Project measure / variable:   CSNA02   pokes_corr_rev

ID, description, units MPD:62209   pokes_corr_rev   number of anticipatory nose pokes made in correct flanking hole during reversal learning   [n]  reversal  
Data set, strains CSNA02   inbred   10 strains     sex: both     age: 12-14wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA02 - number of anticipatory nose pokes made in correct flanking hole during reversal learning reversal



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means1.0359   n 0.72695   n
Median of the strain means0.81917   n 0.70833   n
SD of the strain means± 0.63838 ± 0.28663
Coefficient of variation (CV)0.6162 0.3943
Min–max range of strain means0.40333   –   2.2029   n 0.22667   –   1.202   n
Mean sample size per strain5.3   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.2385 2.2385 3.5747 0.0623
strain 9 15.0803 1.6756 2.6757 0.0091
sex:strain 9 8.9425 0.9936 1.5867 0.1337
Residuals 79 49.4717 0.6262


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.40333 0.2052   6 0.08377 0.5088 0.06, 0.6 -0.99
129S1/SvImJ m 0.89 0.5567   6 0.22727 0.6255 0.15, 1.74 0.57
A/J f 1.42 0.78725   6 0.32139 0.5544 0.47, 2.52 0.6
A/J m 0.845 0.45934   6 0.18752 0.5436 0.31, 1.66 0.41
C57BL/6J f 0.96833 0.55243   6 0.22553 0.5705 0.48, 1.87 -0.11
C57BL/6J m 0.80667 0.44067   6 0.1799 0.5463 0.35, 1.32 0.28
CAST/EiJ f 0.56143 0.52397   7 0.19804 0.9333 0.17, 1.65 -0.74
CAST/EiJ m 0.4975 0.43706   4 0.21853 0.8785 0.09, 0.9 -0.8
CC004/TauUncJ f 0.67 0.72125   2   0.51 1.0765 0.16, 1.18 -0.57
CC004/TauUncJ m 1.0467 0.50013   3 0.28875 0.4778 0.7, 1.62 1.12
CC041/TauUncJ f 1.92 1.3588   3 0.7845 0.7077 0.38, 2.95 1.38
CC041/TauUncJ m 0.56 0.22627   2   0.16 0.4041 0.4, 0.72 -0.58
NOD/ShiLtJ f 1.218 0.86725   5 0.38785 0.712 0.37, 2.65 0.29
NOD/ShiLtJ m 1.202 0.84609   5 0.37838 0.7039 0.49, 2.3 1.66
NZO/HlLtJ f 2.2029 2.0255   7 0.76555 0.9195 0.12, 5.31 1.83
NZO/HlLtJ m 0.61 0.41817   4 0.20909 0.6855 0.18, 1.18 -0.41
PWK/PhJ f 0.48333 0.55759   6 0.22764 1.1536 0.03, 1.5 -0.87
PWK/PhJ m 0.22667 0.23432   6 0.09566 1.0338 0.05, 0.67 -1.75
WSB/EiJ f 0.512 0.3045   5 0.13618 0.5947 0.25, 0.98 -0.82
WSB/EiJ m 0.585 0.537   4 0.2685 0.9179 0.24, 1.38 -0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.4033 0.3231 1.0464 -0.2397
129S1/SvImJ m 0.89 0.3231 1.533 0.247
A/J f 1.42 0.3231 2.063 0.777
A/J m 0.845 0.3231 1.488 0.202
C57BL/6J f 0.9683 0.3231 1.6114 0.3253
C57BL/6J m 0.8067 0.3231 1.4497 0.1636
CAST/EiJ f 0.5614 0.2991 1.1568 -0.0339
CAST/EiJ m 0.4975 0.3957 1.2851 -0.2901
CC004/TauUncJ f 0.67 0.5596 1.7838 -0.4438
CC004/TauUncJ m 1.0467 0.4569 1.9561 0.1373
CC041/TauUncJ f 1.92 0.4569 2.8294 1.0106
CC041/TauUncJ m 0.56 0.5596 1.6738 -0.5538
NOD/ShiLtJ f 1.218 0.3539 1.9224 0.5136
NOD/ShiLtJ m 1.202 0.3539 1.9064 0.4976
NZO/HlLtJ f 2.2029 0.2991 2.7982 1.6075
NZO/HlLtJ m 0.61 0.3957 1.3976 -0.1776
PWK/PhJ f 0.4833 0.3231 1.1264 -0.1597
PWK/PhJ m 0.2267 0.3231 0.8697 -0.4164
WSB/EiJ f 0.512 0.3539 1.2164 -0.1924
WSB/EiJ m 0.585 0.3957 1.3726 -0.2026


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.6467 0.2284 1.1014 0.192
A/J both 1.1325 0.2284 1.5872 0.6778
C57BL/6J both 0.8875 0.2284 1.3422 0.4328
CAST/EiJ both 0.5295 0.248 1.0231 0.0358
CC004/TauUncJ both 0.8583 0.3612 1.5773 0.1394
CC041/TauUncJ both 1.24 0.3612 1.9589 0.5211
NOD/ShiLtJ both 1.21 0.2502 1.7081 0.7119
NZO/HlLtJ both 1.4064 0.248 1.9001 0.9128
PWK/PhJ both 0.355 0.2284 0.8097 -0.0997
WSB/EiJ both 0.5485 0.2654 1.0768 0.0202




  GWAS USING LINEAR MIXED MODELS