Project measure / variable:   Crusio1   supra_R

ID, description, units MPD:62061   supra_R   size of suprapyramidal mossy fibers (arbitrary units)    right  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
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  STRAIN COMPARISON PLOT
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Crusio1 - size of suprapyramidal mossy fibers (arbitrary units) right



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means166812.0   None 164541.0   None
Median of the strain means165363.0   None 162451.0   None
SD of the strain means± 31408.0 ± 22409.0
Coefficient of variation (CV)0.1883 0.1362
Min–max range of strain means105155.0   –   318331.0   None 122298.0   –   221025.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 234155339.1089 234155339.1089 0.3622 0.5477
strain 47 160823292818.399 3421772187.6255 5.2936 < 0.0001
sex:strain 47 32444526534.5656 690309075.2035 1.0679 0.3608
Residuals 343 221715408607.943 646400608.1864


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 182790.0 0.0   1   0.0 0.0 182789.8, 182789.8 0.51
BXD1 m 154149.0 0.0   1   0.0 0.0 154148.8, 154148.8 -0.46
BXD100 f 143255.0 11164.0   5 4993.0 0.0779 131474.8, 160599.8 -0.75
BXD100 m 154487.0 19941.0   5 8918.0 0.1291 128690.4, 184160.6 -0.45
BXD101 f 170545.0 24455.0   3 14119.0 0.1434 152266.4, 198324.4 0.12
BXD101 m 172155.0 11030.0   4 5515.0 0.0641 156476.0, 180712.8 0.34
BXD102 f 141371.0 41999.0   5 18783.0 0.2971 103675.8, 209897.4 -0.81
BXD102 m 131678.0 9561.0   5 4276.0 0.0726 118724.4, 144120.6 -1.47
BXD11 f 166956.0 36830.0   5 16471.0 0.2206 126316.4, 203742.8 0.0
BXD11 m 157719.0 34437.0   5 15401.0 0.2183 118992.6, 203305.8 -0.3
BXD13 f 167728.0 15420.0   5 6896.0 0.0919 153200.8, 189632.0 0.03
BXD13 m 166386.0 21499.0   5 9614.0 0.1292 138763.8, 188704.0 0.08
BXD14 f 196171.0 15952.0   5 7134.0 0.0813 183309.4, 223896.2 0.93
BXD14 m 198328.0 23501.0   5 10510.0 0.1185 168007.0, 223866.2 1.51
BXD15 f 187170.0 30211.0   5 13511.0 0.1614 161178.6, 238983.2 0.65
BXD15 m 189794.0 37884.0   5 16942.0 0.1996 135955.0, 226154.8 1.13
BXD16 f 191397.0 43153.0   5 19299.0 0.2255 141656.6, 232666.2 0.78
BXD16 m 162748.0 20507.0   5 9171.0 0.126 144378.2, 196444.6 -0.08
BXD18 f 105155.0 0.0   1   0.0 0.0 105155.2, 105155.2 -1.96
BXD18 m 122298.0 0.0   1   0.0 0.0 122297.8, 122297.8 -1.89
BXD19 f 318331.0 0.0   1   0.0 0.0 318331.2, 318331.2 4.82
BXD19 m 198628.0 0.0   1   0.0 0.0 198628.0, 198628.0 1.52
BXD2 f 163288.0 18011.0   5 8055.0 0.1103 142079.2, 186231.4 -0.11
BXD2 m 170239.0 20330.0   5 9092.0 0.1194 150170.0, 202583.4 0.25
BXD21 f 206358.0 21049.0   5 9413.0 0.102 189860.0, 241638.4 1.26
BXD21 m 174165.0 28199.0   6 11512.0 0.1619 138740.6, 201173.8 0.43
BXD27 f 120112.0 19001.0   5 8498.0 0.1582 92502.8, 145472.2 -1.49
BXD27 m 132618.0 10833.0   5 4845.0 0.0817 115891.6, 141988.2 -1.42
BXD28 f 143649.0 20590.0   5 9208.0 0.1433 125531.4, 176909.0 -0.74
BXD28 m 146184.0 21621.0   5 9669.0 0.1479 120452.0, 179562.2 -0.82
BXD31 f 158805.0 23043.0   5 10305.0 0.1451 121865.6, 180188.6 -0.25
BXD31 m 157554.0 18752.0   4 9376.0 0.119 135640.0, 180769.8 -0.31
BXD32 f 149113.0 17019.0   5 7611.0 0.1141 130192.0, 170834.6 -0.56
BXD32 m 173660.0 40909.0   5 18295.0 0.2356 133389.2, 233929.0 0.41
BXD33 m 132593.0 0.0   1   0.0 0.0 132592.8, 132592.8 -1.43
BXD34 f 186988.0 0.0   1   0.0 0.0 186988.0, 186988.0 0.64
BXD34 m 150949.0 0.0   1   0.0 0.0 150949.0, 150949.0 -0.61
BXD39 f 170378.0 21974.0   5 9827.0 0.129 140235.6, 197503.8 0.11
BXD39 m 161313.0 22486.0   5 10056.0 0.1394 131087.0, 181230.2 -0.14
BXD40 f 198649.0 8173.0   5 3655.0 0.0411 190194.2, 209698.2 1.01
BXD40 m 200475.0 11295.0   5 5051.0 0.0563 190014.6, 218259.8 1.6
BXD42 f 175132.0 19711.0   5 8815.0 0.1125 151808.4, 195076.4 0.26
BXD42 m 168076.0 7384.0   5 3302.0 0.0439 157033.6, 177371.6 0.16
BXD43 f 156538.0 29802.0   5 13328.0 0.1904 132048.4, 205806.0 -0.33
BXD43 m 146348.0 18067.0   5 8080.0 0.1235 121755.4, 167642.8 -0.81
BXD44 f 156557.0 10521.0   5 4705.0 0.0672 141970.6, 167749.2 -0.33
BXD44 m 192158.0 38344.0   5 17148.0 0.1995 157507.2, 241910.6 1.23
BXD48 f 165363.0 22147.0   5 9904.0 0.1339 143558.0, 190672.8 -0.05
BXD48 m 160748.0 21833.0   5 9764.0 0.1358 140690.2, 193611.6 -0.17
BXD49 f 155033.0 27669.0   4 13835.0 0.1785 139191.8, 196478.8 -0.38
BXD49 m 161658.0 37721.0   5 16869.0 0.2333 118951.2, 218648.6 -0.13
BXD50 f 130556.0 10207.0   5 4565.0 0.0782 121413.4, 146715.8 -1.15
BXD50 m 144229.0 29259.0   5 13085.0 0.2029 111513.8, 185522.2 -0.91
BXD51 f 124952.0 20394.0   5 9120.0 0.1632 101718.6, 155394.4 -1.33
BXD51 m 137630.0 11089.0   5 4959.0 0.0806 120625.6, 151386.6 -1.2
BXD6 f 163721.0 10805.0   5 4832.0 0.066 146673.8, 175650.6 -0.1
BXD6 m 208455.0 35307.0   4 17654.0 0.1694 186088.0, 260989.8 1.96
BXD61 f 152215.0 9993.0   5 4469.0 0.0657 138242.6, 161989.0 -0.46
BXD61 m 169017.0 21742.0   5 9723.0 0.1286 145829.4, 196471.2 0.2
BXD62 f 147435.0 15052.0   5 6731.0 0.1021 133798.6, 171448.4 -0.62
BXD62 m 146512.0 11581.0   5 5179.0 0.079 137244.2, 165017.4 -0.8
BXD65 f 140188.0 4298.0   3 2481.0 0.0307 137657.4, 145150.0 -0.85
BXD65 m 144225.0 14128.0   5 6318.0 0.098 129285.6, 158692.4 -0.91
BXD66 f 174072.0 11422.0   2   8077.0 0.0656 165995.4, 182149.0 0.23
BXD66 m 149319.0 5939.0   2   4200.0 0.0398 145119.2, 153518.4 -0.68
BXD68 f 167853.0 490.7   2   347.0 0.0029 167506.4, 168200.4 0.03
BXD68 m 179987.0 20523.0   3 11849.0 0.114 159188.4, 200223.4 0.69
BXD69 f 142124.0 14389.0   4 7195.0 0.1012 125664.0, 159324.2 -0.79
BXD69 m 159803.0 32875.0   5 14702.0 0.2057 114347.6, 201470.0 -0.21
BXD70 f 136672.0 26959.0   5 12056.0 0.1973 106208.0, 175371.0 -0.96
BXD70 m 166442.0 25852.0   5 11561.0 0.1553 125778.4, 191570.4 0.08
BXD71 m 176107.0 0.0   1   0.0 0.0 176106.8, 176106.8 0.52
BXD73 f 148551.0 11112.0   5 4969.0 0.0748 133194.8, 160392.6 -0.58
BXD73 m 170531.0 33271.0   5 14879.0 0.1951 132396.0, 216633.2 0.27
BXD75 f 179998.0 28595.0   5 12788.0 0.1589 157634.8, 230007.0 0.42
BXD75 m 185259.0 50483.0   5 22577.0 0.2725 147935.0, 273656.2 0.92
BXD77 f 204649.0 61867.0   2   43746.0 0.3023 160902.8, 248395.4 1.2
BXD77 m 221025.0 63063.0   2   44592.0 0.2853 176433.0, 265617.8 2.52
BXD8 f 201734.0 19217.0   5 8594.0 0.0953 177279.8, 227990.0 1.11
BXD8 m 185174.0 31466.0   5 14072.0 0.1699 145303.8, 225803.0 0.92
BXD80 f 147917.0 18007.0   5 8053.0 0.1217 127677.2, 176024.2 -0.6
BXD80 m 136223.0 7481.0   5 3346.0 0.0549 126847.6, 146146.0 -1.26
BXD81 f 196230.0 31142.0   5 13927.0 0.1587 150477.4, 233406.0 0.94
BXD81 m 174731.0 23891.0   5 10684.0 0.1367 151231.8, 210237.6 0.45
BXD84 f 171961.0 25626.0   5 11460.0 0.149 151827.8, 216118.6 0.16
BXD84 m 172033.0 15318.0   5 6851.0 0.089 155899.2, 192460.8 0.33
BXD85 f 169302.0 8036.0   2   5682.0 0.0475 163620.0, 174985.0 0.08
BXD85 m 138567.0 15672.0   2   11082.0 0.1131 127485.6, 149648.8 -1.16
BXD86 f 178701.0 33209.0   5 14851.0 0.1858 143951.2, 225741.0 0.38
BXD86 m 207828.0 24676.0   4 12338.0 0.1187 186179.4, 234054.0 1.93
BXD87 f 122402.0 14977.0   5 6698.0 0.1224 102419.0, 143651.2 -1.41
BXD87 m 125609.0 13890.0   5 6212.0 0.1106 114630.8, 149566.2 -1.74
BXD89 f 154304.0 29376.0   5 13137.0 0.1904 125961.2, 204185.6 -0.4
BXD89 m 162451.0 12424.0   5 5556.0 0.0765 151029.6, 181530.2 -0.09
BXD90 f 177735.0 24805.0   3 14321.0 0.1396 154571.4, 203906.8 0.35
BXD90 m 170367.0 29183.0   3 16849.0 0.1713 138259.0, 195279.2 0.26
BXD92 f 205103.0 0.0   1   0.0 0.0 205103.2, 205103.2 1.22
BXD92 m 194891.0 0.0   1   0.0 0.0 194891.2, 194891.2 1.35
BXD96 f 169371.0 29538.0   5 13210.0 0.1744 134532.4, 199846.0 0.08
BXD96 m 139751.0 19879.0   5 8890.0 0.1422 122545.4, 174165.6 -1.11
BXD97 f 159749.0 39289.0   5 17571.0 0.2459 108804.6, 209421.8 -0.22
BXD97 m 157723.0 17490.0   4 8745.0 0.1109 136602.8, 174478.2 -0.3
BXD98 f 155662.0 8681.0   2   6138.0 0.0558 149523.8, 161800.8 -0.36
BXD98 m 180731.0 44402.0   4 22201.0 0.2457 128628.0, 233310.6 0.72
C57BL/6J f 159704.0 34137.0   5 15266.0 0.2137 132940.6, 219001.6 -0.23
C57BL/6J m 147807.0 23676.0   5 10588.0 0.1602 106184.2, 164677.2 -0.75
DBA/2J f 181342.0 49165.0   5 21987.0 0.2711 96577.8, 217187.4 0.46
DBA/2J m 160195.0 22610.0   5 10111.0 0.1411 133522.2, 195442.8 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 143254.96 11370.1417 165618.9403 120890.9797
BXD100 m 154487.48 11370.1417 176851.4603 132123.4997
BXD101 f 170545.2667 14678.7898 199417.0411 141673.4922
BXD101 m 172155.2 12712.2048 197158.8901 147151.5099
BXD102 f 141371.16 11370.1417 163735.1403 119007.1797
BXD102 m 131678.48 11370.1417 154042.4603 109314.4997
BXD11 f 166955.56 11370.1417 189319.5403 144591.5797
BXD11 m 157719.36 11370.1417 180083.3403 135355.3797
BXD13 f 167728.12 11370.1417 190092.1003 145364.1397
BXD13 m 166385.84 11370.1417 188749.8203 144021.8597
BXD14 f 196171.28 11370.1417 218535.2603 173807.2997
BXD14 m 198327.72 11370.1417 220691.7003 175963.7397
BXD15 f 187170.32 11370.1417 209534.3003 164806.3397
BXD15 m 189793.84 11370.1417 212157.8203 167429.8597
BXD16 f 191397.04 11370.1417 213761.0203 169033.0597
BXD16 m 162747.56 11370.1417 185111.5403 140383.5797
BXD2 f 163288.2 11370.1417 185652.1803 140924.2197
BXD2 m 170238.56 11370.1417 192602.5403 147874.5797
BXD21 f 206357.64 11370.1417 228721.6203 183993.6597
BXD21 m 174164.7333 10379.4718 194580.1608 153749.3058
BXD27 f 120112.44 11370.1417 142476.4203 97748.4597
BXD27 m 132618.32 11370.1417 154982.3003 110254.3397
BXD28 f 143649.08 11370.1417 166013.0603 121285.0997
BXD28 m 146183.72 11370.1417 168547.7003 123819.7397
BXD31 f 158804.72 11370.1417 181168.7003 136440.7397
BXD31 m 157553.7 12712.2048 182557.3901 132550.0099
BXD32 f 149113.16 11370.1417 171477.1403 126749.1797
BXD32 m 173660.36 11370.1417 196024.3403 151296.3797
BXD39 f 170378.28 11370.1417 192742.2603 148014.2997
BXD39 m 161312.6 11370.1417 183676.5803 138948.6197
BXD40 f 198648.88 11370.1417 221012.8603 176284.8997
BXD40 m 200475.24 11370.1417 222839.2203 178111.2597
BXD42 f 175131.52 11370.1417 197495.5003 152767.5397
BXD42 m 168075.6 11370.1417 190439.5803 145711.6197
BXD43 f 156537.76 11370.1417 178901.7403 134173.7797
BXD43 m 146347.96 11370.1417 168711.9403 123983.9797
BXD44 f 156557.04 11370.1417 178921.0203 134193.0597
BXD44 m 192157.68 11370.1417 214521.6603 169793.6997
BXD48 f 165363.04 11370.1417 187727.0203 142999.0597
BXD48 m 160747.64 11370.1417 183111.6203 138383.6597
BXD49 f 155033.25 12712.2048 180036.9401 130029.5599
BXD49 m 161658.36 11370.1417 184022.3403 139294.3797
BXD50 f 130556.12 11370.1417 152920.1003 108192.1397
BXD50 m 144229.48 11370.1417 166593.4603 121865.4997
BXD51 f 124951.68 11370.1417 147315.6603 102587.6997
BXD51 m 137629.64 11370.1417 159993.6203 115265.6597
BXD6 f 163721.2 11370.1417 186085.1803 141357.2197
BXD6 m 208454.75 12712.2048 233458.4401 183451.0599
BXD61 f 152214.76 11370.1417 174578.7403 129850.7797
BXD61 m 169016.8 11370.1417 191380.7803 146652.8197
BXD62 f 147435.44 11370.1417 169799.4203 125071.4597
BXD62 m 146512.04 11370.1417 168876.0203 124148.0597
BXD65 f 140187.7333 14678.7898 169059.5078 111315.9589
BXD65 m 144225.04 11370.1417 166589.0203 121861.0597
BXD66 f 174072.2 17977.7725 209432.7577 138711.6423
BXD66 m 149318.8 17977.7725 184679.3577 113958.2423
BXD68 f 167853.4 17977.7725 203213.9577 132492.8423
BXD68 m 179987.4667 14678.7898 208859.2411 151115.6922
BXD69 f 142124.25 12712.2048 167127.9401 117120.5599
BXD69 m 159803.48 11370.1417 182167.4603 137439.4997
BXD70 f 136671.88 11370.1417 159035.8603 114307.8997
BXD70 m 166441.68 11370.1417 188805.6603 144077.6997
BXD73 f 148551.0 11370.1417 170914.9803 126187.0197
BXD73 m 170530.88 11370.1417 192894.8603 148166.8997
BXD75 f 179998.48 11370.1417 202362.4603 157634.4997
BXD75 m 185259.4 11370.1417 207623.3803 162895.4197
BXD77 f 204649.1 17977.7725 240009.6577 169288.5423
BXD77 m 221025.4 17977.7725 256385.9577 185664.8423
BXD8 f 201734.0 11370.1417 224097.9803 179370.0197
BXD8 m 185174.0 11370.1417 207537.9803 162810.0197
BXD80 f 147916.8 11370.1417 170280.7803 125552.8197
BXD80 m 136223.28 11370.1417 158587.2603 113859.2997
BXD81 f 196229.8 11370.1417 218593.7803 173865.8197
BXD81 m 174731.44 11370.1417 197095.4203 152367.4597
BXD84 f 171960.64 11370.1417 194324.6203 149596.6597
BXD84 m 172032.88 11370.1417 194396.8603 149668.8997
BXD85 f 169302.5 17977.7725 204663.0577 133941.9423
BXD85 m 138567.2 17977.7725 173927.7577 103206.6423
BXD86 f 178701.48 11370.1417 201065.4603 156337.4997
BXD86 m 207828.0 12712.2048 232831.6901 182824.3099
BXD87 f 122401.64 11370.1417 144765.6203 100037.6597
BXD87 m 125609.04 11370.1417 147973.0203 103245.0597
BXD89 f 154303.96 11370.1417 176667.9403 131939.9797
BXD89 m 162450.84 11370.1417 184814.8203 140086.8597
BXD90 f 177735.0667 14678.7898 206606.8411 148863.2922
BXD90 m 170367.0667 14678.7898 199238.8411 141495.2922
BXD96 f 169370.68 11370.1417 191734.6603 147006.6997
BXD96 m 139751.44 11370.1417 162115.4203 117387.4597
BXD97 f 159749.0 11370.1417 182112.9803 137385.0197
BXD97 m 157722.8 12712.2048 182726.4901 132719.1099
BXD98 f 155662.3 17977.7725 191022.8577 120301.7423
BXD98 m 180731.45 12712.2048 205735.1401 155727.7599
C57BL/6J f 159704.4 11370.1417 182068.3803 137340.4197
C57BL/6J m 147807.24 11370.1417 170171.2203 125443.2597
DBA/2J f 181342.0 11370.1417 203705.9803 158978.0197
DBA/2J m 160195.16 11370.1417 182559.1403 137831.1797


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 148871.22 8039.9043 164684.9421 133057.4979
BXD101 both 171350.2333 9709.1068 190447.1171 152253.3495
BXD102 both 136524.82 8039.9043 152338.5421 120711.0979
BXD11 both 162337.46 8039.9043 178151.1821 146523.7379
BXD13 both 167056.98 8039.9043 182870.7021 151243.2579
BXD14 both 197249.5 8039.9043 213063.2221 181435.7779
BXD15 both 188482.08 8039.9043 204295.8021 172668.3579
BXD16 both 177072.3 8039.9043 192886.0221 161258.5779
BXD2 both 166763.38 8039.9043 182577.1021 150949.6579
BXD21 both 190261.1867 7697.6223 205401.6729 175120.7004
BXD27 both 126365.38 8039.9043 142179.1021 110551.6579
BXD28 both 144916.4 8039.9043 160730.1221 129102.6779
BXD31 both 158179.21 8527.6063 174952.1953 141406.2247
BXD32 both 161386.76 8039.9043 177200.4821 145573.0379
BXD39 both 165845.44 8039.9043 181659.1621 150031.7179
BXD40 both 199562.06 8039.9043 215375.7821 183748.3379
BXD42 both 171603.56 8039.9043 187417.2821 155789.8379
BXD43 both 151442.86 8039.9043 167256.5821 135629.1379
BXD44 both 174357.36 8039.9043 190171.0821 158543.6379
BXD48 both 163055.34 8039.9043 178869.0621 147241.6179
BXD49 both 158345.805 8527.6063 175118.7903 141572.8197
BXD50 both 137392.8 8039.9043 153206.5221 121579.0779
BXD51 both 131290.66 8039.9043 147104.3821 115476.9379
BXD6 both 186087.975 8527.6063 202860.9603 169314.9897
BXD61 both 160615.78 8039.9043 176429.5021 144802.0579
BXD62 both 146973.74 8039.9043 162787.4621 131160.0179
BXD65 both 142206.3867 9283.6818 160466.5001 123946.2732
BXD66 both 161695.5 12712.2048 186699.1901 136691.8099
BXD68 both 173920.4333 11604.6022 196745.5752 151095.2915
BXD69 both 150963.865 8527.6063 167736.8503 134190.8797
BXD70 both 151556.78 8039.9043 167370.5021 135743.0579
BXD73 both 159540.94 8039.9043 175354.6621 143727.2179
BXD75 both 182628.94 8039.9043 198442.6621 166815.2179
BXD77 both 212837.25 12712.2048 237840.9401 187833.5599
BXD8 both 193454.0 8039.9043 209267.7221 177640.2779
BXD80 both 142070.04 8039.9043 157883.7621 126256.3179
BXD81 both 185480.62 8039.9043 201294.3421 169666.8979
BXD84 both 171996.76 8039.9043 187810.4821 156183.0379
BXD85 both 153934.85 12712.2048 178938.5401 128931.1599
BXD86 both 193264.74 8527.6063 210037.7253 176491.7547
BXD87 both 124005.34 8039.9043 139819.0621 108191.6179
BXD89 both 158377.4 8039.9043 174191.1221 142563.6779
BXD90 both 174051.0667 10379.4718 194466.4942 153635.6392
BXD96 both 154561.06 8039.9043 170374.7821 138747.3379
BXD97 both 158735.9 8527.6063 175508.8853 141962.9147
BXD98 both 168196.875 11009.0923 189850.7058 146543.0442
C57BL/6J both 153755.82 8039.9043 169569.5421 137942.0979
DBA/2J both 170768.58 8039.9043 186582.3021 154954.8579




  GWAS USING LINEAR MIXED MODELS