Project measure / variable:   Graham1   Ifnb1_brain_d12

ID, description, units MPD:63378   Ifnb1_brain_d12   Ifnb1 gene expression in brain, fold change compared to matched control, post infection    day 12  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifnb1 gene expression in brain, fold change compared to matched control, post infection day 12



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means386.2   None
Median of the strain means19.986   None
SD of the strain means± 697.2
Coefficient of variation (CV)1.8052
Min–max range of strain means1.2535   –   1614.0   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 19.986 0.0   1   0.0 0.0 19.98560829, 19.98560829 -0.53
RIX:CC(005 x 001) m 1614.0 0.0   1   0.0 0.0 1614.145792, 1614.145792 1.76
RIX:CC(017 x 004) m 4.7722 0.0   1   0.0 0.0 4.772239805, 4.772239805 -0.55
RIX:CC(024 x 023) m 291.1 0.0   1   0.0 0.0 291.0698436, 291.0698436 -0.14
RIX:CC(041 x 012) m 1.2535 0.0   1   0.0 0.0 1.25353302, 1.25353302 -0.55




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA