Project measure / variable:   Crusio1   iipmf_L

ID, description, units MPD:62050   iipmf_L   size of intra- and infrapyramidal mossy fibers (arbitrary units)    left  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 12-16wks
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  STRAIN COMPARISON PLOT
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Crusio1 - size of intra- and infrapyramidal mossy fibers (arbitrary units) left



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested53 strains55 strains
Mean of the strain means35735.0   None 35950.0   None
Median of the strain means33044.0   None 34942.0   None
SD of the strain means± 12661.0 ± 9902.0
Coefficient of variation (CV)0.3543 0.2754
Min–max range of strain means19291.0   –   94970.0   None 20037.0   –   64272.0   None
Mean sample size per strain4.2   mice 4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 17609641.241 17609641.241 0.0954 0.7576
strain 47 46212377737.5771 983242079.5229 5.3288 < 0.0001
sex:strain 47 5920362870.1751 125965167.4505 0.6827 0.9446
Residuals 343 63288449921.074 184514431.2568


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 34125.0 0.0   1   0.0 0.0 34125.0, 34125.0 -0.13
BXD1 m 29130.0 0.0   1   0.0 0.0 29129.8, 29129.8 -0.69
BXD100 f 32416.0 11486.0   5 5137.0 0.3543 16794.2, 48836.0 -0.26
BXD100 m 36106.0 8195.0   5 3665.0 0.227 26244.0, 45502.8 0.02
BXD101 f 29336.0 6382.0   3 3685.0 0.2176 24539.2, 36579.2 -0.51
BXD101 m 33222.0 13269.0   4 6635.0 0.3994 21810.0, 48663.8 -0.28
BXD102 f 38019.0 17309.0   5 7741.0 0.4553 23143.2, 66422.0 0.18
BXD102 m 34942.0 12543.0   5 5610.0 0.359 16280.2, 51379.8 -0.1
BXD11 f 40092.0 7873.0   5 3521.0 0.1964 29477.2, 47830.0 0.34
BXD11 m 34748.0 14912.0   5 6669.0 0.4291 14725.4, 51159.8 -0.12
BXD13 f 31261.0 4065.0   5 1818.0 0.13 24005.8, 33417.4 -0.35
BXD13 m 28767.0 12099.0   5 5411.0 0.4206 17597.8, 47113.6 -0.73
BXD14 f 33044.0 2938.0   5 1314.0 0.0889 27995.4, 35131.8 -0.21
BXD14 m 43620.0 16416.0   5 7341.0 0.3763 25652.0, 67605.2 0.77
BXD15 f 23208.0 8802.0   5 3936.0 0.3793 14337.6, 33771.4 -0.99
BXD15 m 21866.0 3218.0   5 1439.0 0.1472 18263.2, 25566.2 -1.42
BXD16 f 34755.0 13264.0   5 5932.0 0.3816 22728.2, 56466.0 -0.08
BXD16 m 35945.0 14324.0   5 6406.0 0.3985 15613.2, 52568.8 0.0
BXD18 f 27741.0 0.0   1   0.0 0.0 27740.6, 27740.6 -0.63
BXD18 m 34169.0 0.0   1   0.0 0.0 34169.4, 34169.4 -0.18
BXD19 f 67877.0 0.0   1   0.0 0.0 67876.8, 67876.8 2.54
BXD19 m 27459.0 0.0   1   0.0 0.0 27458.8, 27458.8 -0.86
BXD2 f 38420.0 13989.0   5 6256.0 0.3641 30162.8, 63302.6 0.21
BXD2 m 43358.0 16706.0   5 7471.0 0.3853 32081.6, 72820.2 0.75
BXD21 f 47187.0 5974.0   5 2672.0 0.1266 40568.2, 56096.0 0.9
BXD21 m 37383.0 13600.0   6 5552.0 0.3638 20105.6, 48933.6 0.14
BXD27 f 29022.0 9870.0   5 4414.0 0.3401 13967.0, 40131.0 -0.53
BXD27 m 39005.0 5002.0   5 2237.0 0.1282 33139.0, 43749.2 0.31
BXD28 f 43251.0 16216.0   5 7252.0 0.3749 30185.4, 70123.8 0.59
BXD28 m 40988.0 5443.0   5 2434.0 0.1328 34910.0, 49500.4 0.51
BXD31 f 27578.0 11487.0   5 5137.0 0.4165 16298.8, 45825.2 -0.64
BXD31 m 31419.0 12882.0   4 6441.0 0.41 17501.2, 46542.8 -0.46
BXD32 f 23240.0 3897.0   5 1743.0 0.1677 16513.4, 26242.0 -0.99
BXD32 m 21099.0 7012.0   5 3136.0 0.3323 16925.4, 33564.4 -1.5
BXD33 m 64272.0 0.0   1   0.0 0.0 64272.2, 64272.2 2.86
BXD34 f 40435.0 0.0   1   0.0 0.0 40435.4, 40435.4 0.37
BXD34 m 39909.0 0.0   1   0.0 0.0 39909.2, 39909.2 0.4
BXD39 f 37951.0 8368.0   5 3742.0 0.2205 31944.0, 52592.8 0.18
BXD39 m 37036.0 8599.0   5 3846.0 0.2322 28010.8, 48669.0 0.11
BXD40 f 35908.0 6463.0   5 2890.0 0.18 27161.6, 42274.4 0.01
BXD40 m 39562.0 4288.0   5 1917.0 0.1084 34146.2, 45172.8 0.36
BXD42 f 31215.0 10305.0   5 4608.0 0.3301 21537.6, 46533.4 -0.36
BXD42 m 28169.0 8948.0   5 4002.0 0.3176 20657.8, 43078.4 -0.79
BXD43 f 33687.0 12022.0   5 5377.0 0.3569 22877.4, 52291.8 -0.16
BXD43 m 36339.0 11036.0   5 4935.0 0.3037 21339.2, 51211.6 0.04
BXD44 f 27485.0 4935.0   5 2207.0 0.1796 20256.4, 32227.6 -0.65
BXD44 m 35063.0 5354.0   5 2395.0 0.1527 28497.0, 41299.0 -0.09
BXD48 f 27557.0 3953.0   5 1768.0 0.1435 23768.6, 32056.4 -0.65
BXD48 m 25444.0 7945.0   5 3553.0 0.3122 16650.8, 33465.2 -1.06
BXD49 f 36258.0 9320.0   4 4660.0 0.257 22443.8, 42414.6 0.04
BXD49 m 40066.0 21220.0   5 9490.0 0.5296 22126.0, 72438.6 0.42
BXD50 f 22900.0 4172.0   5 1866.0 0.1822 18146.4, 28567.2 -1.01
BXD50 m 30902.0 10549.0   5 4718.0 0.3414 20636.6, 48208.4 -0.51
BXD51 f 41671.0 16645.0   5 7444.0 0.3994 27908.6, 69155.0 0.47
BXD51 m 45863.0 6112.0   5 2733.0 0.1333 37484.4, 53662.0 1.0
BXD6 f 25349.0 3738.0   5 1672.0 0.1475 19923.0, 29597.4 -0.82
BXD6 m 31770.0 10254.0   4 5127.0 0.3228 22401.6, 45716.6 -0.42
BXD61 f 46269.0 3788.0   5 1694.0 0.0819 42829.0, 52280.6 0.83
BXD61 m 49912.0 8577.0   5 3836.0 0.1718 41669.4, 63120.4 1.41
BXD62 f 48615.0 8399.0   5 3756.0 0.1728 37929.0, 56657.0 1.02
BXD62 m 55448.0 17487.0   5 7820.0 0.3154 40223.6, 82629.4 1.97
BXD65 f 33745.0 7567.0   3 4369.0 0.2242 25230.2, 39699.4 -0.16
BXD65 m 34361.0 10186.0   5 4555.0 0.2964 24916.4, 50395.0 -0.16
BXD66 f 32963.0 532.2   2   376.3 0.0161 32586.4, 33339.0 -0.22
BXD66 m 42580.0 16057.0   2   11354.0 0.3771 31226.4, 53934.0 0.67
BXD68 f 26464.0 3986.0   2   2818.0 0.1506 23645.8, 29282.4 -0.73
BXD68 m 31348.0 4988.0   3 2880.0 0.1591 27821.8, 37054.2 -0.46
BXD69 f 50289.0 8948.0   4 4474.0 0.1779 41877.8, 61925.2 1.15
BXD69 m 47002.0 9204.0   5 4116.0 0.1958 35123.4, 58921.0 1.12
BXD70 f 42155.0 6778.0   5 3031.0 0.1608 30616.0, 47976.0 0.51
BXD70 m 48512.0 11692.0   5 5229.0 0.241 33713.0, 65046.4 1.27
BXD71 m 43465.0 0.0   1   0.0 0.0 43465.4, 43465.4 0.76
BXD73 f 29434.0 8856.0   5 3960.0 0.3009 22088.6, 44143.2 -0.5
BXD73 m 33232.0 11397.0   5 5097.0 0.343 23334.4, 52840.6 -0.27
BXD75 f 36039.0 6346.0   5 2838.0 0.1761 30384.6, 45518.0 0.02
BXD75 m 38225.0 10855.0   5 4855.0 0.284 24960.0, 54350.2 0.23
BXD77 f 34344.0 23838.0   2   16856.0 0.6941 17488.2, 51200.0 -0.11
BXD77 m 23686.0 8951.0   2   6329.0 0.3779 17356.4, 30015.0 -1.24
BXD8 f 58851.0 11797.0   5 5276.0 0.2004 38504.8, 68019.2 1.83
BXD8 m 58041.0 10510.0   5 4700.0 0.1811 47126.4, 75030.6 2.23
BXD80 f 41369.0 12234.0   5 5471.0 0.2957 26861.2, 59261.4 0.44
BXD80 m 35208.0 5758.0   5 2575.0 0.1635 26718.0, 41456.4 -0.07
BXD81 f 28847.0 9493.0   5 4246.0 0.3291 16033.8, 38839.0 -0.54
BXD81 m 26595.0 11864.0   5 5306.0 0.4461 14871.4, 42478.6 -0.94
BXD84 f 25221.0 7791.0   5 3484.0 0.3089 18191.6, 37830.0 -0.83
BXD84 m 26570.0 7634.0   5 3414.0 0.2873 17045.8, 36256.0 -0.95
BXD85 f 24942.0 3109.0   2   2199.0 0.1247 22743.2, 27140.4 -0.85
BXD85 m 20037.0 4081.0   2   2886.0 0.2037 17150.8, 22922.4 -1.61
BXD86 f 19291.0 7149.0   5 3197.0 0.3706 10711.8, 27789.4 -1.3
BXD86 m 25207.0 1580.0   4 790.1 0.0627 23030.0, 26680.2 -1.08
BXD87 f 27077.0 9098.0   5 4069.0 0.336 19961.4, 42779.2 -0.68
BXD87 m 31075.0 10696.0   5 4783.0 0.3442 16778.6, 45139.2 -0.49
BXD89 f 48336.0 21398.0   5 9569.0 0.4427 35195.8, 86127.0 1.0
BXD89 m 44982.0 9485.0   5 4242.0 0.2109 35462.4, 59262.2 0.91
BXD90 f 45573.0 24233.0   3 13991.0 0.5318 23315.6, 71389.0 0.78
BXD90 m 43708.0 5331.0   3 3078.0 0.122 39789.0, 49778.8 0.78
BXD92 f 20386.0 0.0   1   0.0 0.0 20385.6, 20385.6 -1.21
BXD92 m 20741.0 0.0   1   0.0 0.0 20740.6, 20740.6 -1.54
BXD96 f 29652.0 1319.0   5 590.0 0.0445 28168.8, 31764.4 -0.48
BXD96 m 26961.0 7008.0   5 3134.0 0.2599 17342.2, 33248.8 -0.91
BXD97 f 28724.0 13251.0   5 5926.0 0.4613 11471.8, 48527.4 -0.55
BXD97 m 25969.0 4257.0   4 2128.0 0.1639 21124.6, 30574.4 -1.01
BXD98 f 28351.0 9663.0   2   6833.0 0.3408 21517.8, 35183.6 -0.58
BXD98 m 31514.0 10962.0   4 5481.0 0.3478 17583.2, 43317.8 -0.45
C57BL/6J f 94970.0 77839.0   5 34811.0 0.8196 43157.8, 232451.6 4.68
C57BL/6J m 58411.0 19139.0   5 8559.0 0.3277 34687.6, 78665.0 2.27
DBA/2J f 31048.0 13487.0   5 6032.0 0.4344 16421.2, 50029.4 -0.37
DBA/2J m 26846.0 10640.0   5 4758.0 0.3963 18053.4, 45351.4 -0.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100 f 32415.56 6074.7746 44364.0601 20467.0599
BXD100 m 36106.4 6074.7746 48054.9001 24157.8999
BXD101 f 29335.6 7842.5003 44761.0474 13910.1526
BXD101 m 33222.15 6791.8045 46580.9793 19863.3207
BXD102 f 38018.72 6074.7746 49967.2201 26070.2199
BXD102 m 34942.24 6074.7746 46890.7401 22993.7399
BXD11 f 40092.32 6074.7746 52040.8201 28143.8199
BXD11 m 34748.24 6074.7746 46696.7401 22799.7399
BXD13 f 31261.2 6074.7746 43209.7001 19312.6999
BXD13 m 28767.44 6074.7746 40715.9401 16818.9399
BXD14 f 33043.72 6074.7746 44992.2201 21095.2199
BXD14 m 43619.72 6074.7746 55568.2201 31671.2199
BXD15 f 23208.16 6074.7746 35156.6601 11259.6599
BXD15 m 21866.16 6074.7746 33814.6601 9917.6599
BXD16 f 34755.16 6074.7746 46703.6601 22806.6599
BXD16 m 35944.76 6074.7746 47893.2601 23996.2599
BXD2 f 38420.08 6074.7746 50368.5801 26471.5799
BXD2 m 43358.28 6074.7746 55306.7801 31409.7799
BXD21 f 47187.0 6074.7746 59135.5001 35238.4999
BXD21 m 37383.4667 5545.4851 48290.9051 26476.0282
BXD27 f 29022.24 6074.7746 40970.7401 17073.7399
BXD27 m 39005.32 6074.7746 50953.8201 27056.8199
BXD28 f 43250.52 6074.7746 55199.0201 31302.0199
BXD28 m 40988.24 6074.7746 52936.7401 29039.7399
BXD31 f 27577.76 6074.7746 39526.2601 15629.2599
BXD31 m 31419.15 6791.8045 44777.9793 18060.3207
BXD32 f 23240.08 6074.7746 35188.5801 11291.5799
BXD32 m 21099.04 6074.7746 33047.5401 9150.5399
BXD39 f 37951.16 6074.7746 49899.6601 26002.6599
BXD39 m 37035.64 6074.7746 48984.1401 25087.1399
BXD40 f 35907.88 6074.7746 47856.3801 23959.3799
BXD40 m 39561.76 6074.7746 51510.2601 27613.2599
BXD42 f 31215.12 6074.7746 43163.6201 19266.6199
BXD42 m 28169.44 6074.7746 40117.9401 16220.9399
BXD43 f 33686.56 6074.7746 45635.0601 21738.0599
BXD43 m 36339.28 6074.7746 48287.7801 24390.7799
BXD44 f 27485.28 6074.7746 39433.7801 15536.7799
BXD44 m 35063.08 6074.7746 47011.5801 23114.5799
BXD48 f 27557.0 6074.7746 39505.5001 15608.4999
BXD48 m 25444.48 6074.7746 37392.9801 13495.9799
BXD49 f 36257.85 6791.8045 49616.6793 22899.0207
BXD49 m 40065.6 6074.7746 52014.1001 28117.0999
BXD50 f 22899.68 6074.7746 34848.1801 10951.1799
BXD50 m 30902.44 6074.7746 42850.9401 18953.9399
BXD51 f 41671.04 6074.7746 53619.5401 29722.5399
BXD51 m 45863.12 6074.7746 57811.6201 33914.6199
BXD6 f 25348.72 6074.7746 37297.2201 13400.2199
BXD6 m 31770.1 6791.8045 45128.9293 18411.2707
BXD61 f 46269.36 6074.7746 58217.8601 34320.8599
BXD61 m 49912.44 6074.7746 61860.9401 37963.9399
BXD62 f 48614.52 6074.7746 60563.0201 36666.0199
BXD62 m 55448.44 6074.7746 67396.9401 43499.9399
BXD65 f 33745.3333 7842.5003 49170.7807 18319.886
BXD65 m 34360.96 6074.7746 46309.4601 22412.4599
BXD66 f 32962.7 9605.062 51854.9375 14070.4625
BXD66 m 42580.2 9605.062 61472.4375 23687.9625
BXD68 f 26464.1 9605.062 45356.3375 7571.8625
BXD68 m 31347.5333 7842.5003 46772.9807 15922.086
BXD69 f 50288.85 6791.8045 63647.6793 36930.0207
BXD69 m 47002.2 6074.7746 58950.7001 35053.6999
BXD70 f 42154.64 6074.7746 54103.1401 30206.1399
BXD70 m 48512.48 6074.7746 60460.9801 36563.9799
BXD73 f 29434.0 6074.7746 41382.5001 17485.4999
BXD73 m 33231.92 6074.7746 45180.4201 21283.4199
BXD75 f 36038.56 6074.7746 47987.0601 24090.0599
BXD75 m 38224.52 6074.7746 50173.0201 26276.0199
BXD77 f 34344.1 9605.062 53236.3375 15451.8625
BXD77 m 23685.7 9605.062 42577.9375 4793.4625
BXD8 f 58851.4 6074.7746 70799.9001 46902.8999
BXD8 m 58040.52 6074.7746 69989.0201 46092.0199
BXD80 f 41369.44 6074.7746 53317.9401 29420.9399
BXD80 m 35208.36 6074.7746 47156.8601 23259.8599
BXD81 f 28846.92 6074.7746 40795.4201 16898.4199
BXD81 m 26594.76 6074.7746 38543.2601 14646.2599
BXD84 f 25220.64 6074.7746 37169.1401 13272.1399
BXD84 m 26570.24 6074.7746 38518.7401 14621.7399
BXD85 f 24941.8 9605.062 43834.0375 6049.5625
BXD85 m 20036.6 9605.062 38928.8375 1144.3625
BXD86 f 19290.52 6074.7746 31239.0201 7342.0199
BXD86 m 25207.45 6791.8045 38566.2793 11848.6207
BXD87 f 27077.44 6074.7746 39025.9401 15128.9399
BXD87 m 31074.76 6074.7746 43023.2601 19126.2599
BXD89 f 48335.56 6074.7746 60284.0601 36387.0599
BXD89 m 44981.96 6074.7746 56930.4601 33033.4599
BXD90 f 45572.9333 7842.5003 60998.3807 30147.486
BXD90 m 43707.5333 7842.5003 59132.9807 28282.086
BXD96 f 29652.04 6074.7746 41600.5401 17703.5399
BXD96 m 26961.44 6074.7746 38909.9401 15012.9399
BXD97 f 28724.44 6074.7746 40672.9401 16775.9399
BXD97 m 25968.9 6791.8045 39327.7293 12610.0707
BXD98 f 28350.7 9605.062 47242.9375 9458.4625
BXD98 m 31514.5 6791.8045 44873.3293 18155.6707
C57BL/6J f 94969.84 6074.7746 106918.3401 83021.3399
C57BL/6J m 58410.92 6074.7746 70359.4201 46462.4199
DBA/2J f 31048.24 6074.7746 42996.7401 19099.7399
DBA/2J m 26846.12 6074.7746 38794.6201 14897.6199


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD100 both 34260.98 4295.5143 42709.8455 25812.1145
BXD101 both 31278.875 5187.3263 41481.8494 21075.9006
BXD102 both 36480.48 4295.5143 44929.3455 28031.6145
BXD11 both 37420.28 4295.5143 45869.1455 28971.4145
BXD13 both 30014.32 4295.5143 38463.1855 21565.4545
BXD14 both 38331.72 4295.5143 46780.5855 29882.8545
BXD15 both 22537.16 4295.5143 30986.0255 14088.2945
BXD16 both 35349.96 4295.5143 43798.8255 26901.0945
BXD2 both 40889.18 4295.5143 49338.0455 32440.3145
BXD21 both 42285.2333 4112.6418 50374.4062 34196.0605
BXD27 both 34013.78 4295.5143 42462.6455 25564.9145
BXD28 both 42119.38 4295.5143 50568.2455 33670.5145
BXD31 both 29498.455 4556.0809 38459.8301 20537.0799
BXD32 both 22169.56 4295.5143 30618.4255 13720.6945
BXD39 both 37493.4 4295.5143 45942.2655 29044.5345
BXD40 both 37734.82 4295.5143 46183.6855 29285.9545
BXD42 both 29692.28 4295.5143 38141.1455 21243.4145
BXD43 both 35012.92 4295.5143 43461.7855 26564.0545
BXD44 both 31274.18 4295.5143 39723.0455 22825.3145
BXD48 both 26500.74 4295.5143 34949.6055 18051.8745
BXD49 both 38161.725 4556.0809 47123.1001 29200.3499
BXD50 both 26901.06 4295.5143 35349.9255 18452.1945
BXD51 both 43767.08 4295.5143 52215.9455 35318.2145
BXD6 both 28559.41 4556.0809 37520.7851 19598.0349
BXD61 both 48090.9 4295.5143 56539.7655 39642.0345
BXD62 both 52031.48 4295.5143 60480.3455 43582.6145
BXD65 both 34053.1467 4960.0327 43809.0562 24297.2372
BXD66 both 37771.45 6791.8045 51130.2793 24412.6207
BXD68 both 28905.8167 6200.0408 41100.7036 16710.9298
BXD69 both 48645.525 4556.0809 57606.9001 39684.1499
BXD70 both 45333.56 4295.5143 53782.4255 36884.6945
BXD73 both 31332.96 4295.5143 39781.8255 22884.0945
BXD75 both 37131.54 4295.5143 45580.4055 28682.6745
BXD77 both 29014.9 6791.8045 42373.7293 15656.0707
BXD8 both 58445.96 4295.5143 66894.8255 49997.0945
BXD80 both 38288.9 4295.5143 46737.7655 29840.0345
BXD81 both 27720.84 4295.5143 36169.7055 19271.9745
BXD84 both 25895.44 4295.5143 34344.3055 17446.5745
BXD85 both 22489.2 6791.8045 35848.0293 9130.3707
BXD86 both 22248.985 4556.0809 31210.3601 13287.6099
BXD87 both 29076.1 4295.5143 37524.9655 20627.2345
BXD89 both 46658.76 4295.5143 55107.6255 38209.8945
BXD90 both 44640.2333 5545.4851 55547.6718 33732.7949
BXD96 both 28306.74 4295.5143 36755.6055 19857.8745
BXD97 both 27346.67 4556.0809 36308.0451 18385.2949
BXD98 both 29932.6 5881.8752 41501.6855 18363.5145
C57BL/6J both 76690.38 4295.5143 85139.2455 68241.5145
DBA/2J both 28947.18 4295.5143 37396.0455 20498.3145




  GWAS USING LINEAR MIXED MODELS