Project measure / variable:   Crusio1   lacun_L

ID, description, units MPD:62080   lacun_L   size of stratum lacunosum-moleculare (arbitrary units)    left  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
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  STRAIN COMPARISON PLOT
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Crusio1 - size of stratum lacunosum-moleculare (arbitrary units) left



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means87512.0   None 94195.0   None
Median of the strain means83298.0   None 86805.0   None
SD of the strain means± 22009.0 ± 37920.0
Coefficient of variation (CV)0.2515 0.4026
Min–max range of strain means61996.0   –   194007.0   None 62339.0   –   334929.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2176011934.8596 2176011934.8596 2.4615 0.1176
strain 47 107537622288.261 2288034516.7715 2.5882 < 0.0001
sex:strain 47 53817840865.758 1145060443.9523 1.2953 0.1023
Residuals 343 303223256723.724 884032818.4365


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 119676.0 0.0   1   0.0 0.0 119675.6, 119675.6 1.46
BXD1 m 121380.0 0.0   1   0.0 0.0 121379.6, 121379.6 0.72
BXD100 f 98986.0 15141.0   5 6771.0 0.153 78562.4, 119606.6 0.52
BXD100 m 87527.0 18146.0   5 8115.0 0.2073 64193.2, 114737.0 -0.18
BXD101 f 107342.0 20169.0   3 11645.0 0.1879 89282.8, 129107.4 0.9
BXD101 m 92363.0 14916.0   4 7458.0 0.1615 73506.8, 107280.4 -0.05
BXD102 f 93376.0 18175.0   5 8128.0 0.1946 74756.2, 117208.8 0.27
BXD102 m 80568.0 20656.0   5 9238.0 0.2564 64448.2, 116336.2 -0.36
BXD11 f 78058.0 23950.0   5 10711.0 0.3068 49725.4, 112705.0 -0.43
BXD11 m 70539.0 10989.0   5 4914.0 0.1558 56461.4, 85372.8 -0.62
BXD13 f 87432.0 9512.0   5 4254.0 0.1088 73804.2, 96762.2 0.0
BXD13 m 85935.0 7749.0   5 3466.0 0.0902 78031.0, 97336.4 -0.22
BXD14 f 90980.0 15372.0   5 6875.0 0.169 71225.6, 110934.6 0.16
BXD14 m 123640.0 79150.0   5 35397.0 0.6402 72270.6, 264226.6 0.78
BXD15 f 86075.0 5845.0   5 2614.0 0.0679 78013.4, 92196.8 -0.07
BXD15 m 106528.0 9526.0   5 4260.0 0.0894 99926.4, 123307.8 0.33
BXD16 f 98031.0 14687.0   5 6568.0 0.1498 74625.4, 110844.8 0.48
BXD16 m 92354.0 12202.0   5 5457.0 0.1321 72695.2, 101785.8 -0.05
BXD18 f 106359.0 0.0   1   0.0 0.0 106359.4, 106359.4 0.86
BXD18 m 87854.0 0.0   1   0.0 0.0 87854.0, 87854.0 -0.17
BXD19 f 138929.0 0.0   1   0.0 0.0 138929.0, 138929.0 2.34
BXD19 m 88219.0 0.0   1   0.0 0.0 88218.6, 88218.6 -0.16
BXD2 f 74195.0 5485.0   5 2453.0 0.0739 67277.2, 80212.4 -0.61
BXD2 m 87471.0 10152.0   5 4540.0 0.1161 72197.0, 98463.0 -0.18
BXD21 f 98451.0 32418.0   5 14498.0 0.3293 76349.6, 151235.4 0.5
BXD21 m 75477.0 19310.0   6 7883.0 0.2558 59340.6, 101785.8 -0.49
BXD27 f 109158.0 55431.0   5 24789.0 0.5078 64953.4, 204149.8 0.98
BXD27 m 86805.0 12330.0   5 5514.0 0.142 73284.2, 101990.4 -0.19
BXD28 f 67351.0 16209.0   5 7249.0 0.2407 53221.0, 92828.0 -0.92
BXD28 m 81395.0 19950.0   5 8922.0 0.2451 61371.4, 104716.0 -0.34
BXD31 f 94079.0 19231.0   5 8600.0 0.2044 67858.8, 120743.8 0.3
BXD31 m 103781.0 17208.0   4 8604.0 0.1658 79150.8, 118859.8 0.25
BXD32 f 65140.0 3398.0   5 1519.0 0.0522 60593.0, 68170.0 -1.02
BXD32 m 83353.0 4837.0   5 2163.0 0.058 75763.2, 88359.8 -0.29
BXD33 m 100927.0 0.0   1   0.0 0.0 100927.0, 100927.0 0.18
BXD34 f 112908.0 0.0   1   0.0 0.0 112908.2, 112908.2 1.15
BXD34 m 78710.0 0.0   1   0.0 0.0 78709.6, 78709.6 -0.41
BXD39 f 61996.0 13077.0   5 5848.0 0.2109 43630.8, 73738.6 -1.16
BXD39 m 70610.0 9027.0   5 4037.0 0.1278 61214.4, 84631.0 -0.62
BXD40 f 87407.0 16488.0   5 7374.0 0.1886 68294.0, 112748.6 0.0
BXD40 m 103178.0 10379.0   5 4642.0 0.1006 88745.8, 117541.0 0.24
BXD42 f 91078.0 10745.0   5 4805.0 0.118 74756.4, 102158.4 0.16
BXD42 m 94581.0 22200.0   5 9928.0 0.2347 76035.6, 130952.0 0.01
BXD43 f 90098.0 12782.0   5 5716.0 0.1419 80762.4, 111694.6 0.12
BXD43 m 74335.0 6462.0   5 2890.0 0.0869 65856.4, 82428.4 -0.52
BXD44 f 82034.0 10694.0   5 4783.0 0.1304 67502.6, 97549.0 -0.25
BXD44 m 86342.0 20396.0   5 9121.0 0.2362 55330.8, 109337.6 -0.21
BXD48 f 75312.0 17297.0   5 7735.0 0.2297 52931.6, 99972.4 -0.55
BXD48 m 76037.0 13781.0   5 6163.0 0.1812 58806.4, 89835.6 -0.48
BXD49 f 95559.0 9020.0   4 4510.0 0.0944 82794.6, 101962.6 0.37
BXD49 m 104665.0 23106.0   5 10334.0 0.2208 87817.2, 144740.8 0.28
BXD50 f 67045.0 11259.0   5 5035.0 0.1679 55696.2, 80808.2 -0.93
BXD50 m 81311.0 11694.0   5 5230.0 0.1438 63869.4, 94896.8 -0.34
BXD51 f 76184.0 10051.0   5 4495.0 0.1319 62792.8, 90633.2 -0.51
BXD51 m 84770.0 10642.0   5 4759.0 0.1255 72353.8, 99358.8 -0.25
BXD6 f 88934.0 24598.0   5 11000.0 0.2766 59648.6, 124728.8 0.06
BXD6 m 117358.0 10869.0   4 5434.0 0.0926 104905.4, 131094.2 0.61
BXD61 f 68352.0 5699.0   5 2549.0 0.0834 58612.0, 73431.6 -0.87
BXD61 m 73958.0 10118.0   5 4525.0 0.1368 60694.8, 81488.2 -0.53
BXD62 f 67650.0 11242.0   5 5028.0 0.1662 52498.4, 82538.2 -0.9
BXD62 m 63586.0 10124.0   5 4528.0 0.1592 47955.6, 73799.6 -0.81
BXD65 f 74960.0 9050.0   3 5225.0 0.1207 68941.2, 85368.0 -0.57
BXD65 m 80388.0 12544.0   5 5610.0 0.156 64456.4, 98303.0 -0.36
BXD66 f 80807.0 5047.0   2   3569.0 0.0625 77238.2, 84376.0 -0.3
BXD66 m 92928.0 10809.0   2   7643.0 0.1163 85284.8, 100570.8 -0.03
BXD68 f 87590.0 6368.0   2   4503.0 0.0727 83086.4, 92092.8 0.0
BXD68 m 89611.0 18012.0   3 10399.0 0.201 74562.6, 109568.6 -0.12
BXD69 f 78898.0 10509.0   4 5255.0 0.1332 67340.2, 88089.6 -0.39
BXD69 m 67151.0 13324.0   5 5959.0 0.1984 52071.4, 81868.0 -0.71
BXD70 f 69979.0 11694.0   5 5230.0 0.1671 54401.2, 82257.2 -0.8
BXD70 m 93170.0 15258.0   5 6824.0 0.1638 82783.4, 119692.2 -0.03
BXD71 m 62339.0 0.0   1   0.0 0.0 62339.0, 62339.0 -0.84
BXD73 f 96722.0 17263.0   5 7720.0 0.1785 77466.6, 121029.6 0.42
BXD73 m 125931.0 41434.0   5 18530.0 0.329 95135.2, 194986.8 0.84
BXD75 f 83298.0 13111.0   5 5863.0 0.1574 67953.8, 100602.6 -0.19
BXD75 m 82851.0 13375.0   5 5981.0 0.1614 67801.0, 103339.2 -0.3
BXD77 f 92890.0 11240.0   2   7948.0 0.121 84942.6, 100838.4 0.24
BXD77 m 103869.0 7642.0   2   5404.0 0.0736 98465.0, 109272.4 0.26
BXD8 f 82935.0 17350.0   5 7759.0 0.2092 59882.8, 103070.4 -0.21
BXD8 m 95857.0 24940.0   5 11154.0 0.2602 68044.0, 129233.4 0.04
BXD80 f 83180.0 8879.0   5 3971.0 0.1067 74345.4, 97203.8 -0.2
BXD80 m 84950.0 9117.0   5 4077.0 0.1073 75012.2, 98484.0 -0.24
BXD81 f 76362.0 8670.0   5 3877.0 0.1135 63924.6, 88107.0 -0.51
BXD81 m 94976.0 23420.0   5 10474.0 0.2466 71657.2, 119821.2 0.02
BXD84 f 93235.0 14485.0   5 6478.0 0.1554 78827.6, 108300.8 0.26
BXD84 m 88280.0 14211.0   5 6355.0 0.161 73035.0, 110407.6 -0.16
BXD85 f 102984.0 7168.0   2   5069.0 0.0696 97914.8, 108052.2 0.7
BXD85 m 82839.0 7171.0   2   5071.0 0.0866 77768.2, 87910.2 -0.3
BXD86 f 64205.0 5593.0   5 2501.0 0.0871 58762.6, 70582.8 -1.06
BXD86 m 84853.0 7201.0   4 3601.0 0.0849 74179.4, 89467.8 -0.25
BXD87 f 66756.0 9440.0   5 4221.0 0.1414 56691.0, 77913.0 -0.94
BXD87 m 70056.0 11927.0   5 5334.0 0.1702 59184.8, 85174.6 -0.64
BXD89 f 75312.0 16651.0   5 7446.0 0.2211 61193.4, 103223.8 -0.55
BXD89 m 101202.0 15522.0   5 6942.0 0.1534 79918.0, 116963.6 0.18
BXD90 f 72397.0 7078.0   3 4087.0 0.0978 65753.0, 79841.4 -0.69
BXD90 m 172389.0 102919.0   3 59420.0 0.597 100812.8, 290335.2 2.06
BXD92 f 109326.0 0.0   1   0.0 0.0 109326.4, 109326.4 0.99
BXD92 m 334929.0 0.0   1   0.0 0.0 334929.4, 334929.4 6.35
BXD96 f 72657.0 8356.0   5 3737.0 0.115 65710.2, 85761.4 -0.67
BXD96 m 69202.0 12175.0   5 5445.0 0.1759 56038.6, 83335.2 -0.66
BXD97 f 69688.0 9250.0   5 4137.0 0.1327 54384.2, 79333.0 -0.81
BXD97 m 76530.0 14479.0   4 7239.0 0.1892 66363.6, 97927.8 -0.47
BXD98 f 67258.0 5205.0   2   3681.0 0.0774 63577.4, 70939.0 -0.92
BXD98 m 83372.0 28223.0   4 14111.0 0.3385 65137.6, 125157.0 -0.29
C57BL/6J f 194007.0 205826.0   5 92048.0 1.0609 91547.75, 561742.4 4.84
C57BL/6J m 109079.0 13415.0   5 5999.0 0.123 92205.0, 126100.2 0.39
DBA/2J f 64535.0 4896.0   5 2190.0 0.0759 59637.2, 71466.0 -1.04
DBA/2J m 68393.0 12603.0   5 5636.0 0.1843 53505.4, 84038.2 -0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 98985.8 13296.8629 125139.4566 72832.1434
BXD100 m 87526.76 13296.8629 113680.4166 61373.1034
BXD101 f 107342.4667 17166.1762 141106.6922 73578.2412
BXD101 m 92363.25 14866.3447 121603.927 63122.573
BXD102 f 93375.71 13296.8629 119529.3666 67222.0534
BXD102 m 80568.16 13296.8629 106721.8166 54414.5034
BXD11 f 78057.96 13296.8629 104211.6166 51904.3034
BXD11 m 70539.08 13296.8629 96692.7366 44385.4234
BXD13 f 87431.96 13296.8629 113585.6166 61278.3034
BXD13 m 85934.6 13296.8629 112088.2566 59780.9434
BXD14 f 90980.32 13296.8629 117133.9766 64826.6634
BXD14 m 123639.92 13296.8629 149793.5766 97486.2634
BXD15 f 86074.64 13296.8629 112228.2966 59920.9834
BXD15 m 106528.12 13296.8629 132681.7766 80374.4634
BXD16 f 98031.28 13296.8629 124184.9366 71877.6234
BXD16 m 92353.64 13296.8629 118507.2966 66199.9834
BXD2 f 74194.92 13296.8629 100348.5766 48041.2634
BXD2 m 87470.68 13296.8629 113624.3366 61317.0234
BXD21 f 98450.6 13296.8629 124604.2566 72296.9434
BXD21 m 75476.6333 12138.3196 99351.5462 51601.7205
BXD27 f 109158.24 13296.8629 135311.8966 83004.5834
BXD27 m 86805.4 13296.8629 112959.0566 60651.7434
BXD28 f 67350.6 13296.8629 93504.2566 41196.9434
BXD28 m 81394.64 13296.8629 107548.2966 55240.9834
BXD31 f 94078.72 13296.8629 120232.3766 67925.0634
BXD31 m 103781.1 14866.3447 133021.777 74540.423
BXD32 f 65139.68 13296.8629 91293.3366 38986.0234
BXD32 m 83353.4 13296.8629 109507.0566 57199.7434
BXD39 f 61995.76 13296.8629 88149.4166 35842.1034
BXD39 m 70610.0 13296.8629 96763.6566 44456.3434
BXD40 f 87407.32 13296.8629 113560.9766 61253.6634
BXD40 m 103177.72 13296.8629 129331.3766 77024.0634
BXD42 f 91077.64 13296.8629 117231.2966 64923.9834
BXD42 m 94581.4 13296.8629 120735.0566 68427.7434
BXD43 f 90098.4 13296.8629 116252.0566 63944.7434
BXD43 m 74335.44 13296.8629 100489.0966 48181.7834
BXD44 f 82034.32 13296.8629 108187.9766 55880.6634
BXD44 m 86341.8 13296.8629 112495.4566 60188.1434
BXD48 f 75311.68 13296.8629 101465.3366 49158.0234
BXD48 m 76036.84 13296.8629 102190.4966 49883.1834
BXD49 f 95558.7 14866.3447 124799.377 66318.023
BXD49 m 104664.52 13296.8629 130818.1766 78510.8634
BXD50 f 67044.76 13296.8629 93198.4166 40891.1034
BXD50 m 81310.56 13296.8629 107464.2166 55156.9034
BXD51 f 76184.24 13296.8629 102337.8966 50030.5834
BXD51 m 84770.24 13296.8629 110923.8966 58616.5834
BXD6 f 88933.92 13296.8629 115087.5766 62780.2634
BXD6 m 117358.15 14866.3447 146598.827 88117.473
BXD61 f 68352.4 13296.8629 94506.0566 42198.7434
BXD61 m 73958.12 13296.8629 100111.7766 47804.4634
BXD62 f 67649.96 13296.8629 93803.6166 41496.3034
BXD62 m 63586.4 13296.8629 89740.0566 37432.7434
BXD65 f 74959.8667 17166.1762 108724.0922 41195.6412
BXD65 m 80388.44 13296.8629 106542.0966 54234.7834
BXD66 f 80807.1 21024.1863 122159.662 39454.538
BXD66 m 92927.8 21024.1863 134280.362 51575.238
BXD68 f 87589.6 21024.1863 128942.162 46237.038
BXD68 m 89611.3333 17166.1762 123375.5588 55847.1078
BXD69 f 78897.55 14866.3447 108138.227 49656.873
BXD69 m 67151.44 13296.8629 93305.0966 40997.7834
BXD70 f 69978.76 13296.8629 96132.4166 43825.1034
BXD70 m 93169.76 13296.8629 119323.4166 67016.1034
BXD73 f 96721.76 13296.8629 122875.4166 70568.1034
BXD73 m 125930.88 13296.8629 152084.5366 99777.2234
BXD75 f 83298.16 13296.8629 109451.8166 57144.5034
BXD75 m 82851.4 13296.8629 109005.0566 56697.7434
BXD77 f 92890.5 21024.1863 134243.062 51537.938
BXD77 m 103868.7 21024.1863 145221.262 62516.138
BXD8 f 82935.36 13296.8629 109089.0166 56781.7034
BXD8 m 95857.2 13296.8629 122010.8566 69703.5434
BXD80 f 83180.44 13296.8629 109334.0966 57026.7834
BXD80 m 84950.44 13296.8629 111104.0966 58796.7834
BXD81 f 76361.96 13296.8629 102515.6166 50208.3034
BXD81 m 94976.32 13296.8629 121129.9766 68822.6634
BXD84 f 93234.88 13296.8629 119388.5366 67081.2234
BXD84 m 88279.88 13296.8629 114433.5366 62126.2234
BXD85 f 102983.5 21024.1863 144336.062 61630.938
BXD85 m 82839.2 21024.1863 124191.762 41486.638
BXD86 f 64205.0 13296.8629 90358.6566 38051.3434
BXD86 m 84853.05 14866.3447 114093.727 55612.373
BXD87 f 66756.44 13296.8629 92910.0966 40602.7834
BXD87 m 70056.12 13296.8629 96209.7766 43902.4634
BXD89 f 75311.84 13296.8629 101465.4966 49158.1834
BXD89 m 101202.48 13296.8629 127356.1366 75048.8234
BXD90 f 72396.6 17166.1762 106160.8255 38632.3745
BXD90 m 172388.7333 17166.1762 206152.9588 138624.5078
BXD96 f 72656.84 13296.8629 98810.4966 46503.1834
BXD96 m 69201.56 13296.8629 95355.2166 43047.9034
BXD97 f 69687.92 13296.8629 95841.5766 43534.2634
BXD97 m 76529.65 14866.3447 105770.327 47288.973
BXD98 f 67258.2 21024.1863 108610.762 25905.638
BXD98 m 83372.25 14866.3447 112612.927 54131.573
C57BL/6J f 194007.43 13296.8629 220161.0866 167853.7734
C57BL/6J m 109078.52 13296.8629 135232.1766 82924.8634
DBA/2J f 64535.48 13296.8629 90689.1366 38381.8234
DBA/2J m 68392.64 13296.8629 94546.2966 42238.9834


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 93256.28 9402.3019 111749.7079 74762.8521
BXD101 both 99852.8583 11354.3583 122185.7943 77519.9224
BXD102 both 86971.935 9402.3019 105465.3629 68478.5071
BXD11 both 74298.52 9402.3019 92791.9479 55805.0921
BXD13 both 86683.28 9402.3019 105176.7079 68189.8521
BXD14 both 107310.12 9402.3019 125803.5479 88816.6921
BXD15 both 96301.38 9402.3019 114794.8079 77807.9521
BXD16 both 95192.46 9402.3019 113685.8879 76699.0321
BXD2 both 80832.8 9402.3019 99326.2279 62339.3721
BXD21 both 86963.6167 9002.0188 104669.7259 69257.5074
BXD27 both 97981.82 9402.3019 116475.2479 79488.3921
BXD28 both 74372.62 9402.3019 92866.0479 55879.1921
BXD31 both 98929.91 9972.6472 118545.1525 79314.6675
BXD32 both 74246.54 9402.3019 92739.9679 55753.1121
BXD39 both 66302.88 9402.3019 84796.3079 47809.4521
BXD40 both 95292.52 9402.3019 113785.9479 76799.0921
BXD42 both 92829.52 9402.3019 111322.9479 74336.0921
BXD43 both 82216.92 9402.3019 100710.3479 63723.4921
BXD44 both 84188.06 9402.3019 102681.4879 65694.6321
BXD48 both 75674.26 9402.3019 94167.6879 57180.8321
BXD49 both 100111.61 9972.6472 119726.8525 80496.3675
BXD50 both 74177.66 9402.3019 92671.0879 55684.2321
BXD51 both 80477.24 9402.3019 98970.6679 61983.8121
BXD6 both 103146.035 9972.6472 122761.2775 83530.7925
BXD61 both 71155.26 9402.3019 89648.6879 52661.8321
BXD62 both 65618.18 9402.3019 84111.6079 47124.7521
BXD65 both 77674.1533 10856.8431 99028.5245 56319.7821
BXD66 both 86867.45 14866.3447 116108.127 57626.773
BXD68 both 88600.4667 13571.0539 115293.4307 61907.5027
BXD69 both 73024.495 9972.6472 92639.7375 53409.2525
BXD70 both 81574.26 9402.3019 100067.6879 63080.8321
BXD73 both 111326.32 9402.3019 129819.7479 92832.8921
BXD75 both 83074.78 9402.3019 101568.2079 64581.3521
BXD77 both 98379.6 14866.3447 127620.277 69138.923
BXD8 both 89396.28 9402.3019 107889.7079 70902.8521
BXD80 both 84065.44 9402.3019 102558.8679 65572.0121
BXD81 both 85669.14 9402.3019 104162.5679 67175.7121
BXD84 both 90757.38 9402.3019 109250.8079 72263.9521
BXD85 both 92911.35 14866.3447 122152.027 63670.673
BXD86 both 74529.025 9972.6472 94144.2675 54913.7825
BXD87 both 68406.28 9402.3019 86899.7079 49912.8521
BXD89 both 88257.16 9402.3019 106750.5879 69763.7321
BXD90 both 122392.6667 12138.3196 146267.5795 98517.7538
BXD96 both 70929.2 9402.3019 89422.6279 52435.7721
BXD97 both 73108.785 9972.6472 92724.0275 53493.5425
BXD98 both 75315.225 12874.6322 100638.3941 49992.0559
C57BL/6J both 151542.975 9402.3019 170036.4029 133049.5471
DBA/2J both 66464.06 9402.3019 84957.4879 47970.6321




  GWAS USING LINEAR MIXED MODELS