Project measure / variable:   Graham1   Ifit1_brain_d4

ID, description, units MPD:63387   Ifit1_brain_d4   Ifit1 gene expression in brain, fold change compared to matched control, post infection    day 4  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifit1 gene expression in brain, fold change compared to matched control, post infection day 4



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means10.626   None
Median of the strain means8.4796   None
SD of the strain means± 4.9555
Coefficient of variation (CV)0.4664
Min–max range of strain means7.1382   –   19.21   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 19.21 0.0   1   0.0 0.0 19.20989083, 19.20989083 1.73
RIX:CC(005 x 001) m 10.457 0.0   1   0.0 0.0 10.45654176, 10.45654176 -0.03
RIX:CC(017 x 004) m 7.1382 0.0   1   0.0 0.0 7.138172465, 7.138172465 -0.7
RIX:CC(024 x 023) m 7.8432 0.0   1   0.0 0.0 7.843208887, 7.843208887 -0.56
RIX:CC(041 x 012) m 8.4796 0.0   1   0.0 0.0 8.479622267, 8.479622267 -0.43




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA