Project measure / variable:   CSNA02   pokes_corr_acq

ID, description, units MPD:62208   pokes_corr_acq   number of anticipatory nose pokes made in correct flanking hole during reversal learning   [n]  acquisition  
Data set, strains CSNA02   inbred   10 strains     sex: both     age: 12-14wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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CSNA02 - number of anticipatory nose pokes made in correct flanking hole during reversal learning acquisition



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means0.66806   n 0.55624   n
Median of the strain means0.59834   n 0.5245   n
SD of the strain means± 0.47387 ± 0.25274
Coefficient of variation (CV)0.7093 0.4544
Min–max range of strain means0.15333   –   1.7286   n 0.1575   –   1.0267   n
Mean sample size per strain5.3   mice 4.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.3178 0.3178 0.8026 0.373
strain 9 10.7461 1.194 3.0154 0.0038
sex:strain 9 5.0724 0.5636 1.4233 0.1922
Residuals 80 31.6776 0.396


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.61667 0.63661   6 0.25989 1.0323 0.12, 1.82 -0.11
129S1/SvImJ m 0.78 0.71285   6 0.29102 0.9139 0.15, 2.01 0.89
A/J f 0.99833 0.63383   6 0.25876 0.6349 0.41, 2.19 0.7
A/J m 1.0267 0.54427   6 0.2222 0.5301 0.45, 1.75 1.86
C57BL/6J f 0.58 0.34785   6 0.14201 0.5997 0.2, 1.21 -0.19
C57BL/6J m 0.34167 0.24766   6 0.10111 0.7249 0.04, 0.64 -0.85
CAST/EiJ f 0.16571 0.05563   7 0.02103 0.3357 0.1, 0.25 -1.06
CAST/EiJ m 0.1575 0.11236   4 0.05618 0.7134 0.01, 0.25 -1.58
CC004/TauUncJ f 0.48 0.35355   2   0.25 0.7366 0.23, 0.73 -0.4
CC004/TauUncJ m 0.70667 0.38889   3 0.22452 0.5503 0.29, 1.06 0.6
CC041/TauUncJ f 0.98 1.3555   3 0.78258 1.3831 0.09, 2.54 0.66
CC041/TauUncJ m 0.70333 0.03215   3 0.01856 0.0457 0.68, 0.74 0.58
NOD/ShiLtJ f 0.666 0.4561   5 0.20398 0.6848 0.24, 1.16 0.0
NOD/ShiLtJ m 0.494 0.46506   5 0.20798 0.9414 -0.25
NZO/HlLtJ f 1.7286 1.5499   7 0.5858 0.8966 0.22, 4.75 2.24
NZO/HlLtJ m 0.4175 0.23585   4 0.11792 0.5649 0.19, 0.7 -0.55
PWK/PhJ f 0.15333 0.16801   6 0.06859 1.0957 -1.09
PWK/PhJ m 0.555 0.59568   6 0.24318 1.0733 0.1, 1.62 0.0
WSB/EiJ f 0.312 0.20741   5 0.09276 0.6648 0.09, 0.63 -0.75
WSB/EiJ m 0.38 0.24779   4 0.1239 0.6521 0.02, 0.58 -0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.6167 0.2569 1.1279 0.1054
129S1/SvImJ m 0.78 0.2569 1.2912 0.2688
A/J f 0.9983 0.2569 1.5096 0.4871
A/J m 1.0267 0.2569 1.5379 0.5154
C57BL/6J f 0.58 0.2569 1.0912 0.0688
C57BL/6J m 0.3417 0.2569 0.8529 -0.1696
CAST/EiJ f 0.1657 0.2378 0.639 -0.3076
CAST/EiJ m 0.1575 0.3146 0.7836 -0.4686
CC004/TauUncJ f 0.48 0.445 1.3655 -0.4055
CC004/TauUncJ m 0.7067 0.3633 1.4297 -0.0163
CC041/TauUncJ f 0.98 0.3633 1.703 0.257
CC041/TauUncJ m 0.7033 0.3633 1.4263 -0.0197
NOD/ShiLtJ f 0.666 0.2814 1.226 0.106
NOD/ShiLtJ m 0.494 0.2814 1.054 -0.066
NZO/HlLtJ f 1.7286 0.2378 2.2019 1.2553
NZO/HlLtJ m 0.4175 0.3146 1.0436 -0.2086
PWK/PhJ f 0.1533 0.2569 0.6646 -0.3579
PWK/PhJ m 0.555 0.2569 1.0662 0.0438
WSB/EiJ f 0.312 0.2814 0.872 -0.248
WSB/EiJ m 0.38 0.3146 1.0061 -0.2461


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.6983 0.1817 1.0598 0.3368
A/J both 1.0125 0.1817 1.374 0.651
C57BL/6J both 0.4608 0.1817 0.8223 0.0993
CAST/EiJ both 0.1616 0.1972 0.5541 -0.2308
CC004/TauUncJ both 0.5933 0.2872 1.1649 0.0218
CC041/TauUncJ both 0.8417 0.2569 1.3529 0.3304
NOD/ShiLtJ both 0.58 0.199 0.976 0.184
NZO/HlLtJ both 1.073 0.1972 1.4655 0.6806
PWK/PhJ both 0.3542 0.1817 0.7157 -0.0073
WSB/EiJ both 0.346 0.2111 0.766 -0.074




  GWAS USING LINEAR MIXED MODELS