Project measure / variable:   Crusio1   oriens_L

ID, description, units MPD:62070   oriens_L   size of stratum oriens (arbitrary units)    left  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
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  STRAIN COMPARISON PLOT
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Crusio1 - size of stratum oriens (arbitrary units) left



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means492763.0   None 474345.0   None
Median of the strain means473926.0   None 465515.0   None
SD of the strain means± 82605.0 ± 69138.0
Coefficient of variation (CV)0.1676 0.1458
Min–max range of strain means368433.0   –   780184.0   None 352797.0   –   676071.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11669368553.3647 11669368553.3647 0.7389 0.3906
strain 47 1438124869775.05 30598401484.5755 1.9376 0.0005
sex:strain 47 667683331193.612 14206028323.2683 0.8996 0.6621
Residuals 343 5416760393368.83 15792304353.845


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 550027.0 0.0   1   0.0 0.0 550027.2, 550027.2 0.69
BXD1 m 552636.0 0.0   1   0.0 0.0 552636.4, 552636.4 1.13
BXD100 f 517408.0 110751.0   5 49529.0 0.214 398423.4, 639974.6 0.3
BXD100 m 506945.0 67225.0   5 30064.0 0.1326 446294.8, 614039.4 0.47
BXD101 f 503687.0 61212.0   3 35341.0 0.1215 445172.2, 567280.6 0.13
BXD101 m 514225.0 102490.0   4 51245.0 0.1993 411380.4, 627748.6 0.58
BXD102 f 399138.0 115968.0   5 51862.0 0.2905 318896.8, 603469.6 -1.13
BXD102 m 444579.0 50388.0   5 22534.0 0.1133 365677.6, 492154.8 -0.43
BXD11 f 513098.0 74648.0   5 33383.0 0.1455 438055.4, 602175.8 0.25
BXD11 m 476300.0 89271.0   5 39923.0 0.1874 358108.2, 578513.6 0.03
BXD13 f 405533.0 46151.0   5 20639.0 0.1138 341633.8, 455361.0 -1.06
BXD13 m 352797.0 54194.0   5 24236.0 0.1536 290325.2, 432706.6 -1.76
BXD14 f 464534.0 137674.0   5 61570.0 0.2964 324352.8, 613533.4 -0.34
BXD14 m 604997.0 282545.0   5 126358.0 0.467 389360.4, 1093068.0 1.89
BXD15 f 473926.0 47279.0   5 21144.0 0.0998 422276.4, 521233.6 -0.23
BXD15 m 508459.0 40575.0   5 18146.0 0.0798 447001.6, 541368.6 0.49
BXD16 f 538347.0 45749.0   5 20460.0 0.085 471859.4, 589966.4 0.55
BXD16 m 581638.0 193681.0   5 86617.0 0.333 421409.8, 910487.2 1.55
BXD18 f 466204.0 0.0   1   0.0 0.0 466204.4, 466204.4 -0.32
BXD18 m 403950.0 0.0   1   0.0 0.0 403950.2, 403950.2 -1.02
BXD19 f 739052.0 0.0   1   0.0 0.0 739052.0, 739052.0 2.98
BXD19 m 442280.0 0.0   1   0.0 0.0 442279.6, 442279.6 -0.46
BXD2 f 558038.0 94448.0   5 42238.0 0.1692 478575.6, 689531.0 0.79
BXD2 m 503850.0 62841.0   5 28103.0 0.1247 420638.2, 563383.6 0.43
BXD21 f 480538.0 108690.0   5 48608.0 0.2262 390007.2, 669768.8 -0.15
BXD21 m 436878.0 55812.0   6 22785.0 0.1278 369640.4, 491225.2 -0.54
BXD27 f 407209.0 53578.0   5 23961.0 0.1316 317822.4, 453610.4 -1.04
BXD27 m 437957.0 127862.0   5 57182.0 0.292 267128.2, 609497.2 -0.53
BXD28 f 412256.0 45796.0   5 20481.0 0.1111 359327.2, 466621.0 -0.97
BXD28 m 437851.0 53825.0   5 24071.0 0.1229 375434.6, 499026.6 -0.53
BXD31 f 414660.0 45539.0   5 20366.0 0.1098 366303.4, 472543.0 -0.95
BXD31 m 376474.0 67563.0   4 33781.0 0.1795 303145.0, 443172.0 -1.42
BXD32 f 469638.0 78043.0   5 34902.0 0.1662 392159.4, 578948.8 -0.28
BXD32 m 490090.0 70944.0   5 31727.0 0.1448 415589.6, 604162.0 0.23
BXD33 m 617700.0 0.0   1   0.0 0.0 617699.8, 617699.8 2.07
BXD34 f 639055.0 0.0   1   0.0 0.0 639054.6, 639054.6 1.77
BXD34 m 547831.0 0.0   1   0.0 0.0 547831.4, 547831.4 1.06
BXD39 f 435300.0 65986.0   5 29510.0 0.1516 360757.8, 503913.0 -0.7
BXD39 m 429321.0 52413.0   5 23440.0 0.1221 377435.6, 514630.8 -0.65
BXD40 f 475742.0 94314.0   5 42179.0 0.1982 393595.6, 624022.2 -0.21
BXD40 m 446581.0 50345.0   5 22515.0 0.1127 384027.8, 506599.0 -0.4
BXD42 f 488199.0 53802.0   5 24061.0 0.1102 418105.8, 563868.8 -0.06
BXD42 m 477082.0 92341.0   5 41296.0 0.1936 388118.8, 613835.0 0.04
BXD43 f 526908.0 101727.0   5 45494.0 0.1931 437975.6, 699951.8 0.41
BXD43 m 477550.0 62110.0   5 27776.0 0.1301 412663.4, 539889.2 0.05
BXD44 f 431137.0 42042.0   5 18802.0 0.0975 358540.0, 458349.0 -0.75
BXD44 m 508934.0 69964.0   5 31289.0 0.1375 430688.0, 608298.4 0.5
BXD48 f 535412.0 103630.0   5 46345.0 0.1936 423575.2, 669583.8 0.52
BXD48 m 520405.0 120218.0   5 53763.0 0.231 416250.4, 687881.0 0.67
BXD49 f 464700.0 112495.0   4 56248.0 0.2421 333069.0, 583583.4 -0.34
BXD49 m 454061.0 91347.0   5 40852.0 0.2012 299376.4, 536764.8 -0.29
BXD50 f 391114.0 61185.0   5 27363.0 0.1564 336231.0, 486233.2 -1.23
BXD50 m 359602.0 70373.0   5 31472.0 0.1957 280745.0, 459455.4 -1.66
BXD51 f 428494.0 42837.0   5 19157.0 0.1 381380.2, 491825.8 -0.78
BXD51 m 445097.0 60111.0   5 26883.0 0.1351 372717.4, 517698.2 -0.42
BXD6 f 446648.0 77625.0   5 34715.0 0.1738 347168.0, 543627.0 -0.56
BXD6 m 488754.0 77057.0   4 38528.0 0.1577 422412.6, 576526.0 0.21
BXD61 f 368433.0 39920.0   5 17853.0 0.1083 311239.4, 414864.0 -1.51
BXD61 m 419149.0 87427.0   5 39099.0 0.2086 327626.2, 564029.2 -0.8
BXD62 f 413396.0 55020.0   5 24606.0 0.1331 364926.4, 504427.8 -0.96
BXD62 m 385475.0 22334.0   5 9988.0 0.0579 363108.4, 410301.0 -1.29
BXD65 f 410598.0 33495.0   3 19338.0 0.0816 376095.0, 442984.6 -0.99
BXD65 m 426936.0 58491.0   5 26158.0 0.137 350258.2, 497677.6 -0.69
BXD66 f 542015.0 72665.0   2   51382.0 0.1341 490632.8, 593396.8 0.6
BXD66 m 495098.0 159700.0   2   112925.0 0.3226 382172.6, 608022.6 0.3
BXD68 f 516738.0 177967.0   2   125842.0 0.3444 390896.2, 642580.0 0.29
BXD68 m 465515.0 39560.0   3 22840.0 0.085 419974.8, 491376.6 -0.13
BXD69 f 454852.0 187328.0   4 93664.0 0.4118 323158.6, 728216.2 -0.46
BXD69 m 380526.0 75698.0   5 33853.0 0.1989 278474.2, 489349.8 -1.36
BXD70 f 413443.0 62808.0   5 28089.0 0.1519 332478.2, 492653.6 -0.96
BXD70 m 468437.0 103776.0   5 46410.0 0.2215 345857.8, 628831.6 -0.09
BXD71 m 458527.0 0.0   1   0.0 0.0 458526.6, 458526.6 -0.23
BXD73 f 605805.0 77902.0   5 34839.0 0.1286 533090.4, 720079.2 1.37
BXD73 m 519390.0 64450.0   5 28823.0 0.1241 443760.8, 614830.4 0.65
BXD75 f 451851.0 25931.0   5 11597.0 0.0574 426579.8, 495577.6 -0.5
BXD75 m 447228.0 53759.0   5 24042.0 0.1202 370468.6, 497041.2 -0.39
BXD77 f 585464.0 61207.0   2   43280.0 0.1045 542183.8, 628743.2 1.12
BXD77 m 676071.0 61356.0   2   43385.0 0.0908 632686.0, 719456.8 2.92
BXD8 f 510913.0 118133.0   5 52831.0 0.2312 389973.4, 677861.2 0.22
BXD8 m 628004.0 221642.0   5 99121.0 0.3529 350869.2, 879259.4 2.22
BXD80 f 419441.0 73776.0   5 32994.0 0.1759 323910.6, 502587.6 -0.89
BXD80 m 414367.0 34015.0   5 15212.0 0.0821 372531.4, 464056.6 -0.87
BXD81 f 558816.0 124351.0   5 55611.0 0.2225 422020.4, 762729.2 0.8
BXD81 m 579445.0 90994.0   5 40694.0 0.157 467732.6, 669584.6 1.52
BXD84 f 448385.0 162210.0   5 72543.0 0.3618 346302.2, 728199.2 -0.54
BXD84 m 445841.0 56809.0   5 25406.0 0.1274 387402.8, 530850.4 -0.41
BXD85 f 522852.0 79068.0   2   55910.0 0.1512 466941.8, 578761.4 0.36
BXD85 m 388694.0 11349.0   2   8025.0 0.0292 380668.6, 396718.6 -1.24
BXD86 f 497157.0 54601.0   5 24418.0 0.1098 436974.2, 567231.2 0.05
BXD86 m 510690.0 29987.0   4 14994.0 0.0587 475868.2, 548670.4 0.53
BXD87 f 410326.0 96533.0   5 43171.0 0.2353 306723.0, 544659.0 -1.0
BXD87 m 387166.0 29879.0   5 13362.0 0.0772 350597.6, 427559.4 -1.26
BXD89 f 455243.0 104876.0   5 46902.0 0.2304 356328.0, 632050.0 -0.45
BXD89 m 537721.0 98595.0   5 44093.0 0.1834 452209.2, 669156.6 0.92
BXD90 f 591051.0 53155.0   3 30689.0 0.0899 532121.2, 635379.0 1.19
BXD90 m 504480.0 109653.0   3 63308.0 0.2174 400827.4, 619281.0 0.44
BXD92 f 589225.0 0.0   1   0.0 0.0 589225.2, 589225.2 1.17
BXD92 m 483100.0 0.0   1   0.0 0.0 483100.4, 483100.4 0.13
BXD96 f 580103.0 80654.0   5 36070.0 0.139 497597.8, 678504.0 1.06
BXD96 m 432388.0 47942.0   5 21440.0 0.1109 365286.8, 492638.0 -0.61
BXD97 f 498581.0 140116.0   5 62662.0 0.281 386531.2, 740247.2 0.07
BXD97 m 414762.0 24271.0   4 12136.0 0.0585 393193.0, 448213.0 -0.86
BXD98 f 469648.0 241790.0   2   170971.0 0.5148 298677.0, 640619.0 -0.28
BXD98 m 500259.0 108474.0   4 54237.0 0.2168 401116.4, 653197.6 0.37
C57BL/6J f 780184.0 800978.0   5 358208.0 1.0267 345512.4, 2208952.2 3.48
C57BL/6J m 413027.0 41191.0   5 18421.0 0.0997 363795.4, 455002.0 -0.89
DBA/2J f 445904.0 68063.0   5 30439.0 0.1526 392290.0, 556798.6 -0.57
DBA/2J m 461858.0 23483.0   5 10502.0 0.0508 430705.6, 485254.4 -0.18


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 517407.8 56200.1857 627948.1858 406867.4142
BXD100 m 506944.68 56200.1857 617485.0658 396404.2942
BXD101 f 503686.9333 72554.1277 646393.9578 360979.9089
BXD101 m 514225.15 62833.7178 637813.0585 390637.2415
BXD102 f 399137.84 56200.1857 509678.2258 288597.4542
BXD102 m 444579.4 56200.1857 555119.7858 334039.0142
BXD11 f 513098.24 56200.1857 623638.6258 402557.8542
BXD11 m 476299.64 56200.1857 586840.0258 365759.2542
BXD13 f 405533.4 56200.1857 516073.7858 294993.0142
BXD13 m 352796.72 56200.1857 463337.1058 242256.3342
BXD14 f 464534.0 56200.1857 575074.3858 353993.6142
BXD14 m 604997.36 56200.1857 715537.7458 494456.9742
BXD15 f 473926.36 56200.1857 584466.7458 363385.9742
BXD15 m 508459.44 56200.1857 618999.8258 397919.0542
BXD16 f 538347.0 56200.1857 648887.3858 427806.6142
BXD16 m 581637.76 56200.1857 692178.1458 471097.3742
BXD2 f 558038.08 56200.1857 668578.4658 447497.6942
BXD2 m 503850.08 56200.1857 614390.4658 393309.6942
BXD21 f 480538.44 56200.1857 591078.8258 369998.0542
BXD21 m 436877.9333 51303.5157 537787.0381 335968.8286
BXD27 f 407209.44 56200.1857 517749.8258 296669.0542
BXD27 m 437956.92 56200.1857 548497.3058 327416.5342
BXD28 f 412255.92 56200.1857 522796.3058 301715.5342
BXD28 m 437851.32 56200.1857 548391.7058 327310.9342
BXD31 f 414659.88 56200.1857 525200.2658 304119.4942
BXD31 m 376473.7 62833.7178 500061.6085 252885.7915
BXD32 f 469638.0 56200.1857 580178.3858 359097.6142
BXD32 m 490090.04 56200.1857 600630.4258 379549.6542
BXD39 f 435300.4 56200.1857 545840.7858 324760.0142
BXD39 m 429320.84 56200.1857 539861.2258 318780.4542
BXD40 f 475742.24 56200.1857 586282.6258 365201.8542
BXD40 m 446581.2 56200.1857 557121.5858 336040.8142
BXD42 f 488198.52 56200.1857 598738.9058 377658.1342
BXD42 m 477082.0 56200.1857 587622.3858 366541.6142
BXD43 f 526907.84 56200.1857 637448.2258 416367.4542
BXD43 m 477550.28 56200.1857 588090.6658 367009.8942
BXD44 f 431137.04 56200.1857 541677.4258 320596.6542
BXD44 m 508933.92 56200.1857 619474.3058 398393.5342
BXD48 f 535411.92 56200.1857 645952.3058 424871.5342
BXD48 m 520404.92 56200.1857 630945.3058 409864.5342
BXD49 f 464699.7 62833.7178 588287.6085 341111.7915
BXD49 m 454061.16 56200.1857 564601.5458 343520.7742
BXD50 f 391114.16 56200.1857 501654.5458 280573.7742
BXD50 m 359601.56 56200.1857 470141.9458 249061.1742
BXD51 f 428493.76 56200.1857 539034.1458 317953.3742
BXD51 m 445097.28 56200.1857 555637.6658 334556.8942
BXD6 f 446648.24 56200.1857 557188.6258 336107.8542
BXD6 m 488753.85 62833.7178 612341.7585 365165.9415
BXD61 f 368433.36 56200.1857 478973.7458 257892.9742
BXD61 m 419149.36 56200.1857 529689.7458 308608.9742
BXD62 f 413396.48 56200.1857 523936.8658 302856.0942
BXD62 m 385474.68 56200.1857 496015.0658 274934.2942
BXD65 f 410597.6 72554.1277 553304.6245 267890.5755
BXD65 m 426936.0 56200.1857 537476.3858 316395.6142
BXD66 f 542014.8 88860.2958 716794.4963 367235.1037
BXD66 m 495097.6 88860.2958 669877.2963 320317.9037
BXD68 f 516738.1 88860.2958 691517.7963 341958.4037
BXD68 m 465515.0 72554.1277 608222.0245 322807.9755
BXD69 f 454851.65 62833.7178 578439.5585 331263.7415
BXD69 m 380525.72 56200.1857 491066.1058 269985.3342
BXD70 f 413443.0 56200.1857 523983.3858 302902.6142
BXD70 m 468436.72 56200.1857 578977.1058 357896.3342
BXD73 f 605805.28 56200.1857 716345.6658 495264.8942
BXD73 m 519389.92 56200.1857 629930.3058 408849.5342
BXD75 f 451850.84 56200.1857 562391.2258 341310.4542
BXD75 m 447228.12 56200.1857 557768.5058 336687.7342
BXD77 f 585463.5 88860.2958 760243.1963 410683.8037
BXD77 m 676071.4 88860.2958 850851.0963 501291.7037
BXD8 f 510913.4 56200.1857 621453.7858 400373.0142
BXD8 m 628004.12 56200.1857 738544.5058 517463.7342
BXD80 f 419440.72 56200.1857 529981.1058 308900.3342
BXD80 m 414366.6 56200.1857 524906.9858 303826.2142
BXD81 f 558816.08 56200.1857 669356.4658 448275.6942
BXD81 m 579445.4 56200.1857 689985.7858 468905.0142
BXD84 f 448384.68 56200.1857 558925.0658 337844.2942
BXD84 m 445840.64 56200.1857 556381.0258 335300.2542
BXD85 f 522851.6 88860.2958 697631.2963 348071.9037
BXD85 m 388693.6 88860.2958 563473.2963 213913.9037
BXD86 f 497157.08 56200.1857 607697.4658 386616.6942
BXD86 m 510690.45 62833.7178 634278.3585 387102.5415
BXD87 f 410325.8 56200.1857 520866.1858 299785.4142
BXD87 m 387166.16 56200.1857 497706.5458 276625.7742
BXD89 f 455243.08 56200.1857 565783.4658 344702.6942
BXD89 m 537720.64 56200.1857 648261.0258 427180.2542
BXD90 f 591051.0667 72554.1277 733758.0911 448344.0422
BXD90 m 504479.8667 72554.1277 647186.8911 361772.8422
BXD96 f 580102.8 56200.1857 690643.1858 469562.4142
BXD96 m 432388.36 56200.1857 542928.7458 321847.9742
BXD97 f 498581.12 56200.1857 609121.5058 388040.7342
BXD97 m 414762.5 62833.7178 538350.4085 291174.5915
BXD98 f 469648.0 88860.2958 644427.6963 294868.3037
BXD98 m 500259.35 62833.7178 623847.2585 376671.4415
C57BL/6J f 780184.44 56200.1857 890724.8258 669644.0542
C57BL/6J m 413026.68 56200.1857 523567.0658 302486.2942
DBA/2J f 445903.6 56200.1857 556443.9858 335363.2142
DBA/2J m 461857.52 56200.1857 572397.9058 351317.1342


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 512176.24 39739.5324 590340.0964 434012.3836
BXD101 both 508956.0417 47990.0446 603347.8659 414564.2174
BXD102 both 421858.62 39739.5324 500022.4764 343694.7636
BXD11 both 494698.94 39739.5324 572862.7964 416535.0836
BXD13 both 379165.06 39739.5324 457328.9164 301001.2036
BXD14 both 534765.68 39739.5324 612929.5364 456601.8236
BXD15 both 491192.9 39739.5324 569356.7564 413029.0436
BXD16 both 559992.38 39739.5324 638156.2364 481828.5236
BXD2 both 530944.08 39739.5324 609107.9364 452780.2236
BXD21 both 458708.1867 38047.7056 533544.3817 383871.9917
BXD27 both 422583.18 39739.5324 500747.0364 344419.3236
BXD28 both 425053.62 39739.5324 503217.4764 346889.7636
BXD31 both 395566.79 42150.1393 478472.0794 312661.5006
BXD32 both 479864.02 39739.5324 558027.8764 401700.1636
BXD39 both 432310.62 39739.5324 510474.4764 354146.7636
BXD40 both 461161.72 39739.5324 539325.5764 382997.8636
BXD42 both 482640.26 39739.5324 560804.1164 404476.4036
BXD43 both 502229.06 39739.5324 580392.9164 424065.2036
BXD44 both 470035.48 39739.5324 548199.3364 391871.6236
BXD48 both 527908.42 39739.5324 606072.2764 449744.5636
BXD49 both 459380.43 42150.1393 542285.7194 376475.1406
BXD50 both 375357.86 39739.5324 453521.7164 297194.0036
BXD51 both 436795.52 39739.5324 514959.3764 358631.6636
BXD6 both 467701.045 42150.1393 550606.3344 384795.7556
BXD61 both 393791.36 39739.5324 471955.2164 315627.5036
BXD62 both 399435.58 39739.5324 477599.4364 321271.7236
BXD65 both 418766.8 45887.2595 509022.6471 328510.9529
BXD66 both 518556.2 62833.7178 642144.1085 394968.2915
BXD68 both 491126.55 57359.0743 603946.3589 378306.7411
BXD69 both 417688.685 42150.1393 500593.9744 334783.3956
BXD70 both 440939.86 39739.5324 519103.7164 362776.0036
BXD73 both 562597.6 39739.5324 640761.4564 484433.7436
BXD75 both 449539.48 39739.5324 527703.3364 371375.6236
BXD77 both 630767.45 62833.7178 754355.3585 507179.5415
BXD8 both 569458.76 39739.5324 647622.6164 491294.9036
BXD80 both 416903.66 39739.5324 495067.5164 338739.8036
BXD81 both 569130.74 39739.5324 647294.5964 490966.8836
BXD84 both 447112.66 39739.5324 525276.5164 368948.8036
BXD85 both 455772.6 62833.7178 579360.5085 332184.6915
BXD86 both 503923.765 42150.1393 586829.0544 421018.4756
BXD87 both 398745.98 39739.5324 476909.8364 320582.1236
BXD89 both 496481.86 39739.5324 574645.7164 418318.0036
BXD90 both 547765.4667 51303.5157 648674.5714 446856.3619
BXD96 both 506245.58 39739.5324 584409.4364 428081.7236
BXD97 both 456671.81 42150.1393 539577.0994 373766.5206
BXD98 both 484953.675 54415.5958 591983.9434 377923.4066
C57BL/6J both 596605.56 39739.5324 674769.4164 518441.7036
DBA/2J both 453880.56 39739.5324 532044.4164 375716.7036




  GWAS USING LINEAR MIXED MODELS