Project measure / variable:   Graham1   Ifit1_spleen_d12

ID, description, units MPD:63397   Ifit1_spleen_d12   Ifit1 gene expression in spleen, fold change compared to matched control, post infection    day 12  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifit1 gene expression in spleen, fold change compared to matched control, post infection day 12



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means2.3187   None
Median of the strain means1.5311   None
SD of the strain means± 1.1606
Coefficient of variation (CV)0.5005
Min–max range of strain means1.4414   –   3.7569   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 1.5311 0.0   1   0.0 0.0 1.531086041, 1.531086041 -0.68
RIX:CC(005 x 001) m 3.4077 0.0   1   0.0 0.0 3.407652115, 3.407652115 0.94
RIX:CC(017 x 004) m 1.4563 0.0   1   0.0 0.0 1.456325623, 1.456325623 -0.74
RIX:CC(024 x 023) m 3.7569 0.0   1   0.0 0.0 3.756932572, 3.756932572 1.24
RIX:CC(041 x 012) m 1.4414 0.0   1   0.0 0.0 1.441373718, 1.441373718 -0.76




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA