Project measure / variable:   Graham1   Treg_brain_d21

ID, description, units MPD:63339   Treg_brain_d21   percentage of CD4+ T cells that are Foxp3+ in the brain, post infection   [%]  day 21  
West Nile virus study
Data set, strains Graham1   CC RIX   4 strains     sex: m     age: 8-10wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Graham1 - percentage of CD4+ T cells that are Foxp3+ in the brain, post infection day 21



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested4 strains
Mean of the strain means14.737   %
Median of the strain means11.756   %
SD of the strain means± 12.374
Coefficient of variation (CV)0.8397
Min–max range of strain means3.8333   –   31.6   %
Mean sample size per strain2.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 1067.7537 355.9179 39.8464 0.0001
Residuals 7 62.5257 8.9322


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 7.38 1.645   3 0.94975 0.2229 5.74, 9.03 -0.59
RIX:CC(005 x 001) m 31.6 5.6569   2   4.0 0.179 27.6, 35.6 1.36
RIX:CC(017 x 004) m 3.8333 1.8851   3 1.0883 0.4918 1.94, 5.71 -0.88
RIX:CC(041 x 012) m 16.133 3.0006   3 1.7324 0.186 13.5, 19.4 0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 7.38 1.7255 11.4602 3.2998
RIX:CC(005 x 001) m 31.6 2.1133 36.5972 26.6028
RIX:CC(017 x 004) m 3.8333 1.7255 7.9135 -0.2469
RIX:CC(041 x 012) m 16.1333 1.7255 20.2135 12.0531




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA