5505
CAST/EiJ both 14.8 1.7132 18.2745 11.3255
CC012/Geni both 19.16 1.2511 21.6974 16.6226
DONNELL_HA both 17.5083 1.5639 20.6801 14.3365
LAT_HD both 20.905 1.4334 23.812 17.998
NOD/ShiLtJ both 17.7 1.7132 21.1745 14.2255
NZO/HlLtJ both 22.175 1.7132 25.6495 18.7005
PEF_EC both 12.6083 1.3988 15.4453 9.7714
PWK/PhJ both 18.725 1.7132 22.1995 15.2505
WSB/EiJ both 13.6075 1.7132 17.082 10.133
XEB2_AG both 16.8 1.3988 19.637 13.963




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA