Project measure / variable:   Graham1   Treg_spleen_d21

ID, description, units MPD:63343   Treg_spleen_d21   percentage of CD4+ T cells that are Foxp3+ in the spleen, post infection   [%]  day 21  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD4+ T cells that are Foxp3+ in the spleen, post infection day 21



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means8.1267   %
Median of the strain means8.1267   %
SD of the strain means± 1.7961
Coefficient of variation (CV)0.221
Min–max range of strain means6.8567   –   9.3967   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 9.6774 9.6774 2.7579 0.1721
Residuals 4 14.0361 3.509


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 6.8567 0.70571   3 0.40744 0.1029 6.05, 7.36 -0.71
RIX:CC(041 x 012) m 9.3967 2.5534   3 1.4742 0.2717 7.5, 12.3 0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 6.8566666667 1.0815164251 9.8594376513 3.853895682
RIX:CC(041 x 012) m 9.3966666667 1.0815164251 12.3994376513 6.393895682




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA