Project measure / variable:   Graham1   Ifnb1_brain_d4

ID, description, units MPD:63376   Ifnb1_brain_d4   Ifnb1 gene expression in brain, fold change compared to matched control, post infection    day 4  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - Ifnb1 gene expression in brain, fold change compared to matched control, post infection day 4



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means0.77373   None
Median of the strain means0.62196   None
SD of the strain means± 0.41204
Coefficient of variation (CV)0.5325
Min–max range of strain means0.25547   –   1.2564   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 0.62196 0.0   1   0.0 0.0 0.621957998, 0.621957998 -0.37
RIX:CC(005 x 001) m 0.6057 0.0   1   0.0 0.0 0.605696536, 0.605696536 -0.41
RIX:CC(017 x 004) m 1.2564 0.0   1   0.0 0.0 1.256432436, 1.256432436 1.17
RIX:CC(024 x 023) m 1.1291 0.0   1   0.0 0.0 1.129050878, 1.129050878 0.86
RIX:CC(041 x 012) m 0.25547 0.0   1   0.0 0.0 0.255469368, 0.255469368 -1.26




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA