Project measure / variable:   Graham1   Treg_spleen_d12

ID, description, units MPD:63342   Treg_spleen_d12   percentage of CD4+ T cells that are Foxp3+ in the spleen, post infection   [%]  day 12  
West Nile virus study
Data set, strains Graham1   CC RIX   2 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD4+ T cells that are Foxp3+ in the spleen, post infection day 12



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested2 strains
Mean of the strain means6.6784   %
Median of the strain means6.6784   %
SD of the strain means± 2.6422
Coefficient of variation (CV)0.3956
Min–max range of strain means4.81   –   8.5467   %
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 1 20.944 20.944 105.4229 0.0005
Residuals 4 0.7947 0.1987


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 4.81 0.57236   3 0.33045 0.119 4.15, 5.17 -0.71
RIX:CC(041 x 012) m 8.5467 0.26407   3 0.15246 0.0309 8.26, 8.78 0.71


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 4.81 0.2573367875 5.5244814642 4.0955185358
RIX:CC(041 x 012) m 8.5466666667 0.2573367875 9.2611481308 7.8321852025




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA