Project measure / variable:   Crusio1   pyr_R

ID, description, units MPD:62066   pyr_R   size of stratum pyramidale (arbitrary units)    right  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
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  STRAIN COMPARISON PLOT
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Crusio1 - size of stratum pyramidale (arbitrary units) right



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means230315.0   None 227745.0   None
Median of the strain means222817.0   None 226512.0   None
SD of the strain means± 30674.0 ± 24123.0
Coefficient of variation (CV)0.1332 0.1059
Min–max range of strain means170104.0   –   323652.0   None 166497.0   –   275666.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 273745293.9395 273745293.9395 0.2602 0.6103
strain 47 212426882820.384 4519720911.072 4.2966 < 0.0001
sex:strain 47 55731005650.061 1185766077.6609 1.1272 0.2718
Residuals 343 360815688190.382 1051940781.8962


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 221691.0 0.0   1   0.0 0.0 221690.8, 221690.8 -0.28
BXD1 m 166497.0 0.0   1   0.0 0.0 166496.8, 166496.8 -2.54
BXD100 f 212948.0 23217.0   5 10383.0 0.109 191312.8, 244510.8 -0.57
BXD100 m 226512.0 30139.0   5 13479.0 0.1331 203473.0, 276971.8 -0.05
BXD101 f 247162.0 30005.0   3 17323.0 0.1214 213230.2, 270189.0 0.55
BXD101 m 243241.0 34823.0   4 17411.0 0.1432 198276.6, 279016.4 0.64
BXD102 f 218906.0 33579.0   5 15017.0 0.1534 189261.0, 265939.4 -0.37
BXD102 m 212463.0 30725.0   5 13741.0 0.1446 174702.6, 259599.2 -0.63
BXD11 f 232126.0 62521.0   5 27960.0 0.2693 179071.8, 330584.2 0.06
BXD11 m 216934.0 15180.0   5 6788.0 0.07 196270.0, 237203.6 -0.45
BXD13 f 206133.0 19121.0   5 8551.0 0.0928 186721.4, 235558.2 -0.79
BXD13 m 212784.0 61933.0   5 27697.0 0.2911 141653.6, 307614.8 -0.62
BXD14 f 222074.0 33009.0   5 14762.0 0.1486 188905.0, 276847.2 -0.27
BXD14 m 246547.0 34429.0   5 15397.0 0.1396 213240.8, 291465.4 0.78
BXD15 f 253226.0 14929.0   5 6676.0 0.059 229535.6, 270721.0 0.75
BXD15 m 260424.0 39749.0   5 17776.0 0.1526 200041.8, 305655.8 1.35
BXD16 f 297429.0 29981.0   5 13408.0 0.1008 262907.6, 330453.8 2.19
BXD16 m 259259.0 28708.0   5 12839.0 0.1107 229027.8, 292822.8 1.31
BXD18 f 207145.0 0.0   1   0.0 0.0 207144.6, 207144.6 -0.76
BXD18 m 221914.0 0.0   1   0.0 0.0 221914.4, 221914.4 -0.24
BXD19 f 323652.0 0.0   1   0.0 0.0 323652.2, 323652.2 3.04
BXD19 m 231117.0 0.0   1   0.0 0.0 231117.0, 231117.0 0.14
BXD2 f 241898.0 31638.0   5 14149.0 0.1308 206050.2, 273073.4 0.38
BXD2 m 243341.0 26282.0   5 11754.0 0.108 218304.6, 284185.8 0.65
BXD21 f 281402.0 28606.0   5 12793.0 0.1017 253698.6, 329211.0 1.67
BXD21 m 255606.0 33741.0   6 13775.0 0.132 212582.75, 293844.0 1.15
BXD27 f 207506.0 25362.0   5 11342.0 0.1222 180420.4, 233209.6 -0.74
BXD27 m 203779.0 20857.0   5 9328.0 0.1024 173465.0, 227430.4 -0.99
BXD28 f 208263.0 27592.0   5 12340.0 0.1325 169276.8, 235471.2 -0.72
BXD28 m 228054.0 26266.0   5 11747.0 0.1152 195128.4, 255488.6 0.01
BXD31 f 224884.0 30501.0   5 13640.0 0.1356 190801.8, 273893.4 -0.18
BXD31 m 200742.0 16574.0   4 8287.0 0.0826 183009.2, 223081.6 -1.12
BXD32 f 177707.0 13614.0   5 6089.0 0.0766 154920.0, 191582.0 -1.72
BXD32 m 208497.0 32210.0   5 14405.0 0.1545 164869.4, 247375.8 -0.8
BXD33 m 191743.0 0.0   1   0.0 0.0 191742.6, 191742.6 -1.49
BXD34 f 280236.0 0.0   1   0.0 0.0 280236.0, 280236.0 1.63
BXD34 m 240680.0 0.0   1   0.0 0.0 240680.0, 240680.0 0.54
BXD39 f 213338.0 9459.0   5 4230.0 0.0443 204992.8, 229073.8 -0.55
BXD39 m 229474.0 42044.0   5 18803.0 0.1832 167571.2, 279405.8 0.07
BXD40 f 260066.0 37329.0   5 16694.0 0.1435 218764.8, 310631.4 0.97
BXD40 m 250311.0 24230.0   5 10836.0 0.0968 217694.6, 283845.2 0.94
BXD42 f 256949.0 55538.0   5 24837.0 0.2161 220188.8, 349746.2 0.87
BXD42 m 246330.0 35745.0   5 15986.0 0.1451 213003.0, 293464.8 0.77
BXD43 f 247663.0 32298.0   5 14444.0 0.1304 215408.4, 291478.2 0.57
BXD43 m 226440.0 27348.0   5 12230.0 0.1208 185117.8, 257081.8 -0.05
BXD44 f 210937.0 23900.0   5 10688.0 0.1133 177117.8, 233911.6 -0.63
BXD44 m 255498.0 44931.0   5 20094.0 0.1759 220348.8, 328710.0 1.15
BXD48 f 221147.0 41199.0   5 18425.0 0.1863 175024.4, 265711.6 -0.3
BXD48 m 221503.0 14020.0   5 6270.0 0.0633 207513.2, 235914.6 -0.26
BXD49 f 205903.0 20688.0   4 10344.0 0.1005 184518.6, 231218.0 -0.8
BXD49 m 231822.0 35843.0   5 16029.0 0.1546 207220.2, 291229.6 0.17
BXD50 f 182676.0 31606.0   5 14135.0 0.173 149633.6, 220306.6 -1.55
BXD50 m 188095.0 51043.0   5 22827.0 0.2714 134926.0, 269197.4 -1.64
BXD51 f 219669.0 12863.0   5 5752.0 0.0586 209061.8, 241366.2 -0.35
BXD51 m 210760.0 9693.0   5 4335.0 0.046 199165.2, 219436.2 -0.7
BXD6 f 215877.0 22150.0   5 9906.0 0.1026 193571.4, 250207.0 -0.47
BXD6 m 250877.0 35385.0   4 17692.0 0.141 203926.6, 288830.0 0.96
BXD61 f 214727.0 18864.0   5 8436.0 0.0879 185949.8, 231285.6 -0.51
BXD61 m 222525.0 21749.0   5 9726.0 0.0977 199654.4, 254722.2 -0.22
BXD62 f 209922.0 20120.0   5 8998.0 0.0958 177580.0, 229162.4 -0.66
BXD62 m 219398.0 34943.0   5 15627.0 0.1593 172324.6, 257114.4 -0.35
BXD65 f 207742.0 12075.0   3 6972.0 0.0581 197915.0, 221221.8 -0.74
BXD65 m 206823.0 19332.0   5 8645.0 0.0935 183436.6, 237086.4 -0.87
BXD66 f 214893.0 17787.0   2   12578.0 0.0828 202315.8, 227470.8 -0.5
BXD66 m 209631.0 24971.0   2   17657.0 0.1191 191973.8, 227287.6 -0.75
