Project measure / variable:   Graham1   Ifnb1_spleen_d2

ID, description, units MPD:63383   Ifnb1_spleen_d2   Ifnb1 gene expression in spleen, fold change compared to matched control, post infection    day 2  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means1.6179   None
Median of the strain means0.82868   None
SD of the strain means± 1.9993
Coefficient of variation (CV)1.2357
Min–max range of strain means0.42438   –   5.1806   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
RIX:CC(004 x 011) m 0.82868 0.0   1   0.0 0.0 0.828680924, 0.828680924 -0.39
RIX:CC(005 x 001) m 5.1806 0.0   1   0.0 0.0 5.180568607, 5.180568607 1.78
RIX:CC(017 x 004) m 0.81957 0.0   1   0.0 0.0 0.819573233, 0.819573233 -0.4
RIX:CC(024 x 023) m 0.42438 0.0   1   0.0 0.0 0.424384865, 0.424384865 -0.6
RIX:CC(041 x 012) m 0.83631 0.0   1   0.0 0.0 0.836310807, 0.836310807 -0.39




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA