Project measure / variable:   Graham1   Treg_spleen_d28

ID, description, units MPD:63344   Treg_spleen_d28   percentage of CD4+ T cells that are Foxp3+ in the spleen, post infection   [%]  day 28  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD4+ T cells that are Foxp3+ in the spleen, post infection day 28



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means8.0934   %
Median of the strain means8.0934   %
SD of the strain means± 2.4419
Coefficient of variation (CV)0.3017
Min–max range of strain means6.3667   –   9.82   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 17.8883 17.8883 2.9929 0.1587
Residuals 4 23.9073 5.9768


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 9.82 3.17   3 1.8302 0.3228 6.16, 11.7 0.71
RIX:CC(041 x 012) m 6.3667 1.38   3 0.79675 0.2168 4.81, 7.44 -0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 9.82 1.411478736 13.7388932277 5.9011067723
RIX:CC(041 x 012) m 6.3666666667 1.411478736 10.2855598944 2.447773439




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA