Project measure / variable:   Crusio1   supra_L

ID, description, units MPD:62060   supra_L   size of suprapyramidal mossy fibers (arbitrary units)    left  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
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  STRAIN COMPARISON PLOT
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Crusio1 - size of suprapyramidal mossy fibers (arbitrary units) left



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means172362.0   None 168120.0   None
Median of the strain means165932.0   None 169321.0   None
SD of the strain means± 30712.0 ± 24653.0
Coefficient of variation (CV)0.1782 0.1466
Min–max range of strain means124385.0   –   308899.0   None 119620.0   –   253364.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 21059627.724 21059627.724 0.0152 0.902
strain 47 181035754861.76 3851824571.5268 2.7781 < 0.0001
sex:strain 47 57749896744.8158 1228721207.3365 0.8862 0.6858
Residuals 343 475576213771.14 1386519573.6768


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 195271.0 0.0   1   0.0 0.0 195271.2, 195271.2 0.75
BXD1 m 193557.0 0.0   1   0.0 0.0 193557.4, 193557.4 1.03
BXD100 f 146258.0 23347.0   5 10441.0 0.1596 117051.4, 176836.2 -0.85
BXD100 m 151428.0 27105.0   5 12122.0 0.179 126835.2, 182296.0 -0.68
BXD101 f 176116.0 16951.0   3 9787.0 0.0962 156651.4, 187631.8 0.12
BXD101 m 171636.0 6987.0   4 3494.0 0.0407 164801.6, 181405.8 0.14
BXD102 f 147308.0 29375.0   5 13137.0 0.1994 108593.4, 190112.4 -0.82
BXD102 m 132683.0 21456.0   5 9596.0 0.1617 104143.2, 152864.0 -1.44
BXD11 f 183294.0 38205.0   5 17086.0 0.2084 149633.8, 249086.4 0.36
BXD11 m 150506.0 29864.0   5 13355.0 0.1984 119532.6, 180420.4 -0.71
BXD13 f 177329.0 16000.0   5 7155.0 0.0902 154888.2, 196274.4 0.16
BXD13 m 163291.0 24635.0   5 11017.0 0.1509 143242.0, 190956.6 -0.2
BXD14 f 190754.0 27369.0   5 12240.0 0.1435 164848.0, 225794.8 0.6
BXD14 m 253364.0 123229.0   5 55110.0 0.4864 183534.0, 472232.4 3.46
BXD15 f 184972.0 20645.0   5 9233.0 0.1116 159600.0, 207898.6 0.41
BXD15 m 194233.0 17780.0   5 7951.0 0.0915 178038.4, 214437.8 1.06
BXD16 f 181736.0 32218.0   5 14408.0 0.1773 153262.4, 235719.0 0.31
BXD16 m 175697.0 48878.0   5 21859.0 0.2782 118890.4, 245355.8 0.31
BXD18 f 127125.0 0.0   1   0.0 0.0 127125.2, 127125.2 -1.47
BXD18 m 119620.0 0.0   1   0.0 0.0 119619.6, 119619.6 -1.97
BXD19 f 308899.0 0.0   1   0.0 0.0 308899.4, 308899.4 4.45
BXD19 m 190282.0 0.0   1   0.0 0.0 190282.2, 190282.2 0.9
BXD2 f 161809.0 28107.0   5 12570.0 0.1737 137183.0, 206735.6 -0.34
BXD2 m 182040.0 39535.0   5 17681.0 0.2172 153074.0, 250698.6 0.56
BXD21 f 190869.0 14382.0   5 6432.0 0.0753 175788.8, 209004.6 0.6
BXD21 m 162280.0 20482.0   6 8362.0 0.1262 132294.8, 192218.0 -0.24
BXD27 f 138278.0 12040.0   5 5384.0 0.0871 127378.8, 151728.2 -1.11
BXD27 m 167208.0 18821.0   5 8417.0 0.1126 144133.0, 187438.6 -0.04
BXD28 f 156431.0 22800.0   5 10197.0 0.1458 132490.0, 194090.8 -0.52
BXD28 m 150790.0 16770.0   5 7500.0 0.1112 129849.6, 175052.8 -0.7
BXD31 f 159039.0 30182.0   5 13498.0 0.1898 120572.2, 190462.8 -0.43
BXD31 m 163246.0 27000.0   4 13500.0 0.1654 142948.6, 202995.0 -0.2
BXD32 f 155714.0 13815.0   5 6178.0 0.0887 136571.0, 167454.4 -0.54
BXD32 m 181859.0 33203.0   5 14849.0 0.1826 153823.8, 230502.6 0.56
BXD33 m 202293.0 0.0   1   0.0 0.0 202293.0, 202293.0 1.39
BXD34 f 203112.0 0.0   1   0.0 0.0 203111.6, 203111.6 1.0
BXD34 m 181852.0 0.0   1   0.0 0.0 181852.4, 181852.4 0.56
BXD39 f 161607.0 15506.0   5 6934.0 0.0959 142636.8, 184500.4 -0.35
BXD39 m 175038.0 20184.0   5 9027.0 0.1153 146451.0, 202677.6 0.28
BXD40 f 206771.0 22972.0   5 10274.0 0.1111 177856.6, 229484.4 1.12
BXD40 m 208308.0 21773.0   5 9737.0 0.1045 181761.4, 237563.4 1.63
BXD42 f 179955.0 18410.0   5 8233.0 0.1023 165598.8, 210746.6 0.25
BXD42 m 170550.0 43573.0   5 19487.0 0.2555 128186.6, 241020.6 0.1
BXD43 f 153482.0 15882.0   5 7102.0 0.1035 136432.4, 172067.4 -0.61
BXD43 m 148708.0 23278.0   5 10410.0 0.1565 114491.8, 174377.6 -0.79
BXD44 f 149031.0 16884.0   5 7551.0 0.1133 132220.8, 176221.6 -0.76
BXD44 m 174072.0 8079.0   5 3613.0 0.0464 163132.2, 185080.8 0.24
BXD48 f 168069.0 14992.0   5 6705.0 0.0892 142992.6, 180429.0 -0.14
BXD48 m 159951.0 22377.0   5 10007.0 0.1399 125627.0, 179727.6 -0.33
BXD49 f 165932.0 24392.0   4 12196.0 0.147 145888.6, 201254.8 -0.21
BXD49 m 171077.0 37199.0   5 16636.0 0.2174 140195.0, 230688.4 0.12
BXD50 f 124385.0 9357.0   5 4184.0 0.0752 112160.2, 136386.8 -1.56
BXD50 m 138330.0 20974.0   5 9380.0 0.1516 112222.8, 162195.8 -1.21
BXD51 f 126204.0 12069.0   5 5398.0 0.0956 109753.6, 142746.8 -1.5
BXD51 m 137911.0 19661.0   5 8793.0 0.1426 118107.2, 163066.0 -1.23
BXD6 f 174488.0 33710.0   5 15076.0 0.1932 125800.4, 218161.6 0.07
BXD6 m 200873.0 18005.0   4 9003.0 0.0896 181898.2, 217731.8 1.33
BXD61 f 149654.0 10302.0   5 4607.0 0.0688 138283.0, 166454.4 -0.74
BXD61 m 169321.0 20386.0   5 9117.0 0.1204 145574.4, 199697.8 0.05
BXD62 f 147948.0 6184.0   5 2766.0 0.0418 139946.4, 154772.6 -0.79
BXD62 m 145740.0 25981.0   5 11619.0 0.1783 119648.4, 187718.6 -0.91
BXD65 f 146641.0 16713.0   3 9650.0 0.114 136488.0, 165931.6 -0.84
BXD65 m 149479.0 30782.0   5 13766.0 0.2059 107189.4, 179843.2 -0.76
BXD66 f 165800.0 35869.0   2   25363.0 0.2163 140436.2, 191163.2 -0.21
BXD66 m 164676.0 27190.0   2   19226.0 0.1651 145450.2, 183902.8 -0.14
BXD68 f 202757.0 47314.0   2   33456.0 0.2334 169301.0, 236213.0 0.99
BXD68 m 177848.0 18784.0   3 10845.0 0.1056 165020.2, 199409.0 0.39
BXD69 f 160074.0 5571.0   4 2786.0 0.0348 152050.6, 164544.4 -0.4
BXD69 m 139882.0 13599.0   5 6082.0 0.0972 118668.2, 152017.8 -1.15
BXD70 f 145424.0 19749.0   5 8832.0 0.1358 118572.4, 164985.2 -0.88
BXD70 m 165613.0 24120.0   5 10787.0 0.1456 131126.6, 188113.6 -0.1
BXD71 m 155930.0 0.0   1   0.0 0.0 155930.4, 155930.4 -0.49
BXD73 f 160369.0 19472.0   5 8708.0 0.1214 137704.0, 182199.8 -0.39
BXD73 m 172343.0 27848.0   5 12454.0 0.1616 137674.6, 208656.2 0.17
BXD75 f 174968.0 26680.0   5 11932.0 0.1525 143970.2, 205777.0 0.08
BXD75 m 180762.0 57820.0   5 25858.0 0.3199 127121.8, 276373.4 0.51
BXD77 f 209976.0 94511.0   2   66829.0 0.4501 143146.4, 276805.2 1.22
BXD77 m 185809.0 44089.0   2   31175.0 0.2373 154633.8, 216984.8 0.72
BXD8 f 193916.0 14281.0   5 6386.0 0.0736 180003.6, 210698.0 0.7
BXD8 m 204425.0 16561.0   5 7406.0 0.081 185518.6, 229431.0 1.47
BXD80 f 157127.0 29162.0   5 13042.0 0.1856 124182.8, 193174.8 -0.5
BXD80 m 143993.0 11124.0   5 4975.0 0.0773 126309.2, 156162.6 -0.98
BXD81 f 178484.0 16892.0   5 7554.0 0.0946 149527.4, 193044.8 0.2
BXD81 m 182482.0 23278.0   5 10410.0 0.1276 141181.8, 196628.8 0.58
BXD84 f 171326.0 26569.0   5 11882.0 0.1551 128819.2, 197402.2 -0.03
BXD84 m 177623.0 17644.0   5 7890.0 0.0993 155414.4, 191217.0 0.39
BXD85 f 170094.0 9061.0   2   6407.0 0.0533 163686.6, 176501.2 -0.07
BXD85 m 122693.0 19589.0   2   13851.0 0.1597 108841.8, 136544.4 -1.84
BXD86 f 197791.0 39562.0   5 17693.0 0.2 154338.6, 242126.6 0.83
BXD86 m 200601.0 12819.0   4 6410.0 0.0639 186463.4, 212068.4 1.32
BXD87 f 132106.0 22870.0   5 10228.0 0.1731 101053.2, 155655.4 -1.31
BXD87 m 133219.0 19972.0   5 8932.0 0.1499 109132.2, 154938.0 -1.42
BXD89 f 162337.0 48627.0   5 21747.0 0.2995 123650.2, 247124.8 -0.33
BXD89 m 158987.0 10438.0   5 4668.0 0.0657 148051.0, 174954.0 -0.37
BXD90 f 192699.0 46127.0   3 26632.0 0.2394 142369.8, 232961.8 0.66
BXD90 m 199159.0 37926.0   3 21896.0 0.1904 170726.8, 242221.0 1.26
BXD92 f 209515.0 0.0   1   0.0 0.0 209515.2, 209515.2 1.21
BXD92 m 165628.0 0.0   1   0.0 0.0 165627.6, 165627.6 -0.1
BXD96 f 162148.0 17414.0   5 7788.0 0.1074 145282.6, 187525.8 -0.33
BXD96 m 139746.0 7365.0   5 3294.0 0.0527 130390.6, 146425.8 -1.15
BXD97 f 157429.0 56302.0   5 25179.0 0.3576 108055.0, 253734.2 -0.49
BXD97 m 135402.0 20514.0   4 10257.0 0.1515 112050.0, 161170.4 -1.33
BXD98 f 155773.0 17065.0   2   12067.0 0.1095 143706.4, 167839.8 -0.54
BXD98 m 176949.0 36728.0   4 18364.0 0.2076 135945.6, 223206.8 0.36
C57BL/6J f 238929.0 211268.0   5 94482.0 0.8842 117454.8, 615288.8 2.17
C57BL/6J m 150152.0 28311.0   5 12661.0 0.1886 119754.0, 184143.2 -0.73
DBA/2J f 197652.0 44302.0   5 19812.0 0.2241 136847.6, 240896.6 0.82
DBA/2J m 175470.0 18739.0   5 8380.0 0.1068 159342.2, 203909.8 0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 146257.68 16652.4447 179011.4448 113503.9152
BXD100 m 151428.24 16652.4447 184182.0048 118674.4752
BXD101 f 176115.7333 21498.2137 218400.6619 133830.8048
BXD101 m 171636.2 18617.9992 208256.0223 135016.3777
BXD102 f 147308.12 16652.4447 180061.8848 114554.3552
BXD102 m 132683.32 16652.4447 165437.0848 99929.5552
BXD11 f 183294.28 16652.4447 216048.0448 150540.5152
BXD11 m 150506.04 16652.4447 183259.8048 117752.2752
BXD13 f 177329.48 16652.4447 210083.2448 144575.7152
BXD13 m 163290.8 16652.4447 196044.5648 130537.0352
BXD14 f 190754.08 16652.4447 223507.8448 158000.3152
BXD14 m 253364.16 16652.4447 286117.9248 220610.3952
BXD15 f 184972.16 16652.4447 217725.9248 152218.3952
BXD15 m 194232.84 16652.4447 226986.6048 161479.0752
BXD16 f 181735.84 16652.4447 214489.6048 148982.0752
BXD16 m 175697.48 16652.4447 208451.2448 142943.7152
BXD2 f 161809.12 16652.4447 194562.8848 129055.3552
BXD2 m 182040.2 16652.4447 214793.9648 149286.4352
BXD21 f 190869.28 16652.4447 223623.0448 158115.5152
BXD21 m 162280.1667 15201.5327 192180.1264 132380.207
BXD27 f 138278.08 16652.4447 171031.8448 105524.3152
BXD27 m 167208.4 16652.4447 199962.1648 134454.6352
BXD28 f 156431.4 16652.4447 189185.1648 123677.6352
BXD28 m 150789.96 16652.4447 183543.7248 118036.1952
BXD31 f 159039.0 16652.4447 191792.7648 126285.2352
BXD31 m 163245.65 18617.9992 199865.4723 126625.8277
BXD32 f 155713.52 16652.4447 188467.2848 122959.7552
BXD32 m 181858.52 16652.4447 214612.2848 149104.7552
BXD39 f 161606.8 16652.4447 194360.5648 128853.0352
BXD39 m 175037.76 16652.4447 207791.5248 142283.9952
BXD40 f 206771.4 16652.4447 239525.1648 174017.6352
BXD40 m 208307.88 16652.4447 241061.6448 175554.1152
BXD42 f 179955.04 16652.4447 212708.8048 147201.2752
BXD42 m 170550.0 16652.4447 203303.7648 137796.2352
BXD43 f 153482.08 16652.4447 186235.8448 120728.3152
BXD43 m 148708.12 16652.4447 181461.8848 115954.3552
BXD44 f 149030.52 16652.4447 181784.2848 116276.7552
BXD44 m 174072.44 16652.4447 206826.2048 141318.6752
BXD48 f 168068.8 16652.4447 200822.5648 135315.0352
BXD48 m 159950.92 16652.4447 192704.6848 127197.1552
BXD49 f 165931.8 18617.9992 202551.6223 129311.9777
BXD49 m 171076.76 16652.4447 203830.5248 138322.9952
BXD50 f 124384.52 16652.4447 157138.2848 91630.7552
BXD50 m 138330.44 16652.4447 171084.2048 105576.6752
BXD51 f 126204.32 16652.4447 158958.0848 93450.5552
BXD51 m 137910.72 16652.4447 170664.4848 105156.9552
BXD6 f 174488.48 16652.4447 207242.2448 141734.7152
BXD6 m 200872.8 18617.9992 237492.6223 164252.9777
BXD61 f 149654.16 16652.4447 182407.9248 116900.3952
BXD61 m 169320.8 16652.4447 202074.5648 136567.0352
BXD62 f 147947.8 16652.4447 180701.5648 115194.0352
BXD62 m 145740.12 16652.4447 178493.8848 112986.3552
BXD65 f 146641.4667 21498.2137 188926.3952 104356.5381
BXD65 m 149479.16 16652.4447 182232.9248 116725.3952
BXD66 f 165799.7 26329.8269 217587.9493 114011.4507
BXD66 m 164676.5 26329.8269 216464.7493 112888.2507
BXD68 f 202757.0 26329.8269 254545.2493 150968.7507
BXD68 m 177848.0667 21498.2137 220132.9952 135563.1381
BXD69 f 160074.5 18617.9992 196694.3223 123454.6777
BXD69 m 139881.88 16652.4447 172635.6448 107128.1152
BXD70 f 145424.04 16652.4447 178177.8048 112670.2752
BXD70 m 165612.72 16652.4447 198366.4848 132858.9552
BXD73 f 160369.12 16652.4447 193122.8848 127615.3552
BXD73 m 172342.68 16652.4447 205096.4448 139588.9152
BXD75 f 174968.32 16652.4447 207722.0848 142214.5552
BXD75 m 180761.88 16652.4447 213515.6448 148008.1152
BXD77 f 209975.8 26329.8269 261764.0493 158187.5507
BXD77 m 185809.3 26329.8269 237597.5493 134021.0507
BXD8 f 193916.4 16652.4447 226670.1648 161162.6352
BXD8 m 204425.44 16652.4447 237179.2048 171671.6752
BXD80 f 157127.08 16652.4447 189880.8448 124373.3152
BXD80 m 143992.92 16652.4447 176746.6848 111239.1552
BXD81 f 178484.0 16652.4447 211237.7648 145730.2352
BXD81 m 182481.88 16652.4447 215235.6448 149728.1152
BXD84 f 171325.84 16652.4447 204079.6048 138572.0752
BXD84 m 177623.28 16652.4447 210377.0448 144869.5152
BXD85 f 170093.9 26329.8269 221882.1493 118305.6507
BXD85 m 122693.1 26329.8269 174481.3493 70904.8507
BXD86 f 197791.2 16652.4447 230544.9648 165037.4352
BXD86 m 200600.75 18617.9992 237220.5723 163980.9277
BXD87 f 132106.04 16652.4447 164859.8048 99352.2752
BXD87 m 133219.0 16652.4447 165972.7648 100465.2352
BXD89 f 162336.6 16652.4447 195090.3648 129582.8352
BXD89 m 158986.52 16652.4447 191740.2848 126232.7552
BXD90 f 192699.0 21498.2137 234983.9285 150414.0715
BXD90 m 199159.3333 21498.2137 241444.2619 156874.4048
BXD96 f 162147.84 16652.4447 194901.6048 129394.0752
BXD96 m 139745.88 16652.4447 172499.6448 106992.1152
BXD97 f 157428.88 16652.4447 190182.6448 124675.1152
BXD97 m 135401.65 18617.9992 172021.4723 98781.8277
BXD98 f 155773.1 26329.8269 207561.3493 103984.8507
BXD98 m 176949.45 18617.9992 213569.2723 140329.6277
C57BL/6J f 238929.2 16652.4447 271682.9648 206175.4352
C57BL/6J m 150151.64 16652.4447 182905.4048 117397.8752
DBA/2J f 197651.96 16652.4447 230405.7248 164898.1952
DBA/2J m 175470.32 16652.4447 208224.0848 142716.5552


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 148842.96 11775.0566 172003.3692 125682.5508
BXD101 both 173875.9667 14219.7318 201844.8179 145907.1154
BXD102 both 139995.72 11775.0566 163156.1292 116835.3108
BXD11 both 166900.16 11775.0566 190060.5692 143739.7508
BXD13 both 170310.14 11775.0566 193470.5492 147149.7308
BXD14 both 222059.12 11775.0566 245219.5292 198898.7108
BXD15 both 189602.5 11775.0566 212762.9092 166442.0908
BXD16 both 178716.66 11775.0566 201877.0692 155556.2508
BXD2 both 171924.66 11775.0566 195085.0692 148764.2508
BXD21 both 176574.7233 11273.7584 198749.1269 154400.3197
BXD27 both 152743.24 11775.0566 175903.6492 129582.8308
BXD28 both 153610.68 11775.0566 176771.0892 130450.2708
BXD31 both 161142.325 12489.3335 185707.6486 136577.0014
BXD32 both 168786.02 11775.0566 191946.4292 145625.6108
BXD39 both 168322.28 11775.0566 191482.6892 145161.8708
BXD40 both 207539.64 11775.0566 230700.0492 184379.2308
BXD42 both 175252.52 11775.0566 198412.9292 152092.1108
BXD43 both 151095.1 11775.0566 174255.5092 127934.6908
BXD44 both 161551.48 11775.0566 184711.8892 138391.0708
BXD48 both 164009.86 11775.0566 187170.2692 140849.4508
BXD49 both 168504.28 12489.3335 193069.6036 143938.9564
BXD50 both 131357.48 11775.0566 154517.8892 108197.0708
BXD51 both 132057.52 11775.0566 155217.9292 108897.1108
BXD6 both 187680.64 12489.3335 212245.9636 163115.3164
BXD61 both 159487.48 11775.0566 182647.8892 136327.0708
BXD62 both 146843.96 11775.0566 170004.3692 123683.5508
BXD65 both 148060.3133 13596.6642 174803.6503 121316.9764
BXD66 both 165238.1 18617.9992 201857.9223 128618.2777
BXD68 both 190302.5333 16995.8302 223731.7045 156873.3621
BXD69 both 149978.19 12489.3335 174543.5136 125412.8664
BXD70 both 155518.38 11775.0566 178678.7892 132357.9708
BXD73 both 166355.9 11775.0566 189516.3092 143195.4908
BXD75 both 177865.1 11775.0566 201025.5092 154704.6908
BXD77 both 197892.55 18617.9992 234512.3723 161272.7277
BXD8 both 199170.92 11775.0566 222331.3292 176010.5108
BXD80 both 150560.0 11775.0566 173720.4092 127399.5908
BXD81 both 180482.94 11775.0566 203643.3492 157322.5308
BXD84 both 174474.56 11775.0566 197634.9692 151314.1508
BXD85 both 146393.5 18617.9992 183013.3223 109773.6777
BXD86 both 199195.975 12489.3335 223761.2986 174630.6514
BXD87 both 132662.52 11775.0566 155822.9292 109502.1108
BXD89 both 160661.56 11775.0566 183821.9692 137501.1508
BXD90 both 195929.1667 15201.5327 225829.1264 166029.207
BXD96 both 150946.86 11775.0566 174107.2692 127786.4508
BXD97 both 146415.265 12489.3335 170980.5886 121849.9414
BXD98 both 166361.275 16123.6603 198074.9714 134647.5786
C57BL/6J both 194540.42 11775.0566 217700.8292 171380.0108
DBA/2J both 186561.14 11775.0566 209721.5492 163400.7308




  GWAS USING LINEAR MIXED MODELS