Project measure / variable:   Peters1   cHGB

ID, description, units MPD:6218   cHGB   calculated hemoglobin (HGB)   [g/dL]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters1 - calculated hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means14.0   g/dL 13.8   g/dL
Median of the strain means13.9   g/dL 13.8   g/dL
SD of the strain means± 0.729 ± 0.971
Coefficient of variation (CV)0.0521 0.0702
Min–max range of strain means12.2   –   15.7   g/dL 11.5   –   16.2   g/dL
Mean sample size per strain11.7   mice 11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.807 2.807 2.752 0.0975
strain 42 588.5115 14.0122 13.7377 < 0.0001
sex:strain 42 159.7262 3.803 3.7285 < 0.0001
Residuals 920 938.3806 1.02


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.0 0.683   14 0.183 0.0489 12.3, 14.9 0.02
129S1/SvImJ m 16.2 0.634   15 0.164 0.0391 14.6, 17.1 2.44
A/J f 13.8 0.691   10 0.219 0.0501 12.2, 14.6 -0.26
A/J m 13.8 0.983   10 0.311 0.0712 11.3, 14.8 -0.03
AKR/J f 14.3 1.18   10 0.374 0.0827 11.4, 15.3 0.43
AKR/J m 14.4 0.93   9 0.31 0.0647 12.7, 15.7 0.59
BALB/cByJ f 14.4 0.648   15 0.167 0.0449 12.6, 15.4 0.56
BALB/cByJ m 14.2 0.769   29 0.143 0.0541 11.4, 15.6 0.38
BALB/cJ f 15.0 0.344   11 0.104 0.0229 14.2, 15.5 1.39
BALB/cJ m 12.8 0.844   5 0.377 0.0658 11.4, 13.5 -1.06
BTBR T+ Itpr3tf/J f 13.2 0.671   10 0.212 0.0509 11.8, 14.4 -1.08
BTBR T+ Itpr3tf/J m 13.8 1.2   10 0.379 0.087 11.7, 15.4 -0.03
BUB/BnJ f 14.6 0.424   14 0.113 0.0291 14.0, 15.4 0.84
BUB/BnJ m 15.1 1.25   10 0.396 0.0827 12.7, 16.5 1.31
C3H/HeJ f 15.7 0.936   10 0.296 0.0598 13.6, 16.5 2.35
C3H/HeJ m 14.2 1.14   10 0.361 0.0802 11.4, 15.3 0.38
C57BL/10J f 13.8 0.646   21 0.141 0.0467 12.8, 15.2 -0.26
C57BL/10J m 14.4 1.04   15 0.269 0.0725 12.4, 16.2 0.59
C57BL/6J f 13.9 0.972   11 0.293 0.07 12.3, 15.2 -0.12
C57BL/6J m 14.8 1.12   11 0.337 0.0757 13.3, 17.1 1.0
C57BLKS/J f 14.7 0.809   10 0.256 0.055 13.1, 15.6 0.98
C57BLKS/J m 13.4 1.59   10 0.504 0.119 11.2, 15.2 -0.44
C57BR/cdJ f 15.2 0.91   10 0.288 0.06 13.5, 16.6 1.66
C57BR/cdJ m 15.7 1.02   12 0.295 0.0648 13.8, 17.2 1.93
C57L/J f 15.0 0.972   12 0.281 0.0646 13.0, 16.9 1.39
C57L/J m 16.2 1.16   15 0.301 0.0718 14.4, 18.3 2.44
C58/J f 13.3 1.29   11 0.39 0.0972 10.2, 14.6 -0.94
C58/J m 14.0 0.88   9 0.293 0.0627 13.4, 16.3 0.18
CAST/EiJ f 13.7 0.66   12 0.19 0.0483 12.3, 14.4 -0.4
CAST/EiJ m 12.6 1.29   11 0.388 0.102 10.9, 14.9 -1.27
CBA/J f 14.0 0.245   9 0.0816 0.0175 13.6, 14.4 0.02
CBA/J m 14.1 0.425   10 0.134 0.0302 13.6, 14.9 0.28
CE/J f 13.6 1.32   13 0.367 0.0972 11.3, 15.2 -0.53
CE/J m 14.6 1.23   8 0.434 0.0841 12.9, 16.3 0.8
CZECHII/EiJ f 14.4 1.26   11 0.379 0.0875 11.3, 15.5 0.56
CZECHII/EiJ m 14.2 0.957   11 0.288 0.0673 12.5, 15.4 0.38
DBA/1J f 14.9 0.748   14 0.2 0.0502 13.8, 15.8 1.25
DBA/1J m 13.7 0.477   11 0.144 0.0348 13.0, 14.3 -0.13
DBA/2J f 13.5 1.12   13 0.309 0.0827 10.7, 14.9 -0.67
DBA/2J m 13.3 1.37   10 0.433 0.103 11.9, 16.7 -0.54
FVB/NJ f 13.8 0.805   12 0.232 0.0583 12.4, 15.4 -0.26
FVB/NJ m 13.0 1.5   12 0.432 0.115 8.5, 14.2 -0.85
I/LnJ f 14.2 1.09   13 0.304 0.0769 12.5, 16.0 0.29
I/LnJ m 13.5 0.963   13 0.267 0.0711 11.4, 14.6 -0.34
JF1/MsJ f 12.6 0.952   11 0.287 0.0758 10.8, 13.5 -1.91
JF1/MsJ m 12.6 1.08   16 0.269 0.0857 10.4, 13.8 -1.27
KK/HlJ f 13.6 0.491   14 0.131 0.0362 12.5, 14.2 -0.53
KK/HlJ m 13.3 1.33   11 0.4 0.0993 11.3, 15.5 -0.54
LP/J f 14.5 1.64   15 0.424 0.114 11.3, 16.1 0.7
LP/J m 14.4 1.29   10 0.407 0.0894 12.8, 16.2 0.59
MA/MyJ f 13.2 1.55   12 0.446 0.117 9.1, 14.9 -1.08
MA/MyJ m 13.5 0.948   13 0.263 0.07 11.6, 15.1 -0.34
MOLF/EiJ f 12.5 1.19   13 0.33 0.0951 9.9, 13.7 -2.04
MOLF/EiJ m 12.3 1.09   15 0.281 0.0881 10.1, 14.1 -1.57
MSM/MsJ f 12.2 0.817   11 0.246 0.0671 10.4, 12.9 -2.45
MSM/MsJ m 11.5 1.52   11 0.457 0.132 8.5, 13.9 -2.4
NOD/ShiLtJ f 15.2 0.553   10 0.175 0.0365 14.2, 15.9 1.66
NOD/ShiLtJ m 14.4 0.941   10 0.297 0.0651 12.5, 15.6 0.59
NON/ShiLtJ f 13.9 0.554   10 0.175 0.0397 12.7, 14.7 -0.12
NON/ShiLtJ m 13.3 0.991   10 0.313 0.0744 11.6, 15.1 -0.54
NZB/BlNJ f 13.5 0.616   11 0.186 0.0456 12.5, 14.9 -0.67
NZB/BlNJ m 13.5 0.826   9 0.275 0.0613 12.1, 15.0 -0.34
NZW/LacJ f 14.6 0.592   12 0.171 0.0405 13.6, 15.5 0.84
NZW/LacJ m 12.9 0.731   10 0.231 0.0564 11.3, 14.0 -0.96
PERA/EiJ f 14.3 0.869   11 0.262 0.0607 12.8, 16.0 0.43
PERA/EiJ m 14.3 1.37   8 0.483 0.0957 12.4, 15.7 0.49
PL/J f 13.9 0.872   16 0.218 0.0627 12.5, 15.0 -0.12
PL/J m 14.5 1.49   10 0.473 0.103 12.5, 17.5 0.69
PWK/PhJ f 14.5 0.694   13 0.192 0.048 13.5, 15.4 0.7
PWK/PhJ m 13.9 0.513   12 0.148 0.0369 13.0, 14.7 0.07
RF/J f 14.4 1.41   10 0.447 0.0982 12.5, 17.5 0.56
RF/J m 14.8 1.44   16 0.359 0.0968 11.4, 16.1 1.0
RIIIS/J f 13.9 1.12   10 0.353 0.0806 11.9, 15.9 -0.12
RIIIS/J m 13.6 1.19   16 0.296 0.0875 10.7, 15.4 -0.23
SEA/GnJ f 13.4 1.14   10 0.361 0.0849 11.3, 14.9 -0.81
SEA/GnJ m 12.5 1.88   9 0.628 0.151 9.0, 14.8 -1.37
SJL/J f 13.5 0.811   8 0.287 0.0599 12.5, 15.1 -0.67
SJL/J m 12.9 1.15   14 0.308 0.0893 10.3, 14.3 -0.96
SM/J f 13.7 0.739   11 0.223 0.0542 12.8, 14.7 -0.4
SM/J m 13.4 0.549   10 0.173 0.0409 12.4, 14.0 -0.44
SPRET/EiJ f 13.8 0.436   11 0.131 0.0315 13.2, 14.5 -0.26
SPRET/EiJ m 14.1 0.565   11 0.17 0.04 13.1, 14.8 0.28
SWR/J f 13.8 1.01   13 0.28 0.0733 11.7, 15.0 -0.26
SWR/J m 13.1 1.23   11 0.371 0.0937 11.8, 14.7 -0.75
WSB/EiJ f 13.5 0.452   11 0.136 0.0336 12.8, 14.2 -0.67
WSB/EiJ m 13.8 0.66   9 0.22 0.0478 12.8, 14.7 -0.03


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 13.9786 0.2699 14.5083 13.4488
129S1/SvImJ m 16.2 0.2608 16.7118 15.6882
A/J f 13.8 0.3194 14.4268 13.1732
A/J m 13.8 0.3194 14.4268 13.1732
AKR/J f 14.29 0.3194 14.9168 13.6632
AKR/J m 14.3667 0.3366 15.0274 13.706
BALB/cByJ f 14.44 0.2608 14.9518 13.9282
BALB/cByJ m 14.2138 0.1875 14.5819 13.8457
BALB/cJ f 15.0273 0.3045 15.6249 14.4297
BALB/cJ m 12.82 0.4517 13.7064 11.9336
BTBR T+ Itpr3tf/J f 13.18 0.3194 13.8068 12.5532
BTBR T+ Itpr3tf/J m 13.76 0.3194 14.3868 13.1332
BUB/BnJ f 14.5571 0.2699 15.0869 14.0274
BUB/BnJ m 15.14 0.3194 15.7668 14.5132
C3H/HeJ f 15.66 0.3194 16.2868 15.0332
C3H/HeJ m 14.24 0.3194 14.8668 13.6132
C57BL/10J f 13.8381 0.2204 14.2706 13.4056
C57BL/10J m 14.3867 0.2608 14.8984 13.8749
C57BL/6J f 13.8727 0.3045 14.4703 13.2751
C57BL/6J m 14.7727 0.3045 15.3703 14.1751
C57BLKS/J f 14.71 0.3194 15.3368 14.0832
C57BLKS/J m 13.45 0.3194 14.0768 12.8232
C57BR/cdJ f 15.17 0.3194 15.7968 14.5432
C57BR/cdJ m 15.7417 0.2915 16.3138 15.1695
C57L/J f 15.05 0.2915 15.6222 14.4778
C57L/J m 16.2067 0.2608 16.7184 15.6949
C58/J f 13.3091 0.3045 13.9067 12.7115
C58/J m 14.0444 0.3366 14.7051 13.3838
CAST/EiJ f 13.6583 0.2915 14.2305 13.0862
CAST/EiJ m 12.5909 0.3045 13.1885 11.9933
CBA/J f 14.0333 0.3366 14.694 13.3726
CBA/J m 14.05 0.3194 14.6768 13.4232
CE/J f 13.6308 0.2801 14.1805 13.081
CE/J m 14.6125 0.3571 15.3133 13.9117
CZECHII/EiJ f 14.3636 0.3045 14.9612 13.766
CZECHII/EiJ m 14.2091 0.3045 14.8067 13.6115
DBA/1J f 14.8929 0.2699 15.4226 14.3631
DBA/1J m 13.7182 0.3045 14.3158 13.1206
DBA/2J f 13.4769 0.2801 14.0266 12.9272
DBA/2J m 13.3 0.3194 13.9268 12.6732
FVB/NJ f 13.8 0.2915 14.3722 13.2278
FVB/NJ m 12.9833 0.2915 13.5555 12.4112
I/LnJ f 14.2308 0.2801 14.7805 13.681
I/LnJ m 13.5385 0.2801 14.0882 12.9887
JF1/MsJ f 12.5636 0.3045 13.1612 11.966
JF1/MsJ m 12.575 0.2525 13.0705 12.0795
KK/HlJ f 13.5857 0.2699 14.1154 13.056
KK/HlJ m 13.3455 0.3045 13.9431 12.7478
LP/J f 14.4533 0.2608 14.9651 13.9416
LP/J m 14.41 0.3194 15.0368 13.7832
MA/MyJ f 13.1917 0.2915 13.7638 12.6195
MA/MyJ m 13.5385 0.2801 14.0882 12.9887
MOLF/EiJ f 12.5 0.2801 13.0497 11.9503
MOLF/EiJ m 12.3333 0.2608 12.8451 11.8216
MSM/MsJ f 12.1818 0.3045 12.7794 11.5842
MSM/MsJ m 11.4909 0.3045 12.0885 10.8933
NOD/ShiLtJ f 15.18 0.3194 15.8068 14.5532
NOD/ShiLtJ m 14.45 0.3194 15.0768 13.8232
NON/ShiLtJ f 13.95 0.3194 14.5768 13.3232
NON/ShiLtJ m 13.33 0.3194 13.9568 12.7032
NZB/BlNJ f 13.5182 0.3045 14.1158 12.9206
NZB/BlNJ m 13.4667 0.3366 14.1274 12.806
NZW/LacJ f 14.6083 0.2915 15.1805 14.0362
NZW/LacJ m 12.95 0.3194 13.5768 12.3232
PERA/EiJ f 14.3182 0.3045 14.9158 13.7206
PERA/EiJ m 14.2875 0.3571 14.9883 13.5867
PL/J f 13.9 0.2525 14.3955 13.4045
PL/J m 14.54 0.3194 15.1668 13.9132
PWK/PhJ f 14.4538 0.2801 15.0036 13.9041
PWK/PhJ m 13.9 0.2915 14.4722 13.3278
RF/J f 14.39 0.3194 15.0168 13.7632
RF/J m 14.8312 0.2525 15.3268 14.3357
RIIIS/J f 13.87 0.3194 14.4968 13.2432
RIIIS/J m 13.55 0.2525 14.0455 13.0545
SEA/GnJ f 13.43 0.3194 14.0568 12.8032
SEA/GnJ m 12.5111 0.3366 13.1718 11.8504
SJL/J f 13.5375 0.3571 14.2383 12.8367
SJL/J m 12.9 0.2699 13.4297 12.3703
SM/J f 13.6545 0.3045 14.2522 13.0569
SM/J m 13.41 0.3194 14.0368 12.7832
SPRET/EiJ f 13.8273 0.3045 14.4249 13.2297
SPRET/EiJ m 14.1182 0.3045 14.7158 13.5206
SWR/J f 13.7769 0.2801 14.3266 13.2272
SWR/J m 13.1182 0.3045 13.7158 12.5206
WSB/EiJ f 13.4545 0.3045 14.0522 12.8569
WSB/EiJ m 13.8 0.3366 14.4607 13.1393


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.0893 0.1877 15.4576 14.721
A/J both 13.8 0.2258 14.2432 13.3568
AKR/J both 14.3283 0.232 14.7837 13.873
BALB/cByJ both 14.3269 0.1606 14.6421 14.0117
BALB/cJ both 13.9236 0.2724 14.4582 13.3891
BTBR T+ Itpr3tf/J both 13.47 0.2258 13.9132 13.0268
BUB/BnJ both 14.8486 0.2091 15.2589 14.4382
C3H/HeJ both 14.95 0.2258 15.3932 14.5068
C57BL/10J both 14.1124 0.1707 14.4474 13.7774
C57BL/6J both 14.3227 0.2153 14.7453 13.9002
C57BLKS/J both 14.08 0.2258 14.5232 13.6368
C57BR/cdJ both 15.4558 0.2162 15.8802 15.0315
C57L/J both 15.6283 0.1956 16.0122 15.2445
C58/J both 13.6768 0.227 14.1222 13.2313
CAST/EiJ both 13.1246 0.2108 13.5383 12.7109
CBA/J both 14.0417 0.232 14.497 13.5863
CE/J both 14.1216 0.2269 14.567 13.6763
CZECHII/EiJ both 14.2864 0.2153 14.7089 13.8638
DBA/1J both 14.3055 0.2035 14.7048 13.9062
DBA/2J both 13.3885 0.2124 13.8053 12.9716
FVB/NJ both 13.3917 0.2062 13.7963 12.9871
I/LnJ both 13.8846 0.1981 14.2733 13.4959
JF1/MsJ both 12.5693 0.1978 12.9575 12.1812
KK/HlJ both 13.4656 0.2035 13.8649 13.0663
LP/J both 14.4317 0.2062 14.8363 14.0271
MA/MyJ both 13.3651 0.2021 13.7618 12.9683
MOLF/EiJ both 12.4167 0.1913 12.7922 12.0411
MSM/MsJ both 11.8364 0.2153 12.2589 11.4138
NOD/ShiLtJ both 14.815 0.2258 15.2582 14.3718
NON/ShiLtJ both 13.64 0.2258 14.0832 13.1968
NZB/BlNJ both 13.4924 0.227 13.9379 13.047
NZW/LacJ both 13.7792 0.2162 14.2035 13.3548
PERA/EiJ both 14.3028 0.2346 14.7633 13.8424
PL/J both 14.22 0.2036 14.6195 13.8205
PWK/PhJ both 14.1769 0.2021 14.5737 13.7802
RF/J both 14.6106 0.2036 15.0101 14.2111
RIIIS/J both 13.71 0.2036 14.1095 13.3105
SEA/GnJ both 12.9706 0.232 13.4259 12.5152
SJL/J both 13.2187 0.2238 13.658 12.7795
SM/J both 13.5323 0.2206 13.9653 13.0993
SPRET/EiJ both 13.9727 0.2153 14.3953 13.5502
SWR/J both 13.4476 0.2069 13.8535 13.0416
WSB/EiJ both 13.6273 0.227 14.0727 13.1818




  GWAS USING LINEAR MIXED MODELS