Project measure / variable:   Graham1   WNV_brain_d7

ID, description, units MPD:63366   WNV_brain_d7   virus in brain, fold change compared to matched control, post infection    day 7  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure RNA expression profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - virus in brain, fold change compared to matched control, post infection day 7

RIX:CC(024 x 023)RIX:CC(005 x 001)RIX:CC(004 x 011)RIX:CC(017 x 004)RIX:CC(041 x 012) (no units) -1000100200300400500600femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means127.8   None
Median of the strain means1.5397   None
SD of the strain means± 267.2
Coefficient of variation (CV)2.0909
Min–max range of strain means0.66629   –   605.3   None
Mean sample size per strain1.0   mice


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
RIX:CC(004 x 011) m 1.5397 0.0   1   0.0 0.0 1.539718568, 1.539718568 -0.47
RIX:CC(005 x 001) m 30.588 0.0   1   0.0 0.0 30.58790674, 30.58790674 -0.36
RIX:CC(017 x 004) m 0.94268 0.0   1   0.0 0.0 0.942675316, 0.942675316 -0.47
RIX:CC(024 x 023) m 605.3 0.0   1   0.0 0.0 605.3203773, 605.3203773 1.79
RIX:CC(041 x 012) m 0.66629 0.0   1   0.0 0.0 0.666290035, 0.666290035 -0.48




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA