Project measure / variable:   Graham1   clin_score_d20

ID, description, units MPD:63326   clin_score_d20   clinical score (0=healthy, 1=lethargic, 2=altered gait, 3=no movement, 4=moribund), post infection   [score]  day 20  
West Nile virus study
Data set, strains Graham1   CC RIX   5 strains     sex: m     age: 8-10wks
Procedure health assessment
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  STRAIN COMPARISON PLOT
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Graham1 - clinical score (0=healthy, 1=lethargic, 2=altered gait, 3=no movement, 4=moribund), post infection day 20



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means0.0   score
Median of the strain means0.0   score
SD of the strain means± 0.0
Coefficient of variation (CV)0.0
Min–max range of strain means0.0   –   0.0   score
Mean sample size per strain4.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 3 0.0 0.0
Residuals 17 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(004 x 011) m 0.0 0.0   6 0.0 None 0.0
RIX:CC(005 x 001) m 0.0 0.0   3 0.0 None 0.0
RIX:CC(017 x 004) m 0.0 0.0   6 0.0 None 0.0
RIX:CC(024 x 023) m 0.0 0.0   1   0.0 None 0.0
RIX:CC(041 x 012) m 0.0 0.0   6 0.0 None 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(004 x 011) m 0.0 0.0 0.0 0.0
RIX:CC(005 x 001) m 0.0 0.0 0.0 0.0
RIX:CC(017 x 004) m 0.0 0.0 0.0 0.0
RIX:CC(041 x 012) m 0.0 0.0 0.0 0.0




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA