Project measure / variable:   Crusio1   iipmf_R

ID, description, units MPD:62051   iipmf_R   size of intra- and infrapyramidal mossy fibers (arbitrary units)    right  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
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  STRAIN COMPARISON PLOT
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Crusio1 - size of intra- and infrapyramidal mossy fibers (arbitrary units) right



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means35206.0   None 35460.0   None
Median of the strain means33526.0   None 33031.0   None
SD of the strain means± 10006.0 ± 8621.0
Coefficient of variation (CV)0.2842 0.2431
Min–max range of strain means21424.0   –   62878.0   None 21668.0   –   58066.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 107179987.5571 107179987.5571 1.0201 0.3132
strain 47 32649753970.0141 694675616.3833 6.6115 < 0.0001
sex:strain 47 4747229425.364 101004881.3907 0.9613 0.5487
Residuals 343 36039039261.5514 105070085.3106


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 32937.0 0.0   1   0.0 0.0 32936.8, 32936.8 -0.23
BXD1 m 26854.0 0.0   1   0.0 0.0 26854.2, 26854.2 -1.0
BXD100 f 34287.0 5391.0   5 2411.0 0.1572 28613.8, 42677.0 -0.09
BXD100 m 36400.0 5879.0   5 2629.0 0.1615 28712.2, 42879.0 0.11
BXD101 f 31539.0 6330.0   3 3655.0 0.2007 24242.8, 35568.8 -0.37
BXD101 m 32235.0 8696.0   4 4348.0 0.2698 23699.0, 42373.0 -0.37
BXD102 f 34388.0 19657.0   5 8791.0 0.5716 19509.8, 68246.0 -0.08
BXD102 m 38273.0 5047.0   5 2257.0 0.1319 30984.2, 43134.0 0.33
BXD11 f 40961.0 12857.0   5 5750.0 0.3139 28856.4, 61867.0 0.58
BXD11 m 33764.0 15013.0   5 6714.0 0.4446 16257.0, 49805.4 -0.2
BXD13 f 36509.0 9799.0   5 4382.0 0.2684 28210.0, 51008.8 0.13
BXD13 m 27070.0 12626.0   5 5647.0 0.4664 17161.6, 46552.2 -0.97
BXD14 f 30456.0 5549.0   5 2482.0 0.1822 25008.0, 37425.4 -0.47
BXD14 m 32011.0 11601.0   5 5188.0 0.3624 20760.2, 47062.2 -0.4
BXD15 f 24637.0 8256.0   5 3692.0 0.3351 15178.0, 36212.8 -1.06
BXD15 m 22864.0 9406.0   5 4207.0 0.4114 11496.6, 34128.6 -1.46
BXD16 f 45038.0 17621.0   5 7880.0 0.3912 28220.8, 70499.4 0.98
BXD16 m 35276.0 11576.0   5 5177.0 0.3282 21860.8, 47869.4 -0.02
BXD18 f 21424.0 0.0   1   0.0 0.0 21424.0, 21424.0 -1.38
BXD18 m 34607.0 0.0   1   0.0 0.0 34607.2, 34607.2 -0.1
BXD19 f 62878.0 0.0   1   0.0 0.0 62877.6, 62877.6 2.77
BXD19 m 27658.0 0.0   1   0.0 0.0 27658.0, 27658.0 -0.9
BXD2 f 40652.0 7392.0   5 3306.0 0.1818 33958.8, 51794.0 0.54
BXD2 m 39635.0 9076.0   5 4059.0 0.229 33145.0, 55525.6 0.48
BXD21 f 54813.0 12628.0   5 5647.0 0.2304 43108.4, 68403.8 1.96
BXD21 m 38035.0 9767.0   6 3987.0 0.2568 23694.0, 48705.0 0.3
BXD27 f 23750.0 8219.0   5 3676.0 0.3461 11868.2, 34893.2 -1.14
BXD27 m 30183.0 8202.0   5 3668.0 0.2717 22714.2, 41884.0 -0.61
BXD28 f 37403.0 13768.0   5 6157.0 0.3681 21481.2, 58527.8 0.22
BXD28 m 42003.0 2621.0   5 1172.0 0.0624 37769.8, 44366.0 0.76
BXD31 f 25411.0 7647.0   5 3420.0 0.3009 17158.8, 34533.6 -0.98
BXD31 m 28527.0 8062.0   4 4031.0 0.2826 19301.4, 37749.2 -0.8
BXD32 f 24255.0 4405.0   5 1970.0 0.1816 17466.8, 28824.6 -1.09
BXD32 m 27763.0 8055.0   5 3602.0 0.2902 18893.0, 37985.0 -0.89
BXD33 m 37170.0 0.0   1   0.0 0.0 37169.8, 37169.8 0.2
BXD34 f 43542.0 0.0   1   0.0 0.0 43541.6, 43541.6 0.83
BXD34 m 31247.0 0.0   1   0.0 0.0 31247.2, 31247.2 -0.49
BXD39 f 41607.0 8658.0   5 3872.0 0.2081 28776.4, 52336.6 0.64
BXD39 m 35369.0 9335.0   5 4175.0 0.2639 24929.0, 43760.2 -0.01
BXD40 f 32950.0 6340.0   5 2835.0 0.1924 23857.8, 41625.6 -0.23
BXD40 m 42557.0 2196.0   5 981.9 0.0516 40275.8, 44988.6 0.82
BXD42 f 31777.0 8309.0   5 3716.0 0.2615 20779.4, 39743.2 -0.34
BXD42 m 28205.0 3881.0   5 1736.0 0.1376 23487.6, 32916.0 -0.84
BXD43 f 37548.0 12588.0   5 5629.0 0.3353 23971.4, 51625.8 0.23
BXD43 m 32907.0 7460.0   5 3336.0 0.2267 22458.4, 40099.8 -0.3
BXD44 f 30656.0 4161.0   5 1861.0 0.1357 26046.2, 35219.2 -0.45
BXD44 m 42569.0 14743.0   5 6593.0 0.3463 28222.6, 61097.0 0.82
BXD48 f 28252.0 6482.0   5 2899.0 0.2294 17902.0, 34930.4 -0.69
BXD48 m 25774.0 8934.0   5 3995.0 0.3466 18217.2, 39846.2 -1.12
BXD49 f 36092.0 10969.0   4 5484.0 0.3039 21477.2, 47792.0 0.09
BXD49 m 40674.0 15924.0   5 7122.0 0.3915 23183.0, 62052.0 0.6
BXD50 f 24768.0 2030.0   5 907.6 0.0819 22671.0, 27986.8 -1.04
BXD50 m 32889.0 11591.0   5 5184.0 0.3524 21204.2, 47333.4 -0.3
BXD51 f 45035.0 13069.0   5 5845.0 0.2902 31865.0, 61257.2 0.98
BXD51 m 45454.0 11110.0   5 4969.0 0.2444 36460.8, 62986.4 1.16
BXD6 f 22512.0 4928.0   5 2204.0 0.2189 17882.4, 30012.0 -1.27
BXD6 m 33031.0 9010.0   4 4505.0 0.2728 22805.4, 44184.0 -0.28
BXD61 f 47139.0 4794.0   5 2144.0 0.1017 41806.8, 51869.6 1.19
BXD61 m 52610.0 10837.0   5 4846.0 0.206 42856.2, 70328.6 1.99
BXD62 f 50811.0 8200.0   5 3667.0 0.1614 39940.6, 59278.0 1.56
BXD62 m 54990.0 17475.0   5 7815.0 0.3178 41967.0, 85036.4 2.27
BXD65 f 38469.0 6221.0   3 3592.0 0.1617 32450.6, 44874.8 0.33
BXD65 m 35136.0 4727.0   5 2114.0 0.1345 27373.4, 39696.4 -0.04
BXD66 f 36804.0 1396.0   2   987.3 0.0379 35816.6, 37791.2 0.16
BXD66 m 35532.0 7133.0   2   5044.0 0.2008 30487.6, 40575.6 0.01
BXD68 f 25279.0 2261.0   2   1599.0 0.0895 23680.4, 26878.4 -0.99
BXD68 m 29992.0 6452.0   3 3725.0 0.2151 24173.6, 36930.0 -0.63
BXD69 f 40111.0 5327.0   4 2663.0 0.1328 36374.0, 48000.8 0.49
BXD69 m 54077.0 11346.0   5 5074.0 0.2098 41773.8, 67918.6 2.16
BXD70 f 38898.0 11110.0   5 4969.0 0.2856 21839.4, 52728.8 0.37
BXD70 m 50768.0 12775.0   5 5713.0 0.2516 34402.8, 70066.0 1.78
BXD71 m 43270.0 0.0   1   0.0 0.0 43270.4, 43270.4 0.91
BXD73 f 27092.0 5441.0   5 2433.0 0.2008 20653.2, 35622.8 -0.81
BXD73 m 35286.0 8388.0   5 3751.0 0.2377 26629.6, 48604.8 -0.02
BXD75 f 38326.0 5237.0   5 2342.0 0.1367 32417.8, 46413.0 0.31
BXD75 m 40070.0 13247.0   5 5924.0 0.3306 23176.6, 58969.8 0.53
BXD77 f 33526.0 17282.0   2   12220.0 0.5155 21305.2, 45746.0 -0.17
BXD77 m 31237.0 10005.0   2   7074.0 0.3203 24162.6, 38311.4 -0.49
BXD8 f 59386.0 14067.0   5 6291.0 0.2369 39741.8, 72130.6 2.42
BXD8 m 48647.0 15249.0   5 6819.0 0.3135 28578.6, 68906.2 1.53
BXD80 f 37762.0 8465.0   5 3786.0 0.2242 24112.8, 45415.6 0.26
BXD80 m 30305.0 3282.0   5 1468.0 0.1083 27005.0, 34755.8 -0.6
BXD81 f 27436.0 7414.0   5 3316.0 0.2702 20055.8, 38427.0 -0.78
BXD81 m 26638.0 11594.0   5 5185.0 0.4352 13618.2, 41572.4 -1.02
BXD84 f 26801.0 10547.0   5 4717.0 0.3935 18177.8, 44759.0 -0.84
BXD84 m 25999.0 5049.0   5 2258.0 0.1942 18677.2, 31624.4 -1.1
BXD85 f 28527.0 6724.0   2   4755.0 0.2357 23771.8, 33281.6 -0.67
BXD85 m 26245.0 5237.0   2   3703.0 0.1995 22542.2, 29947.8 -1.07
BXD86 f 21592.0 8003.0   5 3579.0 0.3706 11810.6, 33151.0 -1.36
BXD86 m 21668.0 2962.0   4 1481.0 0.1367 18592.8, 25510.0 -1.6
BXD87 f 26619.0 6087.0   5 2722.0 0.2287 18188.8, 35176.2 -0.86
BXD87 m 25694.0 7520.0   5 3363.0 0.2927 19976.2, 38770.2 -1.13
BXD89 f 37248.0 8499.0   5 3801.0 0.2282 28496.6, 50312.4 0.2
BXD89 m 48396.0 12777.0   5 5714.0 0.264 37053.6, 70412.8 1.5
BXD90 f 40459.0 23958.0   3 13832.0 0.5922 21390.6, 67350.4 0.52
BXD90 m 42613.0 11684.0   3 6746.0 0.2742 31121.8, 54480.6 0.83
BXD92 f 23239.0 0.0   1   0.0 0.0 23238.6, 23238.6 -1.2
BXD92 m 28070.0 0.0   1   0.0 0.0 28069.6, 28069.6 -0.86
BXD96 f 31921.0 3936.0   5 1760.0 0.1233 25938.4, 35328.6 -0.33
BXD96 m 30419.0 12119.0   5 5420.0 0.3984 19384.8, 50475.8 -0.58
BXD97 f 31324.0 13977.0   5 6251.0 0.4462 11985.6, 46663.2 -0.39
BXD97 m 32712.0 8251.0   4 4125.0 0.2522 22953.2, 41313.8 -0.32
BXD98 f 31647.0 14841.0   2   10494.0 0.469 21152.6, 42140.8 -0.36
BXD98 m 32128.0 8182.0   4 4091.0 0.2547 20199.2, 38585.0 -0.39
C57BL/6J f 61970.0 16658.0   5 7450.0 0.2688 44377.8, 85961.6 2.67
C57BL/6J m 58066.0 15541.0   5 6950.0 0.2676 30527.0, 68118.4 2.62
DBA/2J f 27441.0 12743.0   5 5699.0 0.4644 13332.4, 42916.8 -0.78
DBA/2J m 28707.0 12084.0   5 5404.0 0.4209 17268.8, 49165.8 -0.78


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 34287.44 4584.1048 43303.9354 25270.9446
BXD100 m 36400.2 4584.1048 45416.6954 27383.7046
BXD101 f 31538.8667 5918.0539 43179.1122 19898.6211
BXD101 m 32234.85 5125.185 42315.5983 22154.1017
BXD102 f 34387.96 4584.1048 43404.4554 25371.4646
BXD102 m 38273.16 4584.1048 47289.6554 29256.6646
BXD11 f 40960.96 4584.1048 49977.4554 31944.4646
BXD11 m 33763.56 4584.1048 42780.0554 24747.0646
BXD13 f 36508.6 4584.1048 45525.0954 27492.1046
BXD13 m 27069.72 4584.1048 36086.2154 18053.2246
BXD14 f 30456.44 4584.1048 39472.9354 21439.9446
BXD14 m 32010.52 4584.1048 41027.0154 22994.0246
BXD15 f 24637.4 4584.1048 33653.8954 15620.9046
BXD15 m 22863.76 4584.1048 31880.2554 13847.2646
BXD16 f 45037.88 4584.1048 54054.3754 36021.3846
BXD16 m 35276.44 4584.1048 44292.9354 26259.9446
BXD2 f 40651.96 4584.1048 49668.4554 31635.4646
BXD2 m 39635.08 4584.1048 48651.5754 30618.5846
BXD21 f 54812.8 4584.1048 63829.2954 45796.3046
BXD21 m 38034.975 4184.696 46265.8715 29804.0785
BXD27 f 23750.04 4584.1048 32766.5354 14733.5446
BXD27 m 30182.68 4584.1048 39199.1754 21166.1846
BXD28 f 37402.96 4584.1048 46419.4554 28386.4646
BXD28 m 42003.08 4584.1048 51019.5754 32986.5846
BXD31 f 25411.4 4584.1048 34427.8954 16394.9046
BXD31 m 28527.15 5125.185 38607.8983 18446.4017
BXD32 f 24255.4 4584.1048 33271.8954 15238.9046
BXD32 m 27762.72 4584.1048 36779.2154 18746.2246
BXD39 f 41606.56 4584.1048 50623.0554 32590.0646
BXD39 m 35368.92 4584.1048 44385.4154 26352.4246
BXD40 f 32949.56 4584.1048 41966.0554 23933.0646
BXD40 m 42557.48 4584.1048 51573.9754 33540.9846
BXD42 f 31777.2 4584.1048 40793.6954 22760.7046
BXD42 m 28205.04 4584.1048 37221.5354 19188.5446
BXD43 f 37547.6 4584.1048 46564.0954 28531.1046
BXD43 m 32907.48 4584.1048 41923.9754 23890.9846
BXD44 f 30655.76 4584.1048 39672.2554 21639.2646
BXD44 m 42568.6 4584.1048 51585.0954 33552.1046
BXD48 f 28252.28 4584.1048 37268.7754 19235.7846
BXD48 m 25774.2 4584.1048 34790.6954 16757.7046
BXD49 f 36091.5 5125.185 46172.2483 26010.7517
BXD49 m 40674.28 4584.1048 49690.7754 31657.7846
BXD50 f 24768.44 4584.1048 33784.9354 15751.9446
BXD50 m 32889.0 4584.1048 41905.4954 23872.5046
BXD51 f 45035.28 4584.1048 54051.7754 36018.7846
BXD51 m 45454.04 4584.1048 54470.5354 36437.5446
BXD6 f 22512.24 4584.1048 31528.7354 13495.7446
BXD6 m 33030.8 5125.185 43111.5483 22950.0517
BXD61 f 47139.28 4584.1048 56155.7754 38122.7846
BXD61 m 52609.52 4584.1048 61626.0154 43593.0246
BXD62 f 50810.68 4584.1048 59827.1754 41794.1846
BXD62 m 54989.68 4584.1048 64006.1754 45973.1846
BXD65 f 38469.2667 5918.0539 50109.5122 26829.0211
BXD65 m 35136.12 4584.1048 44152.6154 26119.6246
BXD66 f 36803.9 7248.1061 51060.231 22547.569
BXD66 m 35531.6 7248.1061 49787.931 21275.269
BXD68 f 25279.4 7248.1061 39535.731 11023.069
BXD68 m 29991.8 5918.0539 41632.0455 18351.5545
BXD69 f 40110.55 5125.185 50191.2983 30029.8017
BXD69 m 54077.04 4584.1048 63093.5354 45060.5446
BXD70 f 38898.0 4584.1048 47914.4954 29881.5046
BXD70 m 50768.44 4584.1048 59784.9354 41751.9446
BXD73 f 27092.32 4584.1048 36108.8154 18075.8246
BXD73 m 35285.92 4584.1048 44302.4154 26269.4246
BXD75 f 38326.36 4584.1048 47342.8554 29309.8646
BXD75 m 40069.68 4584.1048 49086.1754 31053.1846
BXD77 f 33525.6 7248.1061 47781.931 19269.269
BXD77 m 31237.0 7248.1061 45493.331 16980.669
BXD8 f 59386.0 4584.1048 68402.4954 50369.5046
BXD8 m 48647.44 4584.1048 57663.9354 39630.9446
BXD80 f 37761.96 4584.1048 46778.4554 28745.4646
BXD80 m 30304.68 4584.1048 39321.1754 21288.1846
BXD81 f 27436.2 4584.1048 36452.6954 18419.7046
BXD81 m 26637.52 4584.1048 35654.0154 17621.0246
BXD84 f 26800.92 4584.1048 35817.4154 17784.4246
BXD84 m 25998.72 4584.1048 35015.2154 16982.2246
BXD85 f 28526.7 7248.1061 42783.031 14270.369
BXD85 m 26245.0 7248.1061 40501.331 11988.669
BXD86 f 21592.4 4584.1048 30608.8954 12575.9046
BXD86 m 21668.1 5125.185 31748.8483 11587.3517
BXD87 f 26619.48 4584.1048 35635.9754 17602.9846
BXD87 m 25694.48 4584.1048 34710.9754 16677.9846
BXD89 f 37247.8 4584.1048 46264.2954 28231.3046
BXD89 m 48396.32 4584.1048 57412.8154 39379.8246
BXD90 f 40458.8667 5918.0539 52099.1122 28818.6211
BXD90 m 42612.9333 5918.0539 54253.1789 30972.6878
BXD96 f 31920.96 4584.1048 40937.4554 22904.4646
BXD96 m 30418.6 4584.1048 39435.0954 21402.1046
BXD97 f 31324.2 4584.1048 40340.6954 22307.7046
BXD97 m 32712.5 5125.185 42793.2483 22631.7517
BXD98 f 31646.7 7248.1061 45903.031 17390.369
BXD98 m 32127.7 5125.185 42208.4483 22046.9517
C57BL/6J f 61969.68 4584.1048 70986.1754 52953.1846
C57BL/6J m 58065.88 4584.1048 67082.3754 49049.3846
DBA/2J f 27440.92 4584.1048 36457.4154 18424.4246
DBA/2J m 28707.0 4584.1048 37723.4954 19690.5046


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 35343.82 3241.4516 41719.445 28968.195
BXD101 both 31886.8583 3914.4247 39586.157 24187.5596
BXD102 both 36330.56 3241.4516 42706.185 29954.935
BXD11 both 37362.26 3241.4516 43737.885 30986.635
BXD13 both 31789.16 3241.4516 38164.785 25413.535
BXD14 both 31233.48 3241.4516 37609.105 24857.855
BXD15 both 23750.58 3241.4516 30126.205 17374.955
BXD16 both 40157.16 3241.4516 46532.785 33781.535
BXD2 both 40143.52 3241.4516 46519.145 33767.895
BXD21 both 46423.8875 3103.4536 52528.0837 40319.6913
BXD27 both 26966.36 3241.4516 33341.985 20590.735
BXD28 both 39703.02 3241.4516 46078.645 33327.395
BXD31 both 26969.275 3438.0786 33731.6466 20206.9034
BXD32 both 26009.06 3241.4516 32384.685 19633.435
BXD39 both 38487.74 3241.4516 44863.365 32112.115
BXD40 both 37753.52 3241.4516 44129.145 31377.895
BXD42 both 29991.12 3241.4516 36366.745 23615.495
BXD43 both 35227.54 3241.4516 41603.165 28851.915
BXD44 both 36612.18 3241.4516 42987.805 30236.555
BXD48 both 27013.24 3241.4516 33388.865 20637.615
BXD49 both 38382.89 3438.0786 45145.2616 31620.5184
BXD50 both 28828.72 3241.4516 35204.345 22453.095
BXD51 both 45244.66 3241.4516 51620.285 38869.035
BXD6 both 27771.52 3438.0786 34533.8916 21009.1484
BXD61 both 49874.4 3241.4516 56250.025 43498.775
BXD62 both 52900.18 3241.4516 59275.805 46524.555
BXD65 both 36802.6933 3742.9059 44164.631 29440.7557
BXD66 both 36167.75 5125.185 46248.4983 26087.0017
BXD68 both 27635.6 4678.6324 36838.0221 18433.1779
BXD69 both 47093.795 3438.0786 53856.1666 40331.4234
BXD70 both 44833.22 3241.4516 51208.845 38457.595
BXD73 both 31189.12 3241.4516 37564.745 24813.495
BXD75 both 39198.02 3241.4516 45573.645 32822.395
BXD77 both 32381.3 5125.185 42462.0483 22300.5517
BXD8 both 54016.72 3241.4516 60392.345 47641.095
BXD80 both 34033.32 3241.4516 40408.945 27657.695
BXD81 both 27036.86 3241.4516 33412.485 20661.235
BXD84 both 26399.82 3241.4516 32775.445 20024.195
BXD85 both 27385.85 5125.185 37466.5983 17305.1017
BXD86 both 21630.25 3438.0786 28392.6216 14867.8784
BXD87 both 26156.98 3241.4516 32532.605 19781.355
BXD89 both 42822.06 3241.4516 49197.685 36446.435
BXD90 both 41535.9 4184.696 49766.7965 33305.0035
BXD96 both 31169.78 3241.4516 37545.405 24794.155
BXD97 both 32018.35 3438.0786 38780.7216 25255.9784
BXD98 both 31887.2 4438.5404 40617.3841 23157.0159
C57BL/6J both 60017.78 3241.4516 66393.405 53642.155
DBA/2J both 28073.96 3241.4516 34449.585 21698.335




  GWAS USING LINEAR MIXED MODELS