Project measure / variable:   Graham1   Ifnb1_spleen_d4

ID, description, units MPD:63384   Ifnb1_spleen_d4   Ifnb1 gene expression in spleen, fold change compared to matched control, post infection    day 4  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifnb1 gene expression in spleen, fold change compared to matched control, post infection day 4



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means0.92535   None
Median of the strain means0.70703   None
SD of the strain means± 0.63944
Coefficient of variation (CV)0.691
Min–max range of strain means0.43648   –   2.025   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 2.025 0.0   1   0.0 0.0 2.02495295, 2.02495295 1.72
RIX:CC(005 x 001) m 0.90605 0.0   1   0.0 0.0 0.906052296, 0.906052296 -0.03
RIX:CC(017 x 004) m 0.70703 0.0   1   0.0 0.0 0.707025402, 0.707025402 -0.34
RIX:CC(024 x 023) m 0.55218 0.0   1   0.0 0.0 0.552184696, 0.552184696 -0.58
RIX:CC(041 x 012) m 0.43648 0.0   1   0.0 0.0 0.436483796, 0.436483796 -0.76




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA