Phenotype measure:   Peters1   PLT

ID, description, units MPD:6219   PLT   platelet count (PLT; units per volume x 103)   [n/µL]
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters1 - platelet count (PLT; units per volume x 103)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means1048   n/µL 1186   n/µL
Median of the strain means1035   n/µL 1123   n/µL
SD of the strain means± 290 ± 285
Coefficient of variation (CV)0.276 0.240
Min–max range of strain means312   –   1904   n/µL 670   –   1701   n/µL
Mean sample size per strain11.8   mice 11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4606945.9572 4606945.9572 66.0836 < 0.0001
strain 42 70631302.8098 1681697.6859 24.1228 < 0.0001
sex:strain 42 11017954.834 262332.258 3.763 < 0.0001
Residuals 923 64345947.0134 69713.9188


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 801.0 111.0   14 29.6 0.138 518.0, 951.0 -0.85
129S1/SvImJ m 876.0 173.0   15 44.8 0.198 551.0, 1140.0 -1.09
A/J f 1034.0 66.3   10 21.0 0.0641 941.0, 1170.0 -0.05
A/J m 810.0 150.0   10 47.4 0.185 623.0, 1120.0 -1.32
AKR/J f 918.0 252.0   10 79.8 0.275 652.0, 1450.0 -0.45
AKR/J m 781.0 188.0   9 62.7 0.241 541.0, 1100.0 -1.42
BALB/cByJ f 1017.0 338.0   15 87.2 0.332 721.0, 1770.0 -0.11
BALB/cByJ m 1159.0 340.0   29 63.2 0.293 728.0, 1740.0 -0.09
BALB/cJ f 1066.0 120.0   11 36.2 0.113 905.0, 1300.0 0.06
BALB/cJ m 1449.0 440.0   5 197.0 0.304 983.0, 2030.0 0.92
BTBR T+ Itpr3tf/J f 1549.0 234.0   10 73.9 0.151 1180.0, 2050.0 1.73
BTBR T+ Itpr3tf/J m 1514.0 160.0   10 50.6 0.106 1260.0, 1800.0 1.15
BUB/BnJ f 1083.0 325.0   14 86.7 0.3 623.0, 1610.0 0.12
BUB/BnJ m 1229.0 308.0   10 97.4 0.251 822.0, 1810.0 0.15
C3H/HeJ f 927.0 129.0   10 40.8 0.139 680.0, 1100.0 -0.42
C3H/HeJ m 1123.0 344.0   10 109.0 0.306 711.0, 2000.0 -0.22
C57BL/10J f 737.0 217.0   21 47.4 0.295 387.0, 1300.0 -1.07
C57BL/10J m 1075.0 241.0   15 62.1 0.224 793.0, 1640.0 -0.39
C57BL/6J f 1163.0 219.0   11 66.1 0.188 843.0, 1530.0 0.4
C57BL/6J m 1282.0 437.0   11 132.0 0.341 500.0, 1780.0 0.34
C57BLKS/J f 1267.0 249.0   10 78.6 0.196 821.0, 1500.0 0.76
C57BLKS/J m 1428.0 261.0   10 82.6 0.183 865.0, 1720.0 0.85
C57BR/cdJ f 932.0 184.0   10 58.3 0.198 760.0, 1260.0 -0.4
C57BR/cdJ m 1018.0 306.0   12 88.5 0.301 211.0, 1490.0 -0.59
C57L/J f 677.0 196.0   12 56.6 0.29 364.0, 1080.0 -1.28
C57L/J m 959.0 212.0   15 54.7 0.221 657.0, 1320.0 -0.8
C58/J f 853.0 214.0   11 64.4 0.25 388.0, 1250.0 -0.67
C58/J m 978.0 141.0   9 47.0 0.144 749.0, 1150.0 -0.73
CAST/EiJ f 1073.0 141.0   12 40.7 0.131 925.0, 1290.0 0.09
CAST/EiJ m 1541.0 388.0   11 117.0 0.252 1060.0, 2180.0 1.25
CBA/J f 910.0 80.6   9 26.9 0.0885 748.0, 1030.0 -0.47
CBA/J m 999.0 108.0   10 34.1 0.108 784.0, 1130.0 -0.66
CE/J f 952.0 297.0   13 82.4 0.312 450.0, 1350.0 -0.33
CE/J m 1052.0 333.0   8 118.0 0.316 320.0, 1380.0 -0.47
CZECHII/EiJ f 1014.0 382.0   11 115.0 0.376 688.0, 2000.0 -0.12
CZECHII/EiJ m 1201.0 295.0   11 89.1 0.246 836.0, 1810.0 0.05
DBA/1J f 871.0 183.0   14 48.9 0.21 611.0, 1230.0 -0.61
DBA/1J m 670.0 199.0   11 59.9 0.296 211.0, 859.0 -1.81
DBA/2J f 933.0 141.0   13 39.1 0.151 756.0, 1280.0 -0.4
DBA/2J m 950.0 220.0   10 69.6 0.232 541.0, 1360.0 -0.83
FVB/NJ f 1102.0 203.0   12 58.5 0.184 790.0, 1450.0 0.19
FVB/NJ m 1303.0 144.0   12 41.7 0.111 1100.0, 1550.0 0.41
I/LnJ f 931.0 166.0   13 46.1 0.179 695.0, 1230.0 -0.4
I/LnJ m 1681.0 284.0   14 76.0 0.169 1120.0, 2130.0 1.74
JF1/MsJ f 1233.0 374.0   12 108.0 0.303 553.0, 1980.0 0.64
JF1/MsJ m 1624.0 423.0   16 106.0 0.261 935.0, 2690.0 1.54
KK/HlJ f 312.0 84.7   14 22.6 0.272 225.0, 520.0 -2.54
KK/HlJ m 704.0 126.0   11 38.0 0.179 499.0, 933.0 -1.69
LP/J f 1044.0 170.0   15 43.8 0.162 821.0, 1530.0 -0.01
LP/J m 1101.0 303.0   10 95.7 0.275 714.0, 1520.0 -0.3
MA/MyJ f 1078.0 262.0   12 75.8 0.243 639.0, 1550.0 0.11
MA/MyJ m 1180.0 183.0   13 50.8 0.155 906.0, 1470.0 -0.02
MOLF/EiJ f 1147.0 333.0   13 92.4 0.291 560.0, 1490.0 0.34
MOLF/EiJ m 1133.0 374.0   15 96.6 0.331 525.0, 1710.0 -0.19
MSM/MsJ f 1097.0 196.0   11 59.1 0.179 870.0, 1510.0 0.17
MSM/MsJ m 1541.0 243.0   11 73.3 0.158 1110.0, 1870.0 1.25
NOD/ShiLtJ f 1092.0 212.0   10 66.9 0.194 840.0, 1380.0 0.15
NOD/ShiLtJ m 1457.0 230.0   10 72.6 0.158 1180.0, 1950.0 0.95
NON/ShiLtJ f 1035.0 234.0   10 74.0 0.226 529.0, 1340.0 -0.04
NON/ShiLtJ m 1057.0 279.0   10 88.1 0.264 551.0, 1410.0 -0.45
NZB/BlNJ f 1324.0 127.0   12 36.7 0.0961 1150.0, 1520.0 0.95
NZB/BlNJ m 1359.0 311.0   9 104.0 0.229 791.0, 1780.0 0.61
NZW/LacJ f 1275.0 121.0   12 34.8 0.0946 1080.0, 1470.0 0.79
NZW/LacJ m 1599.0 188.0   10 59.6 0.118 1370.0, 1960.0 1.45
PERA/EiJ f 1709.0 450.0   11 136.0 0.263 961.0, 2410.0 2.28
PERA/EiJ m 1701.0 450.0   8 159.0 0.264 1140.0, 2340.0 1.81
PL/J f 1904.0 235.0   16 58.6 0.123 1260.0, 2110.0 2.96
PL/J m 1678.0 469.0   10 148.0 0.28 1120.0, 2640.0 1.73
PWK/PhJ f 727.0 169.0   13 46.9 0.233 529.0, 1210.0 -1.11
PWK/PhJ m 892.0 110.0   12 31.6 0.123 667.0, 1060.0 -1.03
RF/J f 1216.0 269.0   10 85.2 0.222 780.0, 1790.0 0.58
RF/J m 1056.0 382.0   16 95.6 0.362 637.0, 2100.0 -0.46
RIIIS/J f 1118.0 469.0   11 141.0 0.419 166.0, 1610.0 0.24
RIIIS/J m 1166.0 349.0   16 87.1 0.299 418.0, 1620.0 -0.07
SEA/GnJ f 1253.0 127.0   10 40.3 0.102 1050.0, 1450.0 0.71
SEA/GnJ m 1077.0 177.0   8 62.7 0.165 756.0, 1270.0 -0.38
SJL/J f 524.0 206.0   8 72.9 0.394 160.0, 765.0 -1.81
SJL/J m 1025.0 400.0   14 107.0 0.391 538.0, 1910.0 -0.56
SM/J f 788.0 188.0   11 56.7 0.239 474.0, 1020.0 -0.9
SM/J m 802.0 277.0   10 87.7 0.346 60.2, 1070.0 -1.35
SPRET/EiJ f 1022.0 205.0   11 61.8 0.201 790.0, 1330.0 -0.09
SPRET/EiJ m 1055.0 195.0   11 58.9 0.185 703.0, 1330.0 -0.46
SWR/J f 781.0 144.0   13 40.0 0.185 570.0, 1080.0 -0.92
SWR/J m 1088.0 286.0   11 86.1 0.263 643.0, 1570.0 -0.34
WSB/EiJ f 1555.0 234.0   11 70.6 0.151 1250.0, 2010.0 1.75
WSB/EiJ m 1616.0 218.0   9 72.6 0.135 1280.0, 2020.0 1.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 801.3571 70.566 939.8456 662.8687
129S1/SvImJ m 875.7333 68.1733 1009.5259 741.9407
A/J f 1033.8 83.4949 1197.6618 869.9382
A/J m 810.0 83.4949 973.8618 646.1382
AKR/J f 918.5 83.4949 1082.3618 754.6382
AKR/J m 781.4444 88.0113 954.1699 608.7189
BALB/cByJ f 1017.2 68.1733 1150.9926 883.4074
BALB/cByJ m 1159.3448 49.0299 1255.5678 1063.1219
BALB/cJ f 1065.8182 79.6092 1222.0543 909.5821
BALB/cJ m 1448.6 118.0796 1680.3356 1216.8644
BTBR T+ Itpr3tf/J f 1549.0 83.4949 1712.8618 1385.1382
BTBR T+ Itpr3tf/J m 1514.0 83.4949 1677.8618 1350.1382
BUB/BnJ f 1083.4286 70.566 1221.9171 944.9401
BUB/BnJ m 1228.8 83.4949 1392.6618 1064.9382
C3H/HeJ f 927.1 83.4949 1090.9618 763.2382
C3H/HeJ m 1122.7 83.4949 1286.5618 958.8382
C57BL/10J f 736.5238 57.6169 849.5992 623.4484
C57BL/10J m 1075.2667 68.1733 1209.0593 941.4741
C57BL/6J f 1163.3636 79.6092 1319.5997 1007.1275
C57BL/6J m 1282.0909 79.6092 1438.327 1125.8548
C57BLKS/J f 1267.2 83.4949 1431.0618 1103.3382
C57BLKS/J m 1427.5 83.4949 1591.3618 1263.6382
C57BR/cdJ f 932.2 83.4949 1096.0618 768.3382
C57BR/cdJ m 1018.0 76.22 1167.5847 868.4153
C57L/J f 676.6667 76.22 826.2513 527.082
C57L/J m 959.2667 68.1733 1093.0593 825.4741
C58/J f 852.8182 79.6092 1009.0543 696.5821
C58/J m 977.7778 88.0113 1150.5033 805.0523
CAST/EiJ f 1073.25 76.22 1222.8347 923.6653
CAST/EiJ m 1540.9091 79.6092 1697.1452 1384.673
CBA/J f 910.4444 88.0113 1083.1699 737.7189
CBA/J m 998.6 83.4949 1162.4618 834.7382
CE/J f 951.5385 73.2298 1095.2548 807.8222
CE/J m 1052.5 93.3501 1235.7031 869.2969
CZECHII/EiJ f 1014.4545 79.6092 1170.6906 858.2185
CZECHII/EiJ m 1201.4545 79.6092 1357.6906 1045.2185
DBA/1J f 870.5714 70.566 1009.0599 732.0829
DBA/1J m 670.0909 79.6092 826.327 513.8548
DBA/2J f 933.4615 73.2298 1077.1778 789.7452
DBA/2J m 950.2 83.4949 1114.0618 786.3382
FVB/NJ f 1102.3333 76.22 1251.918 952.7487
FVB/NJ m 1303.3333 76.22 1452.918 1153.7487
I/LnJ f 930.6154 73.2298 1074.3317 786.8991
I/LnJ m 1681.4286 70.566 1819.9171 1542.9401
JF1/MsJ f 1232.9167 76.22 1382.5013 1083.332
JF1/MsJ m 1624.0625 66.0085 1753.6066 1494.5184
KK/HlJ f 311.7857 70.566 450.2742 173.2972
KK/HlJ m 704.4545 79.6092 860.6906 548.2185
LP/J f 1044.4667 68.1733 1178.2593 910.6741
LP/J m 1100.6 83.4949 1264.4618 936.7382
MA/MyJ f 1077.9167 76.22 1227.5013 928.332
MA/MyJ m 1180.4615 73.2298 1324.1778 1036.7452
MOLF/EiJ f 1146.6154 73.2298 1290.3317 1002.8991
MOLF/EiJ m 1132.5333 68.1733 1266.3259 998.7407
MSM/MsJ f 1097.1818 79.6092 1253.4179 940.9457
MSM/MsJ m 1540.9091 79.6092 1697.1452 1384.673
NOD/ShiLtJ f 1092.0 83.4949 1255.8618 928.1382
NOD/ShiLtJ m 1457.0 83.4949 1620.8618 1293.1382
NON/ShiLtJ f 1035.1 83.4949 1198.9618 871.2382
NON/ShiLtJ m 1056.9 83.4949 1220.7618 893.0382
NZB/BlNJ f 1324.1667 76.22 1473.7513 1174.582
NZB/BlNJ m 1359.0 88.0113 1531.7255 1186.2745
NZW/LacJ f 1275.0 76.22 1424.5847 1125.4153
NZW/LacJ m 1599.0 83.4949 1762.8618 1435.1382
PERA/EiJ f 1709.1818 79.6092 1865.4179 1552.9457
PERA/EiJ m 1701.25 93.3501 1884.4531 1518.0469
PL/J f 1904.375 66.0085 2033.9191 1774.8309
PL/J m 1678.0 83.4949 1841.8618 1514.1382
PWK/PhJ f 726.5385 73.2298 870.2548 582.8222
PWK/PhJ m 891.9167 76.22 1041.5013 742.332
RF/J f 1215.7 83.4949 1379.5618 1051.8382
RF/J m 1055.6875 66.0085 1185.2316 926.1434
RIIIS/J f 1117.9091 79.6092 1274.1452 961.673
RIIIS/J m 1166.0 66.0085 1295.5441 1036.4559
SEA/GnJ f 1253.0 83.4949 1416.8618 1089.1382
SEA/GnJ m 1076.625 93.3501 1259.8281 893.4219
SJL/J f 524.125 93.3501 707.3281 340.9219
SJL/J m 1025.0714 70.566 1163.5599 886.5829
SM/J f 788.2727 79.6092 944.5088 632.0366
SM/J m 801.52 83.4949 965.3818 637.6582
SPRET/EiJ f 1021.6364 79.6092 1177.8725 865.4003
SPRET/EiJ m 1055.3636 79.6092 1211.5997 899.1275
SWR/J f 780.5385 73.2298 924.2548 636.8222
SWR/J m 1087.6364 79.6092 1243.8725 931.4003
WSB/EiJ f 1554.5455 79.6092 1710.7815 1398.3094
WSB/EiJ m 1615.5556 88.0113 1788.2811 1442.8301


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 838.5452 49.059 934.8255 742.265
A/J both 921.9 59.0398 1037.7678 806.0322
AKR/J both 849.9722 60.6576 969.0151 730.9294
BALB/cByJ both 1088.2724 41.9867 1170.6728 1005.872
BALB/cJ both 1257.2091 71.2047 1396.9509 1117.4673
BTBR T+ Itpr3tf/J both 1531.5 59.0398 1647.3678 1415.6322
BUB/BnJ both 1156.1143 54.6602 1263.387 1048.8416
C3H/HeJ both 1024.9 59.0398 1140.7678 909.0322
C57BL/10J both 905.8952 44.6299 993.4831 818.3074
C57BL/6J both 1222.7273 56.2922 1333.2029 1112.2517
C57BLKS/J both 1347.35 59.0398 1463.2178 1231.4822
C57BR/cdJ both 975.1 56.5263 1086.035 864.165
C57L/J both 817.9667 51.13 918.3111 717.6222
C58/J both 915.298 59.3372 1031.7495 798.8465
CAST/EiJ both 1307.0795 55.107 1415.2291 1198.93
CBA/J both 954.5222 60.6576 1073.5651 835.4794
CE/J both 1002.0192 59.3229 1118.4427 885.5957
CZECHII/EiJ both 1107.9545 56.2922 1218.4301 997.4789
DBA/1J both 770.3312 53.1912 874.7208 665.9415
DBA/2J both 941.8308 55.5293 1050.8091 832.8525
FVB/NJ both 1202.8333 53.8957 1308.6057 1097.061
I/LnJ both 1306.022 50.8482 1405.8136 1206.2304
JF1/MsJ both 1428.4896 50.4148 1527.4305 1329.5486
KK/HlJ both 508.1201 53.1912 612.5098 403.7305
LP/J both 1072.5333 53.8957 1178.3057 966.761
MA/MyJ both 1129.1891 52.8491 1232.9074 1025.4708
MOLF/EiJ both 1139.5744 50.0255 1237.7513 1041.3974
MSM/MsJ both 1319.0455 56.2922 1429.5211 1208.5699
NOD/ShiLtJ both 1274.5 59.0398 1390.3678 1158.6322
NON/ShiLtJ both 1046.0 59.0398 1161.8678 930.1322
NZB/BlNJ both 1341.5833 58.214 1455.8305 1227.3362
NZW/LacJ both 1437.0 56.5263 1547.935 1326.065
PERA/EiJ both 1705.2159 61.343 1825.6039 1584.8279
PL/J both 1791.1875 53.2177 1895.6293 1686.7457
PWK/PhJ both 809.2276 52.8491 912.9459 705.5093
RF/J both 1135.6938 53.2177 1240.1356 1031.2519
RIIIS/J both 1141.9545 51.7077 1243.4329 1040.4762
SEA/GnJ both 1164.8125 62.6211 1287.7088 1041.9162
SJL/J both 774.5982 58.5103 889.4268 659.7696
SM/J both 794.8964 57.6824 908.1002 681.6926
SPRET/EiJ both 1038.5 56.2922 1148.9756 928.0244
SWR/J both 934.0874 54.0838 1040.2289 827.9459
WSB/EiJ both 1585.0505 59.3372 1701.502 1468.599




  GWAS USING LINEAR MIXED MODELS