Project measure / variable:   Graham1   Ifit1_spleen_d4

ID, description, units MPD:63395   Ifit1_spleen_d4   Ifit1 gene expression in spleen, fold change compared to matched control, post infection    day 4  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifit1 gene expression in spleen, fold change compared to matched control, post infection day 4

RIX:CC(004 x 011)RIX:CC(017 x 004)RIX:CC(024 x 023)RIX:CC(041 x 012)RIX:CC(005 x 001) (no units) 10152025303540455055femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means28.501   None
Median of the strain means23.556   None
SD of the strain means± 17.312
Coefficient of variation (CV)0.6074
Min–max range of strain means11.409   –   57.1   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
RIX:CC(004 x 011) m 57.1 0.0   1   0.0 0.0 57.10100942, 57.10100942 1.65
RIX:CC(005 x 001) m 11.409 0.0   1   0.0 0.0 11.40908038, 11.40908038 -0.99
RIX:CC(017 x 004) m 29.848 0.0   1   0.0 0.0 29.84786515, 29.84786515 0.08
RIX:CC(024 x 023) m 23.556 0.0   1   0.0 0.0 23.55563209, 23.55563209 -0.29
RIX:CC(041 x 012) m 20.59 0.0   1   0.0 0.0 20.59024211, 20.59024211 -0.46




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA