Project measure / variable:   Crusio1   rad_L

ID, description, units MPD:62075   rad_L   size of stratum radiatum (arbitrary units)    left  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
Procedure histopathology
Ontology mappings

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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means394429.0   None 400049.0   None
Median of the strain means387068.0   None 403649.0   None
SD of the strain means± 56159.0 ± 51724.0
Coefficient of variation (CV)0.1424 0.1293
Min–max range of strain means303375.0   –   654738.0   None 314118.0   –   561859.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3423849276.2491 3423849276.2491 0.3826 0.5366
strain 47 746135218988.376 15875217425.2846 1.7739 0.0022
sex:strain 47 393315123893.396 8368406891.3488 0.9351 0.5972
Residuals 343 3069620143210.85 8949329863.5885


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 108 (108)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
BXD1 f 439036.0 0.0   1   0.0 0.0 439035.6, 439035.6 0.79
BXD1 m 505736.0 0.0   1   0.0 0.0 505736.0, 505736.0 2.04
BXD100 f 399169.0 64245.0   5 28731.0 0.1609 306437.6, 474278.0 0.08
BXD100 m 391366.0 42622.0   5 19061.0 0.1089 339644.8, 457585.2 -0.17
BXD101 f 428326.0 41022.0   3 23684.0 0.0958 389294.4, 471084.8 0.6
BXD101 m 411744.0 57613.0   4 28806.0 0.1399 359411.2, 489580.6 0.23
BXD102 f 349459.0 67839.0   5 30339.0 0.1941 275573.6, 445134.0 -0.8
BXD102 m 347741.0 29791.0   5 13323.0 0.0857 303899.8, 378890.4 -1.01
BXD11 f 412561.0 61893.0   5 27679.0 0.15 323727.6, 493330.6 0.32
BXD11 m 379922.0 28622.0   5 12800.0 0.0753 338074.2, 407320.4 -0.39
BXD13 f 342514.0 12601.0   5 5635.0 0.0368 327667.0, 361258.4 -0.92
BXD13 m 319858.0 33474.0   5 14970.0 0.1047 288997.6, 373721.2 -1.55
BXD14 f 412775.0 92101.0   5 41189.0 0.2231 339160.2, 557003.4 0.33
BXD14 m 561859.0 273113.0   5 122140.0 0.4861 391070.4, 1043531.8 3.13
BXD15 f 386588.0 22488.0   5 10057.0 0.0582 360460.0, 420123.2 -0.14
BXD15 m 447656.0 16973.0   5 7591.0 0.0379 426539.6, 473982.6 0.92
BXD16 f 436007.0 30518.0   5 13648.0 0.07 390462.6, 468518.4 0.74
BXD16 m 419801.0 39685.0   5 17748.0 0.0945 368404.0, 478238.6 0.38
BXD18 f 396293.0 0.0   1   0.0 0.0 396293.0, 396293.0 0.03
BXD18 m 360786.0 0.0   1   0.0 0.0 360786.4, 360786.4 -0.76
BXD19 f 496132.0 0.0   1   0.0 0.0 496131.6, 496131.6 1.81
BXD19 m 406212.0 0.0   1   0.0 0.0 406211.6, 406211.6 0.12
BXD2 f 451772.0 30531.0   5 13654.0 0.0676 414341.0, 488799.2 1.02
BXD2 m 468310.0 45767.0   5 20468.0 0.0977 431463.4, 538980.0 1.32
BXD21 f 387685.0 86500.0   5 38684.0 0.2231 325379.2, 539870.4 -0.12
BXD21 m 358756.0 51063.0   6 20846.0 0.1423 297376.0, 428368.6 -0.8
BXD27 f 387868.0 45751.0   5 20461.0 0.118 318504.6, 440326.8 -0.12
BXD27 m 403765.0 60576.0   5 27090.0 0.15 316583.2, 476579.4 0.07
BXD28 f 371329.0 57927.0   5 25906.0 0.156 324204.6, 435789.8 -0.41
BXD28 m 407795.0 66114.0   5 29567.0 0.1621 343850.2, 489264.4 0.15
BXD31 f 368684.0 51096.0   5 22851.0 0.1386 317758.2, 445524.4 -0.46
BXD31 m 362684.0 47509.0   4 23755.0 0.131 305719.2, 419553.0 -0.72
BXD32 f 349030.0 30345.0   5 13571.0 0.0869 316046.6, 389628.6 -0.81
BXD32 m 386261.0 35797.0   5 16009.0 0.0927 324486.6, 415126.4 -0.27
BXD33 m 473658.0 0.0   1   0.0 0.0 473658.4, 473658.4 1.42
BXD34 f 502605.0 0.0   1   0.0 0.0 502605.0, 502605.0 1.93
BXD34 m 492643.0 0.0   1   0.0 0.0 492643.0, 492643.0 1.79
BXD39 f 354762.0 20720.0   5 9266.0 0.0584 340095.2, 391057.6 -0.71
BXD39 m 385155.0 33936.0   5 15177.0 0.0881 332277.0, 427107.4 -0.29
BXD40 f 393195.0 47860.0   5 21404.0 0.1217 351129.2, 453665.4 -0.02
BXD40 m 418599.0 38887.0   5 17391.0 0.0929 384016.8, 470569.2 0.36
BXD42 f 379903.0 31784.0   5 14214.0 0.0837 347265.4, 420108.6 -0.26
BXD42 m 373205.0 68340.0   5 30563.0 0.1831 318812.6, 472572.0 -0.52
BXD43 f 429922.0 39289.0   5 17571.0 0.0914 390519.2, 488131.2 0.63
BXD43 m 395326.0 20394.0   5 9121.0 0.0516 377355.0, 419804.6 -0.09
BXD44 f 352822.0 42749.0   5 19118.0 0.1212 302726.4, 403512.2 -0.74
BXD44 m 394287.0 51994.0   5 23252.0 0.1319 323914.0, 453990.6 -0.11
BXD48 f 406986.0 51201.0   5 22898.0 0.1258 324334.8, 449554.0 0.22
BXD48 m 405556.0 57529.0   5 25728.0 0.1419 321802.2, 479313.2 0.11
BXD49 f 366506.0 59263.0   4 29631.0 0.1617 314260.0, 424034.8 -0.5
BXD49 m 410395.0 58182.0   5 26020.0 0.1418 314719.2, 469117.6 0.2
BXD50 f 303375.0 25534.0   5 11419.0 0.0842 265636.0, 332539.8 -1.62
BXD50 m 318962.0 54289.0   5 24279.0 0.1702 247725.2, 372216.6 -1.57
BXD51 f 347328.0 33067.0   5 14788.0 0.0952 312127.6, 391081.6 -0.84
BXD51 m 365495.0 30441.0   5 13614.0 0.0833 323357.4, 395752.4 -0.67
BXD6 f 383602.0 89496.0   5 40024.0 0.2333 260967.4, 485430.8 -0.19
BXD6 m 429047.0 49497.0   4 24748.0 0.1154 392320.8, 501264.6 0.56
BXD61 f 310429.0 21848.0   5 9771.0 0.0704 285209.0, 336021.0 -1.5
BXD61 m 314118.0 22007.0   5 9842.0 0.0701 299265.8, 349071.6 -1.66
BXD62 f 322897.0 41867.0   5 18723.0 0.1297 267305.2, 384698.2 -1.27
BXD62 m 334814.0 22443.0   5 10037.0 0.067 311912.8, 361862.0 -1.26
BXD65 f 314034.0 12243.0   3 7068.0 0.039 305690.2, 328089.0 -1.43
BXD65 m 347623.0 46981.0   5 21010.0 0.1351 283716.6, 414463.8 -1.01
BXD66 f 388126.0 37791.0   2   26722.0 0.0974 361404.0, 414848.2 -0.11
BXD66 m 400090.0 63361.0   2   44803.0 0.1584 355287.0, 444892.8 0.0
BXD68 f 436199.0 102268.0   2   72314.0 0.2345 363884.8, 508513.6 0.74
BXD68 m 454011.0 58875.0   3 33992.0 0.1297 412311.2, 521360.0 1.04
BXD69 f 387068.0 36925.0   4 18463.0 0.0954 349690.4, 431451.8 -0.13
BXD69 m 327569.0 60154.0   5 26902.0 0.1836 248960.4, 398622.8 -1.4
BXD70 f 357694.0 38530.0   5 17231.0 0.1077 313935.4, 415646.4 -0.65
BXD70 m 408824.0 52760.0   5 23595.0 0.1291 343234.4, 474506.2 0.17
BXD71 m 436477.0 0.0   1   0.0 0.0 436477.0, 436477.0 0.7
BXD73 f 442541.0 27319.0   5 12217.0 0.0617 402267.0, 468093.0 0.86
BXD73 m 414924.0 65184.0   5 29151.0 0.1571 335117.0, 513268.0 0.29
BXD75 f 376947.0 10757.0   5 4810.0 0.0285 367401.0, 391530.0 -0.31
BXD75 m 365347.0 24038.0   5 10750.0 0.0658 330881.8, 394770.8 -0.67
BXD77 f 473643.0 99448.0   2   70320.0 0.21 403322.8, 543963.4 1.41
BXD77 m 512922.0 39449.0   2   27895.0 0.0769 485026.8, 540816.4 2.18
BXD8 f 358915.0 61136.0   5 27341.0 0.1703 295508.4, 432405.0 -0.63
BXD8 m 407057.0 75070.0   5 33572.0 0.1844 313187.0, 511525.0 0.14
BXD80 f 385015.0 24843.0   5 11110.0 0.0645 359400.2, 413008.8 -0.17
BXD80 m 403649.0 41243.0   5 18444.0 0.1022 353267.2, 445544.0 0.07
BXD81 f 401249.0 30937.0   5 13835.0 0.0771 347975.2, 428846.2 0.12
BXD81 m 439837.0 36627.0   5 16380.0 0.0833 403939.0, 485246.6 0.77
BXD84 f 385437.0 86902.0   5 38864.0 0.2255 297179.0, 514149.0 -0.16
BXD84 m 381221.0 35800.0   5 16010.0 0.0939 330611.4, 421226.2 -0.36
BXD85 f 417461.0 40836.0   2   28875.0 0.0978 388585.4, 446336.0 0.41
BXD85 m 337005.0 20525.0   2   14513.0 0.0609 322492.2, 351518.6 -1.22
BXD86 f 400342.0 49633.0   5 22197.0 0.124 334017.8, 467050.4 0.11
BXD86 m 445293.0 25904.0   4 12952.0 0.0582 422695.0, 474717.4 0.87
BXD87 f 331288.0 38144.0   5 17058.0 0.1151 283595.6, 371156.2 -1.12
BXD87 m 327217.0 27759.0   5 12414.0 0.0848 293367.6, 365209.6 -1.41
BXD89 f 393633.0 49047.0   5 21935.0 0.1246 353875.0, 449440.4 -0.01
BXD89 m 453202.0 35817.0   5 16018.0 0.079 415167.4, 511323.2 1.03
BXD90 f 381549.0 9733.0   3 5619.0 0.0255 375510.0, 392776.4 -0.23
BXD90 m 396122.0 70763.0   3 40855.0 0.1786 329764.2, 470590.8 -0.08
BXD92 f 440596.0 0.0   1   0.0 0.0 440596.4, 440596.4 0.82
BXD92 m 407044.0 0.0   1   0.0 0.0 407043.8, 407043.8 0.14
BXD96 f 397703.0 59463.0   5 26593.0 0.1495 334828.2, 476532.6 0.06
BXD96 m 347508.0 24598.0   5 11001.0 0.0708 310956.2, 374074.8 -1.02
BXD97 f 370738.0 56871.0   5 25433.0 0.1534 322300.0, 465942.6 -0.42
BXD97 m 364903.0 29183.0   4 14591.0 0.08 338868.0, 404068.4 -0.68
BXD98 f 363664.0 99478.0   2   70341.0 0.2735 293323.0, 434005.6 -0.55
BXD98 m 410332.0 38440.0   4 19220.0 0.0937 360803.2, 449558.4 0.2
C57BL/6J f 654738.0 707167.0   5 316255.0 1.0801 295063.6, 1918833.6 4.64
C57BL/6J m 350999.0 40201.0   5 17978.0 0.1145 315161.2, 401332.2 -0.95
DBA/2J f 376605.0 59274.0   5 26508.0 0.1574 306867.8, 461895.2 -0.32
DBA/2J m 412024.0 36690.0   5 16408.0 0.089 389604.6, 476782.6 0.23


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 399169.36 42306.8076 482382.8011 315955.9189
BXD100 m 391366.44 42306.8076 474579.8811 308152.9989
BXD101 f 428326.0667 54617.8538 535754.1572 320897.9762
BXD101 m 411744.3 47300.4489 504779.7555 318708.8445
BXD102 f 349458.52 42306.8076 432671.9611 266245.0789
BXD102 m 347741.36 42306.8076 430954.8011 264527.9189
BXD11 f 412561.12 42306.8076 495774.5611 329347.6789
BXD11 m 379921.96 42306.8076 463135.4011 296708.5189
BXD13 f 342514.24 42306.8076 425727.6811 259300.7989
BXD13 m 319857.76 42306.8076 403071.2011 236644.3189
BXD14 f 412775.12 42306.8076 495988.5611 329561.6789
BXD14 m 561859.32 42306.8076 645072.7611 478645.8789
BXD15 f 386587.64 42306.8076 469801.0811 303374.1989
BXD15 m 447656.32 42306.8076 530869.7611 364442.8789
BXD16 f 436006.84 42306.8076 519220.2811 352793.3989
BXD16 m 419800.88 42306.8076 503014.3211 336587.4389
BXD2 f 451771.72 42306.8076 534985.1611 368558.2789
BXD2 m 468310.32 42306.8076 551523.7611 385096.8789
BXD21 f 387685.32 42306.8076 470898.7611 304471.8789
BXD21 m 358755.9333 38620.6548 434719.0646 282792.8021
BXD27 f 387868.08 42306.8076 471081.5211 304654.6389
BXD27 m 403765.16 42306.8076 486978.6011 320551.7189
BXD28 f 371328.6 42306.8076 454542.0411 288115.1589
BXD28 m 407794.84 42306.8076 491008.2811 324581.3989
BXD31 f 368684.4 42306.8076 451897.8411 285470.9589
BXD31 m 362684.4 47300.4489 455719.8555 269648.9445
BXD32 f 349029.76 42306.8076 432243.2011 265816.3189
BXD32 m 386261.08 42306.8076 469474.5211 303047.6389
BXD39 f 354762.2 42306.8076 437975.6411 271548.7589
BXD39 m 385155.04 42306.8076 468368.4811 301941.5989
BXD40 f 393195.16 42306.8076 476408.6011 309981.7189
BXD40 m 418598.86 42306.8076 501812.3011 335385.4189
BXD42 f 379903.12 42306.8076 463116.5611 296689.6789
BXD42 m 373205.16 42306.8076 456418.6011 289991.7189
BXD43 f 429922.44 42306.8076 513135.8811 346708.9989
BXD43 m 395326.16 42306.8076 478539.6011 312112.7189
BXD44 f 352821.88 42306.8076 436035.3211 269608.4389
BXD44 m 394287.36 42306.8076 477500.8011 311073.9189
BXD48 f 406986.48 42306.8076 490199.9211 323773.0389
BXD48 m 405555.56 42306.8076 488769.0011 322342.1189
BXD49 f 366505.5 47300.4489 459540.9555 273470.0445
BXD49 m 410394.92 42306.8076 493608.3611 327181.4789
BXD50 f 303374.64 42306.8076 386588.0811 220161.1989
BXD50 m 318962.04 42306.8076 402175.4811 235748.5989
BXD51 f 347328.0 42306.8076 430541.4411 264114.5589
BXD51 m 365494.76 42306.8076 448708.2011 282281.3189
BXD6 f 383601.72 42306.8076 466815.1611 300388.2789
BXD6 m 429047.45 47300.4489 522082.9055 336011.9945
BXD61 f 310428.8 42306.8076 393642.2411 227215.3589
BXD61 m 314118.12 42306.8076 397331.5611 230904.6789
BXD62 f 322896.68 42306.8076 406110.1211 239683.2389
BXD62 m 334813.64 42306.8076 418027.0811 251600.1989
BXD65 f 314034.1333 54617.8538 421462.2238 206606.0428
BXD65 m 347622.52 42306.8076 430835.9611 264409.0789
BXD66 f 388126.1 66892.9363 519698.1029 256554.0971
BXD66 m 400089.9 66892.9363 531661.9029 268517.8971
BXD68 f 436199.2 66892.9363 567771.2029 304627.1971
BXD68 m 454011.4667 54617.8538 561439.5572 346583.3762
BXD69 f 387067.7 47300.4489 480103.1555 294032.2445
BXD69 m 327569.48 42306.8076 410782.9211 244356.0389
BXD70 f 357693.52 42306.8076 440906.9611 274480.0789
BXD70 m 408824.4 42306.8076 492037.8411 325610.9589
BXD73 f 442540.88 42306.8076 525754.3211 359327.4389
BXD73 m 414924.12 42306.8076 498137.5611 331710.6789
BXD75 f 376947.08 42306.8076 460160.5211 293733.6389
BXD75 m 365347.4 42306.8076 448560.8411 282133.9589
BXD77 f 473643.1 66892.9363 605215.1029 342071.0971
BXD77 m 512921.6 66892.9363 644493.6029 381349.5971
BXD8 f 358915.48 42306.8076 442128.9211 275702.0389
BXD8 m 407057.0 42306.8076 490270.4411 323843.5589
BXD80 f 385015.36 42306.8076 468228.8011 301801.9189
BXD80 m 403648.84 42306.8076 486862.2811 320435.3989
BXD81 f 401248.76 42306.8076 484462.2011 318035.3189
BXD81 m 439837.08 42306.8076 523050.5211 356623.6389
BXD84 f 385437.08 42306.8076 468650.5211 302223.6389
BXD84 m 381220.68 42306.8076 464434.1211 298007.2389
BXD85 f 417460.7 66892.9363 549032.7029 285888.6971
BXD85 m 337005.4 66892.9363 468577.4029 205433.3971
BXD86 f 400342.12 42306.8076 483555.5611 317128.6789
BXD86 m 445293.25 47300.4489 538328.7055 352257.7945
BXD87 f 331287.84 42306.8076 414501.2811 248074.3989
BXD87 m 327217.2 42306.8076 410430.6411 244003.7589
BXD89 f 393632.72 42306.8076 476846.1611 310419.2789
BXD89 m 453202.4 42306.8076 536415.8411 369988.9589
BXD90 f 381548.8 54617.8538 488976.8905 274120.7095
BXD90 m 396121.6667 54617.8538 503549.7572 288693.5762
BXD96 f 397703.36 42306.8076 480916.8011 314489.9189
BXD96 m 347508.0 42306.8076 430721.4411 264294.5589
BXD97 f 370738.12 42306.8076 453951.5611 287524.6789
BXD97 m 364903.35 47300.4489 457938.8055 271867.8945
BXD98 f 363664.3 66892.9363 495236.3029 232092.2971
BXD98 m 410332.2 47300.4489 503367.6555 317296.7445
C57BL/6J f 654738.2 42306.8076 737951.6411 571524.7589
C57BL/6J m 350999.0 42306.8076 434212.4411 267785.5589
DBA/2J f 376604.56 42306.8076 459818.0011 293391.1189
DBA/2J m 412023.68 42306.8076 495237.1211 328810.2389


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 395267.9 29915.4306 454108.6885 336427.1115
BXD101 both 420035.1833 36126.3146 491092.1862 348978.1805
BXD102 both 348599.94 29915.4306 407440.7285 289759.1515
BXD11 both 396241.54 29915.4306 455082.3285 337400.7515
BXD13 both 331186.0 29915.4306 390026.7885 272345.2115
BXD14 both 487317.22 29915.4306 546158.0085 428476.4315
BXD15 both 417121.98 29915.4306 475962.7685 358281.1915
BXD16 both 427903.86 29915.4306 486744.6485 369063.0715
BXD2 both 460041.02 29915.4306 518881.8085 401200.2315
BXD21 both 373220.6267 28641.8442 429556.3926 316884.8607
BXD27 both 395816.62 29915.4306 454657.4085 336975.8315
BXD28 both 389561.72 29915.4306 448402.5085 330720.9315
BXD31 both 365684.4 31730.1057 428094.4808 303274.3192
BXD32 both 367645.42 29915.4306 426486.2085 308804.6315
BXD39 both 369958.62 29915.4306 428799.4085 311117.8315
BXD40 both 405897.01 29915.4306 464737.7985 347056.2215
BXD42 both 376554.14 29915.4306 435394.9285 317713.3515
BXD43 both 412624.3 29915.4306 471465.0885 353783.5115
BXD44 both 373554.62 29915.4306 432395.4085 314713.8315
BXD48 both 406271.02 29915.4306 465111.8085 347430.2315
BXD49 both 388450.21 31730.1057 450860.2908 326040.1292
BXD50 both 311168.34 29915.4306 370009.1285 252327.5515
BXD51 both 356411.38 29915.4306 415252.1685 297570.5915
BXD6 both 406324.585 31730.1057 468734.6658 343914.5042
BXD61 both 312273.46 29915.4306 371114.2485 253432.6715
BXD62 both 328855.16 29915.4306 387695.9485 270014.3715
BXD65 both 330828.3267 34543.3638 398771.8168 262884.8365
BXD66 both 394108.0 47300.4489 487143.4555 301072.5445
BXD68 both 445105.3333 43179.2047 530034.696 360175.9707
BXD69 both 357318.59 31730.1057 419728.6708 294908.5092
BXD70 both 383258.96 29915.4306 442099.7485 324418.1715
BXD73 both 428732.5 29915.4306 487573.2885 369891.7115
BXD75 both 371147.24 29915.4306 429988.0285 312306.4515
BXD77 both 493282.35 47300.4489 586317.8055 400246.8945
BXD8 both 382986.24 29915.4306 441827.0285 324145.4515
BXD80 both 394332.1 29915.4306 453172.8885 335491.3115
BXD81 both 420542.92 29915.4306 479383.7085 361702.1315
BXD84 both 383328.88 29915.4306 442169.6685 324488.0915
BXD85 both 377233.05 47300.4489 470268.5055 284197.5945
BXD86 both 422817.685 31730.1057 485227.7658 360407.6042
BXD87 both 329252.52 29915.4306 388093.3085 270411.7315
BXD89 both 423417.56 29915.4306 482258.3485 364576.7715
BXD90 both 388835.2333 38620.6548 464798.3646 312872.1021
BXD96 both 372605.68 29915.4306 431446.4685 313764.8915
BXD97 both 367820.735 31730.1057 430230.8158 305410.6542
BXD98 both 386998.25 40963.3904 467569.3179 306427.1821
C57BL/6J both 502868.6 29915.4306 561709.3885 444027.8115
DBA/2J both 394314.12 29915.4306 453154.9085 335473.3315




  GWAS USING LINEAR MIXED MODELS

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