BXD68 f 231075.0 25253.0   2   17857.0 0.1093 213218.2, 248932.0 0.02
BXD68 m 252356.0 54532.0   3 31484.0 0.2161 194618.8, 302986.6 1.02
BXD69 f 236840.0 17192.0   4 8596.0 0.0726 213969.0, 253742.2 0.21
BXD69 m 247872.0 37034.0   5 16562.0 0.1494 208716.4, 302758.0 0.83
BXD70 f 193665.0 35784.0   5 16003.0 0.1848 153474.2, 232841.2 -1.19
BXD70 m 241831.0 40699.0   5 18201.0 0.1683 193139.8, 295467.8 0.58
BXD71 m 228538.0 0.0   1   0.0 0.0 228538.2, 228538.2 0.03
BXD73 f 222817.0 43081.0   5 19267.0 0.1933 169236.2, 275455.4 -0.24
BXD73 m 233042.0 26807.0   5 11988.0 0.115 196892.2, 268419.0 0.22
BXD75 f 237584.0 32085.0   5 14349.0 0.135 194995.6, 263344.8 0.24
BXD75 m 240209.0 38428.0   5 17186.0 0.16 210972.6, 302985.4 0.52
BXD77 f 276715.0 14368.0   2   10160.0 0.0519 266555.2, 286874.6 1.51
BXD77 m 269124.0 23973.0   2   16951.0 0.0891 252172.6, 286075.2 1.72
BXD8 f 269773.0 29935.0   5 13388.0 0.111 237459.8, 303216.2 1.29
BXD8 m 257057.0 17774.0   5 7949.0 0.0691 237621.4, 279364.4 1.22
BXD80 f 228751.0 8967.0   5 4010.0 0.0392 213100.8, 235282.4 -0.05
BXD80 m 225142.0 10100.0   5 4517.0 0.0449 210276.4, 237385.0 -0.11
BXD81 f 253073.0 36185.0   5 16182.0 0.143 209446.4, 303811.6 0.74
BXD81 m 256536.0 29358.0   5 13129.0 0.1144 229024.0, 291980.0 1.19
BXD84 f 230585.0 31267.0   5 13983.0 0.1356 195988.0, 268397.6 0.01
BXD84 m 215167.0 13824.0   5 6182.0 0.0642 203832.4, 237601.0 -0.52
BXD85 f 207675.0 20054.0   2   14180.0 0.0966 193494.2, 221855.0 -0.74
BXD85 m 184547.0 12002.0   2   8487.0 0.065 176059.6, 193033.6 -1.79
BXD86 f 225342.0 30417.0   5 13603.0 0.135 183685.4, 254916.4 -0.16
BXD86 m 243887.0 22034.0   4 11017.0 0.0903 218842.4, 271958.2 0.67
BXD87 f 170104.0 22951.0   5 10264.0 0.1349 136502.2, 194966.6 -1.96
BXD87 m 178176.0 18878.0   5 8443.0 0.106 152381.2, 204896.4 -2.05
BXD89 f 250006.0 20284.0   5 9071.0 0.0811 215523.6, 267781.4 0.64
BXD89 m 275666.0 34340.0   5 15357.0 0.1246 229993.2, 326102.8 1.99
BXD90 f 201846.0 20648.0   3 11921.0 0.1023 181516.6, 222798.8 -0.93
BXD90 m 200614.0 17592.0   3 10157.0 0.0877 181301.0, 215722.0 -1.12
BXD92 f 269580.0 0.0   1   0.0 0.0 269580.4, 269580.4 1.28
BXD92 m 260374.0 0.0   1   0.0 0.0 260374.2, 260374.2 1.35
BXD96 f 245520.0 23761.0   5 10626.0 0.0968 225812.6, 281005.2 0.5
BXD96 m 215907.0 32866.0   5 14698.0 0.1522 192284.2, 273259.2 -0.49
BXD97 f 257484.0 39932.0   5 17858.0 0.1551 207126.0, 311683.8 0.89
BXD97 m 223943.0 25302.0   4 12651.0 0.113 200552.8, 258183.0 -0.16
BXD98 f 188683.0 17111.0   2   12099.0 0.0907 176584.0, 200782.8 -1.36
BXD98 m 225219.0 27231.0   4 13616.0 0.1209 195784.6, 253973.2 -0.1
C57BL/6J f 260041.0 91373.0   5 40863.0 0.3514 201332.0, 421489.0 0.97
C57BL/6J m 189581.0 22831.0   5 10210.0 0.1204 161586.6, 213716.0 -1.58
DBA/2J f 203615.0 42063.0   5 18811.0 0.2066 136334.6, 235111.8 -0.87
DBA/2J m 221591.0 49081.0   5 21950.0 0.2215 165084.4, 299678.0 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 212948.32 14504.7632 241477.8009 184418.8391
BXD100 m 226512.2 14504.7632 255041.6809 197982.7191
BXD101 f 247162.2667 18725.5688 283993.6681 210330.8652
BXD101 m 243240.6 16216.8183 275137.5293 211343.6707
BXD102 f 218906.24 14504.7632 247435.7209 190376.7591
BXD102 m 212462.72 14504.7632 240992.2009 183933.2391
BXD11 f 232126.4 14504.7632 260655.8809 203596.9191
BXD11 m 216934.32 14504.7632 245463.8009 188404.8391
BXD13 f 206132.56 14504.7632 234662.0409 177603.0791
BXD13 m 212784.2 14504.7632 241313.6809 184254.7191
BXD14 f 222074.0 14504.7632 250603.4809 193544.5191
BXD14 m 246546.84 14504.7632 275076.3209 218017.3591
BXD15 f 253226.36 14504.7632 281755.8409 224696.8791
BXD15 m 260424.48 14504.7632 288953.9609 231894.9991
BXD16 f 297428.72 14504.7632 325958.2009 268899.2391
BXD16 m 259258.6 14504.7632 287788.0809 230729.1191
BXD2 f 241898.24 14504.7632 270427.7209 213368.7591
BXD2 m 243341.08 14504.7632 271870.5609 214811.5991
BXD21 f 281402.2 14504.7632 309931.6809 252872.7191
BXD21 m 255605.725 13240.9767 281649.4587 229561.9913
BXD27 f 207505.72 14504.7632 236035.2009 178976.2391
BXD27 m 203778.52 14504.7632 232308.0009 175249.0391
BXD28 f 208262.72 14504.7632 236792.2009 179733.2391
BXD28 m 228054.12 14504.7632 256583.6009 199524.6391
BXD31 f 224884.44 14504.7632 253413.9209 196354.9591
BXD31 m 200741.95 16216.8183 232638.8793 168845.0207
BXD32 f 177707.36 14504.7632 206236.8409 149177.8791
BXD32 m 208496.68 14504.7632 237026.1609 179967.1991
BXD39 f 213337.52 14504.7632 241867.0009 184808.0391
BXD39 m 229474.0 14504.7632 258003.4809 200944.5191
BXD40 f 260065.56 14504.7632 288595.0409 231536.0791
BXD40 m 250311.2 14504.7632 278840.6809 221781.7191
BXD42 f 256948.59 14504.7632 285478.0709 228419.1091
BXD42 m 246329.8 14504.7632 274859.2809 217800.3191
BXD43 f 247663.28 14504.7632 276192.7609 219133.7991
BXD43 m 226440.2 14504.7632 254969.6809 197910.7191
BXD44 f 210937.2 14504.7632 239466.6809 182407.7191
BXD44 m 255497.56 14504.7632 284027.0409 226968.0791
BXD48 f 221146.68 14504.7632 249676.1609 192617.1991
BXD48 m 221502.64 14504.7632 250032.1209 192973.1591
BXD49 f 205903.2 16216.8183 237800.1293 174006.2707
BXD49 m 231821.76 14504.7632 260351.2409 203292.2791
BXD50 f 182676.08 14504.7632 211205.5609 154146.5991
BXD50 m 188095.2 14504.7632 216624.6809 159565.7191
BXD51 f 219668.76 14504.7632 248198.2409 191139.2791
BXD51 m 210759.84 14504.7632 239289.3209 182230.3591
BXD6 f 215877.04 14504.7632 244406.5209 187347.5591
BXD6 m 250877.05 16216.8183 282773.9793 218980.1207
BXD61 f 214727.28 14504.7632 243256.7609 186197.7991
BXD61 m 222524.56 14504.7632 251054.0409 193995.0791
BXD62 f 209921.6 14504.7632 238451.0809 181392.1191
BXD62 m 219398.32 14504.7632 247927.8009 190868.8391
BXD65 f 207741.8667 18725.5688 244573.2681 170910.4652
BXD65 m 206823.4 14504.7632 235352.8809 178293.9191
BXD66 f 214893.3 22934.0444 260002.3701 169784.2299
BXD66 m 209630.7 22934.0444 254739.7701 164521.6299
BXD68 f 231075.1 22934.0444 276184.1701 185966.0299
BXD68 m 252355.6667 18725.5688 289187.0681 215524.2652
BXD69 f 236840.0 16216.8183 268736.9293 204943.0707
BXD69 m 247871.8 14504.7632 276401.2809 219342.3191
BXD70 f 193664.6 14504.7632 222194.0809 165135.1191
BXD70 m 241831.32 14504.7632 270360.8009 213301.8391
BXD73 f 222817.04 14504.7632 251346.5209 194287.5591
BXD73 m 233041.76 14504.7632 261571.2409 204512.2791
BXD75 f 237583.68 14504.7632 266113.1609 209054.1991
BXD75 m 240208.96 14504.7632 268738.4409 211679.4791
BXD77 f 276714.9 22934.0444 321823.9701 231605.8299
BXD77 m 269123.9 22934.0444 314232.9701 224014.8299
BXD8 f 269772.6 14504.7632 298302.0809 241243.1191
BXD8 m 257056.64 14504.7632 285586.1209 228527.1591
BXD80 f 228751.08 14504.7632 257280.5609 200221.5991
BXD80 m 225142.36 14504.7632 253671.8409 196612.8791
BXD81 f 253073.04 14504.7632 281602.5209 224543.5591
BXD81 m 256536.0 14504.7632 285065.4809 228006.5191
BXD84 f 230584.88 14504.7632 259114.3609 202055.3991
BXD84 m 215167.04 14504.7632 243696.5209 186637.5591
BXD85 f 207674.6 22934.0444 252783.6701 162565.5299
BXD85 m 184546.6 22934.0444 229655.6701 139437.5299
BXD86 f 225341.8 14504.7632 253871.2809 196812.3191
BXD86 m 243887.45 16216.8183 275784.3793 211990.5207
BXD87 f 170103.92 14504.7632 198633.4009 141574.4391
BXD87 m 178176.28 14504.7632 206705.7609 149646.7991
BXD89 f 250005.96 14504.7632 278535.4409 221476.4791
BXD89 m 275666.48 14504.7632 304195.9609 247136.9991
BXD90 f 201845.5333 18725.5688 238676.9348 165014.1319
BXD90 m 200614.2667 18725.5688 237445.6681 163782.8652
BXD96 f 245520.44 14504.7632 274049.9209 216990.9591
BXD96 m 215907.36 14504.7632 244436.8409 187377.8791
BXD97 f 257484.16 14504.7632 286013.6409 228954.6791
BXD97 m 223943.4 16216.8183 255840.3293 192046.4707
BXD98 f 188683.4 22934.0444 233792.4701 143574.3299
BXD98 m 225219.3 16216.8183 257116.2293 193322.3707
C57BL/6J f 260040.76 14504.7632 288570.2409 231511.2791
C57BL/6J m 189581.32 14504.7632 218110.8009 161051.8391
DBA/2J f 203615.04 14504.7632 232144.5209 175085.5591
DBA/2J m 221591.36 14504.7632 250120.8409 193061.8791


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 219730.26 10256.4164 239903.6494 199556.8706
BXD101 both 245201.4333 12385.7996 269563.1155 220839.7512
BXD102 both 215684.48 10256.4164 235857.8694 195511.0906
BXD11 both 224530.36 10256.4164 244703.7494 204356.9706
BXD13 both 209458.38 10256.4164 229631.7694 189284.9906
BXD14 both 234310.42 10256.4164 254483.8094 214137.0306
BXD15 both 256825.42 10256.4164 276998.8094 236652.0306
BXD16 both 278343.66 10256.4164 298517.0494 258170.2706
BXD2 both 242619.66 10256.4164 262793.0494 222446.2706
BXD21 both 268503.9625 9819.7711 287818.5124 249189.4126
BXD27 both 205642.12 10256.4164 225815.5094 185468.7306
BXD28 both 218158.42 10256.4164 238331.8094 197985.0306
BXD31 both 212813.195 10878.5724 234210.3057 191416.0843
BXD32 both 193102.02 10256.4164 213275.4094 172928.6306
BXD39 both 221405.76 10256.4164 241579.1494 201232.3706
BXD40 both 255188.38 10256.4164 275361.7694 235014.9906
BXD42 both 251639.195 10256.4164 271812.5844 231465.8056
BXD43 both 237051.74 10256.4164 257225.1294 216878.3506
BXD44 both 233217.38 10256.4164 253390.7694 213043.9906
BXD48 both 221324.66 10256.4164 241498.0494 201151.2706
BXD49 both 218862.48 10878.5724 240259.5907 197465.3693
BXD50 both 185385.64 10256.4164 205559.0294 165212.2506
BXD51 both 215214.3 10256.4164 235387.6894 195040.9106
BXD6 both 233377.045 10878.5724 254774.1557 211979.9343
BXD61 both 218625.92 10256.4164 238799.3094 198452.5306
BXD62 both 214659.96 10256.4164 234833.3494 194486.5706
BXD65 both 207282.6333 11843.0896 230576.8569 183988.4097
BXD66 both 212262.0 16216.8183 244158.9293 180365.0707
BXD68 both 241715.3833 14803.862 270833.1628 212597.6038
BXD69 both 242355.9 10878.5724 263753.0107 220958.7893
BXD70 both 217747.96 10256.4164 237921.3494 197574.5706
BXD73 both 227929.4 10256.4164 248102.7894 207756.0106
BXD75 both 238896.32 10256.4164 259069.7094 218722.9306
BXD77 both 272919.4 16216.8183 304816.3293 241022.4707
BXD8 both 263414.62 10256.4164 283588.0094 243241.2306
BXD80 both 226946.72 10256.4164 247120.1094 206773.3306
BXD81 both 254804.52 10256.4164 274977.9094 234631.1306
BXD84 both 222875.96 10256.4164 243049.3494 202702.5706
BXD85 both 196110.6 16216.8183 228007.5293 164213.6707
BXD86 both 234614.625 10878.5724 256011.7357 213217.5143
BXD87 both 174140.1 10256.4164 194313.4894 153966.7106
BXD89 both 262836.22 10256.4164 283009.6094 242662.8306
BXD90 both 201229.9 13240.9767 227273.6337 175186.1663
BXD96 both 230713.9 10256.4164 250887.2894 210540.5106
BXD97 both 240713.78 10878.5724 262110.8907 219316.6693
BXD98 both 206951.35 14044.1766 234574.9011 179327.7989
C57BL/6J both 224811.04 10256.4164 244984.4294 204637.6506
DBA/2J both 212603.2 10256.4164 232776.5894 192429.8106




  GWAS USING LINEAR MIXED MODELS