Project measure / variable:   Peters1   NEUT

ID, description, units MPD:6211   NEUT   neutrophil differential (percent of total WBC)   [%]  
Data set, strains Peters1   inbred w/CC7   43 strains     sex: both     age: 10wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters1 - neutrophil differential (percent of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested43 strains43 strains
Mean of the strain means13.2   % 16.6   %
Median of the strain means13.0   % 15.3   %
SD of the strain means± 4.20 ± 5.84
Coefficient of variation (CV)0.318 0.351
Min–max range of strain means5.21   –   21.6   % 4.99   –   27.0   %
Mean sample size per strain11.7   mice 11.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2077.5323 2077.5323 95.3417 < 0.0001
strain 42 20232.9666 481.7373 22.1078 < 0.0001
sex:strain 42 4929.6457 117.3725 5.3864 < 0.0001
Residuals 915 19938.2121 21.7904


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 14.2 4.26   14 1.14 0.301 8.1, 23.3 0.24
129S1/SvImJ m 11.9 2.55   15 0.658 0.214 8.3, 19.1 -0.81
A/J f 18.7 3.06   10 0.969 0.163 14.7, 25.7 1.31
A/J m 14.0 1.72   10 0.543 0.123 10.7, 16.3 -0.45
AKR/J f 19.0 3.07   10 0.97 0.161 14.4, 23.3 1.38
AKR/J m 18.6 3.38   9 1.13 0.182 12.6, 23.8 0.34
BALB/cByJ f 14.0 3.66   15 0.945 0.262 7.0, 18.3 0.19
BALB/cByJ m 15.9 5.93   29 1.1 0.373 11.3, 43.6 -0.12
BALB/cJ f 16.5 3.68   11 1.11 0.222 11.2, 23.1 0.78
BALB/cJ m 18.9 3.01   5 1.35 0.159 15.4, 22.4 0.39
BTBR T+ Itpr3tf/J f 10.7 2.3   10 0.729 0.216 6.7, 14.4 -0.6
BTBR T+ Itpr3tf/J m 14.9 4.71   10 1.49 0.317 10.2, 23.9 -0.29
BUB/BnJ f 11.6 5.68   14 1.52 0.49 6.1, 26.4 -0.38
BUB/BnJ m 14.6 6.23   10 1.97 0.427 7.0, 28.0 -0.35
C3H/HeJ f 15.9 2.49   10 0.787 0.156 11.5, 18.8 0.64
C3H/HeJ m 23.5 3.63   10 1.15 0.155 18.2, 28.9 1.18
C57BL/10J f 7.98 4.49   21 0.98 0.563 4.6, 21.8 -1.24
C57BL/10J m 6.53 1.47   15 0.379 0.225 4.2, 9.2 -1.73
C57BL/6J f 5.95 0.829   10 0.262 0.139 4.9, 7.1 -1.73
C57BL/6J m 11.9 5.75   9 1.92 0.485 7.0, 24.7 -0.81
C57BLKS/J f 7.58 1.99   10 0.631 0.263 5.5, 11.3 -1.34
C57BLKS/J m 8.8 2.87   10 0.907 0.326 4.8, 12.4 -1.34
C57BR/cdJ f 5.21 1.97   10 0.624 0.379 3.1, 9.5 -1.9
C57BR/cdJ m 9.61 8.22   12 2.37 0.856 4.2, 26.6 -1.2
C57L/J f 6.13 1.36   11 0.411 0.222 3.1, 8.4 -1.69
C57L/J m 4.99 1.15   15 0.298 0.231 3.8, 8.5 -1.99
C58/J f 13.1 1.9   11 0.572 0.145 11.3, 16.4 -0.03
C58/J m 17.4 6.37   9 2.12 0.367 10.3, 28.3 0.13
CAST/EiJ f 8.18 2.77   12 0.801 0.339 5.8, 15.0 -1.2
CAST/EiJ m 11.3 3.42   11 1.03 0.303 7.1, 17.2 -0.91
CBA/J f 12.5 1.93   9 0.642 0.154 9.3, 16.1 -0.17
CBA/J m 15.1 2.29   10 0.723 0.151 11.0, 18.2 -0.26
CE/J f 16.2 5.36   13 1.49 0.331 7.1, 24.5 0.71
CE/J m 19.0 1.89   8 0.666 0.0991 16.7, 23.2 0.41
CZECHII/EiJ f 17.1 3.74   11 1.13 0.218 10.5, 22.0 0.93
CZECHII/EiJ m 26.2 10.4   11 3.13 0.396 13.2, 45.8 1.64
DBA/1J f 18.9 2.96   14 0.792 0.156 14.6, 27.0 1.36
DBA/1J m 17.1 3.11   11 0.939 0.182 13.4, 25.1 0.08
DBA/2J f 16.9 1.63   13 0.451 0.0963 14.5, 19.7 0.88
DBA/2J m 14.9 4.9   10 1.55 0.328 9.2, 26.5 -0.29
FVB/NJ f 9.09 1.6   12 0.461 0.176 6.0, 11.8 -0.98
FVB/NJ m 13.6 7.73   12 2.23 0.569 6.3, 35.6 -0.52
I/LnJ f 11.2 2.47   13 0.685 0.222 7.7, 15.7 -0.48
I/LnJ m 24.6 11.5   14 3.06 0.467 9.0, 46.5 1.37
JF1/MsJ f 9.87 2.91   12 0.84 0.295 6.1, 17.8 -0.79
JF1/MsJ m 14.5 4.24   16 1.06 0.293 8.0, 21.6 -0.36
KK/HlJ f 21.6 4.45   14 1.19 0.206 9.7, 27.5 2.0
KK/HlJ m 26.6 10.7   11 3.22 0.401 3.8, 38.7 1.71
LP/J f 13.0 1.92   15 0.496 0.148 9.6, 16.6 -0.05
LP/J m 18.5 5.85   10 1.85 0.317 9.3, 26.7 0.32
MA/MyJ f 11.5 2.2   12 0.634 0.191 8.2, 15.2 -0.41
MA/MyJ m 17.9 2.74   13 0.76 0.153 12.6, 23.1 0.22
MOLF/EiJ f 16.8 4.31   13 1.2 0.257 12.9, 28.5 0.86
MOLF/EiJ m 18.2 6.67   15 1.72 0.366 7.2, 33.4 0.27
MSM/MsJ f 10.7 2.43   11 0.732 0.226 7.3, 13.9 -0.6
MSM/MsJ m 27.0 13.5   11 4.08 0.501 9.9, 52.1 1.78
NOD/ShiLtJ f 16.8 4.0   10 1.27 0.238 10.8, 24.3 0.86
NOD/ShiLtJ m 21.0 3.55   10 1.12 0.169 14.9, 26.6 0.75
NON/ShiLtJ f 19.1 2.61   10 0.825 0.137 16.4, 23.8 1.4
NON/ShiLtJ m 26.2 8.32   9 2.77 0.317 14.1, 40.6 1.64
NZB/BlNJ f 18.1 4.34   11 1.31 0.24 9.1, 24.9 1.17
NZB/BlNJ m 27.0 6.79   9 2.26 0.251 20.9, 41.4 1.78
NZW/LacJ f 11.5 1.83   12 0.529 0.159 7.8, 14.7 -0.41
NZW/LacJ m 25.5 9.33   10 2.95 0.366 14.3, 41.1 1.52
PERA/EiJ f 13.1 3.12   11 0.941 0.238 9.1, 21.3 -0.03
PERA/EiJ m 18.8 2.16   8 0.763 0.115 14.4, 21.5 0.37
PL/J f 13.0 3.38   16 0.846 0.26 7.4, 18.2 -0.05
PL/J m 17.5 4.18   10 1.32 0.238 11.4, 26.1 0.15
PWK/PhJ f 17.4 2.49   13 0.69 0.143 13.5, 21.0 1.0
PWK/PhJ m 15.0 2.67   12 0.772 0.178 11.3, 20.0 -0.28
RF/J f 9.41 1.86   10 0.588 0.198 6.9, 13.6 -0.9
RF/J m 9.81 2.23   16 0.558 0.227 5.7, 13.7 -1.17
RIIIS/J f 10.2 3.95   10 1.25 0.387 3.8, 19.3 -0.72
RIIIS/J m 10.4 3.28   16 0.819 0.316 5.8, 18.6 -1.06
SEA/GnJ f 12.5 2.27   10 0.719 0.182 8.1, 15.5 -0.17
SEA/GnJ m 13.1 2.0   9 0.667 0.152 10.4, 16.2 -0.6
SJL/J f 9.3 2.57   8 0.91 0.277 5.7, 13.2 -0.93
SJL/J m 14.9 6.81   14 1.82 0.458 5.7, 27.8 -0.29
SM/J f 16.3 3.4   10 1.08 0.209 11.9, 23.3 0.74
SM/J m 15.3 3.14   10 0.993 0.205 9.5, 19.5 -0.23
SPRET/EiJ f 15.7 5.24   11 1.58 0.335 9.1, 27.1 0.59
SPRET/EiJ m 15.2 1.83   11 0.55 0.12 12.9, 19.6 -0.24
SWR/J f 7.5 1.82   13 0.504 0.242 4.7, 10.8 -1.36
SWR/J m 6.49 1.25   11 0.378 0.193 4.8, 9.0 -1.73
WSB/EiJ f 17.9 5.49   11 1.66 0.307 9.5, 27.9 1.12
WSB/EiJ m 22.2 4.76   8 1.68 0.215 16.3, 27.8 0.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 14.1714 1.2476 16.6199 11.723
129S1/SvImJ m 11.88 1.2053 14.2454 9.5146
A/J f 18.75 1.4762 21.647 15.853
A/J m 13.99 1.4762 16.887 11.093
AKR/J f 19.04 1.4762 21.937 16.143
AKR/J m 18.6222 1.556 21.676 15.5685
BALB/cByJ f 13.9867 1.2053 16.3521 11.6212
BALB/cByJ m 15.8931 0.8668 17.5943 14.1919
BALB/cJ f 16.5364 1.4075 19.2986 13.7741
BALB/cJ m 18.9 2.0876 22.997 14.803
BTBR T+ Itpr3tf/J f 10.66 1.4762 13.557 7.763
BTBR T+ Itpr3tf/J m 14.87 1.4762 17.767 11.973
BUB/BnJ f 11.5786 1.2476 14.027 9.1301
BUB/BnJ m 14.58 1.4762 17.477 11.683
C3H/HeJ f 15.94 1.4762 18.837 13.043
C3H/HeJ m 23.47 1.4762 26.367 20.573
C57BL/10J f 7.981 1.0186 9.9801 5.9818
C57BL/10J m 6.5267 1.2053 8.8921 4.1612
C57BL/6J f 5.95 1.4762 8.847 3.053
C57BL/6J m 11.8667 1.556 14.9204 8.8129
C57BLKS/J f 7.58 1.4762 10.477 4.683
C57BLKS/J m 8.8 1.4762 11.697 5.903
C57BR/cdJ f 5.21 1.4762 8.107 2.313
C57BR/cdJ m 9.6083 1.3475 12.253 6.9637
C57L/J f 6.1273 1.4075 8.8895 3.365
C57L/J m 4.9867 1.2053 7.3521 2.6212
C58/J f 13.0636 1.4075 15.8259 10.3014
C58/J m 17.3556 1.556 20.4093 14.3018
CAST/EiJ f 8.1833 1.3475 10.828 5.5387
CAST/EiJ m 11.3 1.4075 14.0622 8.5378
CBA/J f 12.4778 1.556 15.5315 9.424
CBA/J m 15.13 1.4762 18.027 12.233
CE/J f 16.1846 1.2947 18.7255 13.6437
CE/J m 19.025 1.6504 22.264 15.786
CZECHII/EiJ f 17.1455 1.4075 19.9077 14.3832
CZECHII/EiJ m 26.2273 1.4075 28.9895 23.465
DBA/1J f 18.9429 1.2476 21.3913 16.4944
DBA/1J m 17.1455 1.4075 19.9077 14.3832
DBA/2J f 16.8692 1.2947 19.4101 14.3284
DBA/2J m 14.94 1.4762 17.837 12.043
FVB/NJ f 9.0917 1.3475 11.7363 6.447
FVB/NJ m 13.5833 1.3475 16.228 10.9387
I/LnJ f 11.1538 1.2947 13.6947 8.613
I/LnJ m 24.55 1.2476 26.9985 22.1015
JF1/MsJ f 9.8667 1.3475 12.5113 7.222
JF1/MsJ m 14.5063 1.167 16.7966 12.2159
KK/HlJ f 21.6214 1.2476 24.0699 19.173
KK/HlJ m 26.6182 1.4075 29.3804 23.856
LP/J f 13.0067 1.2053 15.3721 10.6412
LP/J m 18.49 1.4762 21.387 15.593
MA/MyJ f 11.5 1.3475 14.1446 8.8554
MA/MyJ m 17.9308 1.2947 20.4716 15.3899
MOLF/EiJ f 16.7769 1.2947 19.3178 14.236
MOLF/EiJ m 18.2133 1.2053 20.5788 15.8479
MSM/MsJ f 10.7364 1.4075 13.4986 7.9741
MSM/MsJ m 26.9818 1.4075 29.744 24.2196
NOD/ShiLtJ f 16.84 1.4762 19.737 13.943
NOD/ShiLtJ m 20.98 1.4762 23.877 18.083
NON/ShiLtJ f 19.12 1.4762 22.017 16.223
NON/ShiLtJ m 26.2222 1.556 29.276 23.1685
NZB/BlNJ f 18.0727 1.4075 20.835 15.3105
NZB/BlNJ m 27.0222 1.556 30.076 23.9685
NZW/LacJ f 11.5083 1.3475 14.153 8.8637
NZW/LacJ m 25.52 1.4762 28.417 22.623
PERA/EiJ f 13.1182 1.4075 15.8804 10.356
PERA/EiJ m 18.75 1.6504 21.989 15.511
PL/J f 12.9938 1.167 15.2841 10.7034
PL/J m 17.52 1.4762 20.417 14.623
PWK/PhJ f 17.3538 1.2947 19.8947 14.813
PWK/PhJ m 14.9833 1.3475 17.628 12.3387
RF/J f 9.41 1.4762 12.307 6.513
RF/J m 9.8063 1.167 12.0966 7.5159
RIIIS/J f 10.2 1.4762 13.097 7.303
RIIIS/J m 10.3688 1.167 12.6591 8.0784
SEA/GnJ f 12.46 1.4762 15.357 9.563
SEA/GnJ m 13.1444 1.556 16.1982 10.0907
SJL/J f 9.3 1.6504 12.539 6.061
SJL/J m 14.8643 1.2476 17.3127 12.4158
SM/J f 16.28 1.4762 19.177 13.383
SM/J m 15.31 1.4762 18.207 12.413
SPRET/EiJ f 15.6636 1.4075 18.4259 12.9014
SPRET/EiJ m 15.2182 1.4075 17.9804 12.456
SWR/J f 7.5 1.2947 10.0409 4.9591
SWR/J m 6.4909 1.4075 9.2531 3.7287
WSB/EiJ f 17.8727 1.4075 20.635 15.1105
WSB/EiJ m 22.1875 1.6504 25.4265 18.9485


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 13.0257 0.8673 14.7279 11.3235
A/J both 16.37 1.0438 18.4185 14.3215
AKR/J both 18.8311 1.0724 20.9358 16.7265
BALB/cByJ both 14.9399 0.7423 16.3967 13.4831
BALB/cJ both 17.7182 1.2589 20.1888 15.2476
BTBR T+ Itpr3tf/J both 12.765 1.0438 14.8135 10.7165
BUB/BnJ both 13.0793 0.9664 14.9758 11.1827
C3H/HeJ both 19.705 1.0438 21.7535 17.6565
C57BL/10J both 7.2538 0.789 8.8023 5.7053
C57BL/6J both 8.9083 1.0724 11.013 6.8037
C57BLKS/J both 8.19 1.0438 10.2385 6.1415
C57BR/cdJ both 7.4092 0.9994 9.3705 5.4479
C57L/J both 5.557 0.9265 7.3753 3.7387
C58/J both 15.2096 1.0491 17.2684 13.1508
CAST/EiJ both 9.7417 0.9743 11.6537 7.8296
CBA/J both 13.8039 1.0724 15.9085 11.6992
CE/J both 17.6048 1.0488 19.6632 15.5465
CZECHII/EiJ both 21.6864 0.9952 23.6396 19.7332
DBA/1J both 18.0442 0.9404 19.8897 16.1986
DBA/2J both 15.9046 0.9817 17.8313 13.9779
FVB/NJ both 11.3375 0.9529 13.2075 9.4675
I/LnJ both 17.8519 0.899 19.6162 16.0876
JF1/MsJ both 12.1865 0.8913 13.9357 10.4372
KK/HlJ both 24.1198 0.9404 25.9654 22.2742
LP/J both 15.7483 0.9529 17.6184 13.8783
MA/MyJ both 14.7154 0.9344 16.5491 12.8817
MOLF/EiJ both 17.4951 0.8844 19.2309 15.7594
MSM/MsJ both 18.8591 0.9952 20.8123 16.9059
NOD/ShiLtJ both 18.91 1.0438 20.9585 16.8615
NON/ShiLtJ both 22.6711 1.0724 24.7758 20.5665
NZB/BlNJ both 22.5475 1.0491 24.6063 20.4886
NZW/LacJ both 18.5142 0.9994 20.4755 16.5529
PERA/EiJ both 15.9341 1.0845 18.0625 13.8057
PL/J both 15.2569 0.9409 17.1034 13.4104
PWK/PhJ both 16.1686 0.9344 18.0023 14.3349
RF/J both 9.6081 0.9409 11.4546 7.7616
RIIIS/J both 10.2844 0.9409 12.1309 8.4379
SEA/GnJ both 12.8022 1.0724 14.9069 10.6976
SJL/J both 12.0821 1.0344 14.1123 10.052
SM/J both 15.795 1.0438 17.8435 13.7465
SPRET/EiJ both 15.4409 0.9952 17.3941 13.4877
SWR/J both 6.9955 0.9562 8.872 5.1189
WSB/EiJ both 20.0301 1.0845 22.1586 17.9017




  GWAS USING LINEAR MIXED MODELS