Phenotype measure:   Crusio1   visit_time_d5

ID, description, units MPD:62038   visit_time_d5   mean duration per arm visit (including errors)   [s]  day 5
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
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Crusio1 - mean duration per arm visit (including errors) day 5



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means16.036   s 15.28   s
Median of the strain means14.648   s 13.398   s
SD of the strain means± 6.6771 ± 7.0256
Coefficient of variation (CV)0.4164 0.4598
Min–max range of strain means8.9774   –   47.863   s 8.2857   –   48.381   s
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 65.6652 65.6652 0.2779 0.5982
strain 51 19710.0408 386.4714 1.6356 0.004
sex:strain 51 19019.258 372.9266 1.5782 0.0072
Residuals 796 188088.3854 236.2919


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 18.04 4.6851   2   3.3128 0.2597 14.72727273, 21.35294118 0.3
BXD1 m 10.622 0.0933   2   0.06597 0.0088 10.55555556, 10.6875 -0.66
BXD100 f 22.142 14.701   10 4.649 0.664 9.5625, 59.13333333 0.91
BXD100 m 12.517 3.8843   10 1.2283 0.3103 8.384615385, 19.21428571 -0.39
BXD101 f 47.863 75.5   6 30.822 1.5774 8.428571429, 200.0 4.77
BXD101 m 12.06 3.8763   8 1.3705 0.3214 9.0, 21.0 -0.46
BXD102 f 14.907 5.1197   10 1.619 0.3434 8.466666667, 21.60869565 -0.17
BXD102 m 15.592 7.6904   10 2.4319 0.4932 10.27272727, 35.69230769 0.04
BXD11 f 23.918 14.637   10 4.6285 0.612 5.846153846, 48.0 1.18
BXD11 m 26.003 18.97   10 5.9989 0.7295 7.133333333, 54.7 1.53
BXD13 f 13.259 7.2201   10 2.2832 0.5445 6.210526316, 26.18181818 -0.42
BXD13 m 16.074 13.622   10 4.3077 0.8475 6.48, 53.85714286 0.11
BXD14 f 11.715 3.2029   10 1.0129 0.2734 8.916666667, 18.55555556 -0.65
BXD14 m 14.623 7.1901   10 2.2737 0.4917 8.111111111, 34.22222222 -0.09
BXD15 f 15.935 12.818   10 4.0535 0.8044 7.315789474, 51.08333333 -0.02
BXD15 m 12.111 4.6604   10 1.4738 0.3848 5.5625, 20.25 -0.45
BXD16 f 10.556 2.7448   10 0.868 0.26 8.333333333, 17.92307692 -0.82
BXD16 m 12.055 3.1851   10 1.0072 0.2642 7.3125, 17.18181818 -0.46
BXD18 f 10.688 0.0   1   0.0 0.0 10.6875, 10.6875 -0.8
BXD18 m 8.2857 0.20203   2   0.14286 0.0244 8.142857143, 8.428571429 -1.0
BXD19 f 15.13 1.7746   2   1.2548 0.1173 13.875, 16.38461539 -0.14
BXD19 m 16.667 1.7678   2   1.25 0.1061 15.41666667, 17.91666667 0.2
BXD2 f 9.6792 3.8012   10 1.2021 0.3927 6.625, 17.44444444 -0.95
BXD2 m 15.944 15.426   10 4.8782 0.9675 6.952380952, 59.08333333 0.09
BXD21 f 9.7594 1.7305   10 0.54724 0.1773 5.666666667, 11.86363636 -0.94
BXD21 m 22.187 18.292   8 6.4672 0.8245 9.708333333, 64.88888889 0.98
BXD27 f 24.143 10.92   10 3.4531 0.4523 8.388888889, 41.0 1.21
BXD27 m 14.314 9.6681   10 3.0573 0.6754 7.384615385, 39.2 -0.14
BXD28 f 18.284 12.202   10 3.8587 0.6674 8.933333333, 46.0 0.34
BXD28 m 13.733 5.898   10 1.8651 0.4295 9.055555556, 25.9 -0.22
BXD31 f 16.964 7.479   10 2.3651 0.4409 8.28125, 33.58333333 0.14
BXD31 m 13.17 3.5684   10 1.1284 0.2709 10.28571429, 22.55555556 -0.3
BXD32 f 11.005 4.3763   10 1.3839 0.3977 6.75862069, 19.0 -0.75
BXD32 m 14.398 7.7336   10 2.4456 0.5371 7.333333333, 27.07142857 -0.13
BXD33 f 9.0833 0.0   1   0.0 0.0 9.083333333, 9.083333333 -1.04
BXD33 m 11.2 0.0   1   0.0 0.0 11.2, 11.2 -0.58
BXD34 f 14.306 1.3749   2   0.97222 0.0961 13.33333333, 15.27777778 -0.26
BXD34 m 11.324 1.9464   2   1.3763 0.1719 9.947368421, 12.7 -0.56
BXD39 f 15.248 5.0072   10 1.5834 0.3284 9.909090909, 24.55555556 -0.12
BXD39 m 20.142 7.909   10 2.501 0.3927 10.375, 35.18181818 0.69
BXD40 f 29.584 41.746   10 13.201 1.4111 6.8125, 146.375 2.03
BXD40 m 9.8381 2.0593   10 0.65122 0.2093 6.3, 12.44444444 -0.77
BXD42 f 25.459 17.65   10 5.5815 0.6933 10.85714286, 69.07692308 1.41
BXD42 m 14.856 6.1886   10 1.957 0.4166 9.090909091, 29.8 -0.06
BXD43 f 19.846 10.469   10 3.3104 0.5275 10.64705882, 45.94736842 0.57
BXD43 m 12.957 4.1236   10 1.304 0.3182 7.272727273, 19.66666667 -0.33
BXD44 f 9.648 2.723   10 0.8611 0.2822 6.666666667, 14.33333333 -0.96
BXD44 m 35.836 66.92   10 21.161 1.8673 6.666666667, 225.0 2.93
BXD48 f 11.088 8.1098   10 2.5645 0.7314 5.571428571, 33.4 -0.74
BXD48 m 13.508 4.3368   10 1.3714 0.321 8.857142857, 20.42857143 -0.25
BXD49 f 18.732 12.609   10 3.9873 0.6731 8.6, 51.52380952 0.4
BXD49 m 16.394 7.679   10 2.4283 0.4684 8.888888889, 30.84210526 0.16
BXD50 f 16.254 4.4157   10 1.3964 0.2717 10.0, 24.875 0.03
BXD50 m 10.331 2.0141   10 0.63692 0.195 6.583333333, 13.30769231 -0.7
BXD51 f 21.327 4.6953   10 1.4848 0.2202 15.11111111, 28.92857143 0.79
BXD51 m 17.869 6.0088   10 1.9001 0.3363 11.0, 31.0 0.37
BXD6 f 12.612 3.9187   10 1.2392 0.3107 7.4, 20.0 -0.51
BXD6 m 13.984 7.5115   10 2.3753 0.5372 6.666666667, 32.55555556 -0.18
BXD61 f 28.428 23.444   10 7.4137 0.8247 11.78571429, 91.53846154 1.86
BXD61 m 20.979 7.6706   10 2.4256 0.3656 9.0, 30.38461539 0.81
BXD62 f 14.267 6.2196   10 1.9668 0.436 9.0, 27.6 -0.26
BXD62 m 18.936 11.851   10 3.7476 0.6258 9.384615385, 50.33333333 0.52
BXD65 f 14.944 3.5852   6 1.4636 0.2399 10.4, 18.875 -0.16
BXD65 m 26.588 22.79   10 7.2069 0.8572 11.46153846, 80.0 1.61
BXD66 f 16.377 9.4575   4 4.7287 0.5775 9.333333333, 30.3125 0.05
BXD66 m 12.147 2.3622   4 1.1811 0.1945 9.333333333, 14.85 -0.45
BXD68 f 15.603 5.0152   4 2.5076 0.3214 10.0, 20.75 -0.06
BXD68 m 10.46 0.98622   6 0.40262 0.0943 9.2, 11.81818182 -0.69
BXD69 f 11.633 3.3203   10 1.05 0.2854 7.8, 18.5 -0.66
BXD69 m 18.702 9.3099   10 2.944 0.4978 10.72727273, 35.81818182 0.49
BXD70 f 11.202 5.7958   10 1.8328 0.5174 6.090909091, 25.88888889 -0.72
BXD70 m 10.094 5.6909   10 1.7996 0.5638 6.666666667, 25.6 -0.74
BXD71 m 10.715 0.9171   2   0.64848 0.0856 10.06666667, 11.36363636 -0.65
BXD73 f 9.9082 2.8876   10 0.91313 0.2914 6.769230769, 16.1875 -0.92
BXD73 m 8.4182 1.3928   10 0.44044 0.1655 6.75, 11.06666667 -0.98
BXD75 f 13.899 3.4512   10 1.0914 0.2483 8.333333333, 18.46153846 -0.32
BXD75 m 13.398 3.5805   10 1.1322 0.2672 8.357142857, 18.46153846 -0.27
BXD77 f 13.12 2.8369   4 1.4185 0.2162 9.631578947, 16.11764706 -0.44
BXD77 m 11.237 3.1099   4 1.555 0.2768 8.25, 15.4 -0.58
BXD8 f 14.654 7.8873   10 2.4942 0.5382 7.263157895, 34.375 -0.21
BXD8 m 12.442 3.0462   10 0.96328 0.2448 8.888888889, 17.33333333 -0.4
BXD80 f 20.777 20.283   10 6.4139 0.9762 6.190476191, 73.75 0.71
BXD80 m 8.7937 2.3846   10 0.75407 0.2712 5.75, 12.33333333 -0.92
BXD81 f 11.845 4.8633   10 1.5379 0.4106 6.058823529, 23.88888889 -0.63
BXD81 m 11.786 1.9468   10 0.61564 0.1652 9.285714286, 14.64285714 -0.5
BXD84 f 13.57 5.2255   10 1.6524 0.3851 6.7, 23.84 -0.37
BXD84 m 9.9083 3.2594   10 1.0307 0.329 6.214285714, 17.54545455 -0.76
BXD85 f 15.734 14.136   4 7.068 0.8984 6.25, 36.22222222 -0.05
BXD85 m 16.255 5.6081   4 2.8041 0.345 11.08333333, 24.0 0.14
BXD86 f 24.434 10.531   10 3.3301 0.431 9.5, 40.83333333 1.26
BXD86 m 26.707 12.051   10 3.8108 0.4512 12.25, 46.63636364 1.63
BXD87 f 17.767 7.054   10 2.2307 0.397 12.125, 33.0 0.26
BXD87 m 14.928 4.5782   10 1.4478 0.3067 8.090909091, 22.66666667 -0.05
BXD89 f 8.9774 2.4307   10 0.76864 0.2708 5.875, 13.92307692 -1.06
BXD89 m 12.295 4.8176   10 1.5234 0.3918 7.2, 24.41666667 -0.42
BXD90 f 14.642 7.1196   6 2.9066 0.4862 8.181818182, 28.21428571 -0.21
BXD90 m 48.381 86.57   6 35.342 1.7894 9.875, 225.0 4.71
BXD92 f 13.217 3.1348   2   2.2167 0.2372 11.0, 15.43333333 -0.42
BXD92 m 9.4755 2.3395   3 1.3507 0.2469 8.083333333, 12.17647059 -0.83
BXD96 f 11.027 3.4546   10 1.0924 0.3133 5.52631579, 15.8 -0.75
BXD96 m 10.683 3.5055   10 1.1085 0.3281 5.181818182, 15.68421053 -0.65
BXD97 f 18.456 7.4234   10 2.3475 0.4022 5.227272727, 26.5 0.36
BXD97 m 21.514 32.791   10 10.37 1.5242 8.272727273, 114.6666667 0.89
BXD98 f 10.211 2.3332   6 0.95253 0.2285 7.111111111, 13.63636364 -0.87
BXD98 m 9.4013 3.1505   7 1.1908 0.3351 5.071428571, 13.97368421 -0.84
C57BL/6J f 13.033 2.8394   6 1.1592 0.2179 8.461538462, 16.66666667 -0.45
C57BL/6J m 18.107 9.171   10 2.9001 0.5065 10.38461539, 37.85714286 0.4
DBA/2J f 11.06 3.4882   10 1.1031 0.3154 6.846153846, 17.13636364 -0.75
DBA/2J m 9.4705 2.2805   10 0.72116 0.2408 6.461538462, 13.875 -0.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 18.0401 10.8695 39.3764 -3.2962
BXD1 m 10.6215 10.8695 31.9578 -10.7147
BXD100 f 22.1421 4.861 31.684 12.6002
BXD100 m 12.517 4.861 22.0589 2.9752
BXD101 f 47.8634 6.2755 60.1819 35.5449
BXD101 m 12.0599 5.4347 22.7281 1.3918
BXD102 f 14.9071 4.861 24.4489 5.3652
BXD102 m 15.5918 4.861 25.1337 6.0499
BXD11 f 23.9178 4.861 33.4597 14.3759
BXD11 m 26.0032 4.861 35.545 16.4613
BXD13 f 13.2592 4.861 22.8011 3.7174
BXD13 m 16.0738 4.861 25.6156 6.5319
BXD14 f 11.7149 4.861 21.2568 2.1731
BXD14 m 14.6235 4.861 24.1654 5.0816
BXD15 f 15.9352 4.861 25.477 6.3933
BXD15 m 12.1112 4.861 21.6531 2.5693
BXD16 f 10.5555 4.861 20.0974 1.0136
BXD16 m 12.0551 4.861 21.597 2.5132
BXD19 f 15.1298 10.8695 36.4661 -6.2065
BXD19 m 16.6667 10.8695 38.0029 -4.6696
BXD2 f 9.6792 4.861 19.221 0.1373
BXD2 m 15.944 4.861 25.4859 6.4022
BXD21 f 9.7594 4.861 19.3013 0.2176
BXD21 m 22.187 5.4347 32.8552 11.5189
BXD27 f 24.1425 4.861 33.6844 14.6006
BXD27 m 14.314 4.861 23.8559 4.7721
BXD28 f 18.284 4.861 27.8259 8.7422
BXD28 m 13.7334 4.861 23.2753 4.1916
BXD31 f 16.9643 4.861 26.5062 7.4224
BXD31 m 13.1703 4.861 22.7121 3.6284
BXD32 f 11.0049 4.861 20.5468 1.463
BXD32 m 14.3978 4.861 23.9397 4.8559
BXD34 f 14.3056 10.8695 35.6418 -7.0307
BXD34 m 11.3237 10.8695 32.6599 -10.0126
BXD39 f 15.2477 4.861 24.7895 5.7058
BXD39 m 20.1424 4.861 29.6842 10.6005
BXD40 f 29.5839 4.861 39.1257 20.042
BXD40 m 9.8381 4.861 19.38 0.2963
BXD42 f 25.4592 4.861 35.0011 15.9174
BXD42 m 14.8559 4.861 24.3977 5.314
BXD43 f 19.846 4.861 29.3879 10.3042
BXD43 m 12.9574 4.861 22.4993 3.4155
BXD44 f 9.648 4.861 19.1898 0.1061
BXD44 m 35.8356 4.861 45.3774 26.2937
BXD48 f 11.0883 4.861 20.6302 1.5464
BXD48 m 13.5083 4.861 23.0502 3.9665
BXD49 f 18.7325 4.861 28.2743 9.1906
BXD49 m 16.3942 4.861 25.9361 6.8523
BXD50 f 16.2542 4.861 25.7961 6.7124
BXD50 m 10.3307 4.861 19.8726 0.7888
BXD51 f 21.3272 4.861 30.8691 11.7854
BXD51 m 17.8692 4.861 27.4111 8.3273
BXD6 f 12.6115 4.861 22.1534 3.0697
BXD6 m 13.9837 4.861 23.5256 4.4418
BXD61 f 28.4284 4.861 37.9703 18.8866
BXD61 m 20.9788 4.861 30.5206 11.4369
BXD62 f 14.2666 4.861 23.8084 4.7247
BXD62 m 18.9359 4.861 28.4777 9.394
BXD65 f 14.9437 6.2755 27.2622 2.6252
BXD65 m 26.5875 4.861 36.1294 17.0457
BXD66 f 16.3773 7.6859 31.4643 1.2903
BXD66 m 12.147 7.6859 27.234 -2.94
BXD68 f 15.6027 7.6859 30.6897 0.5157
BXD68 m 10.4601 6.2755 22.7786 -1.8584
BXD69 f 11.6325 4.861 21.1744 2.0907
BXD69 m 18.7015 4.861 28.2434 9.1596
BXD70 f 11.2019 4.861 20.7437 1.66
BXD70 m 10.0943 4.861 19.6362 0.5524
BXD73 f 9.9082 4.861 19.45 0.3663
BXD73 m 8.4182 4.861 17.96 -1.1237
BXD75 f 13.8994 4.861 23.4413 4.3576
BXD75 m 13.3982 4.861 22.9401 3.8564
BXD77 f 13.1196 7.6859 28.2066 -1.9674
BXD77 m 11.2371 7.6859 26.3241 -3.85
BXD8 f 14.654 4.861 24.1958 5.1121
BXD8 m 12.4425 4.861 21.9843 2.9006
BXD80 f 20.7775 4.861 30.3194 11.2356
BXD80 m 8.7937 4.861 18.3356 -0.7481
BXD81 f 11.845 4.861 21.3869 2.3032
BXD81 m 11.786 4.861 21.3279 2.2441
BXD84 f 13.57 4.861 23.1119 4.0282
BXD84 m 9.9083 4.861 19.4502 0.3664
BXD85 f 15.7342 7.6859 30.8212 0.6472
BXD85 m 16.2545 7.6859 31.3415 1.1675
BXD86 f 24.4338 4.861 33.9757 14.8919
BXD86 m 26.7067 4.861 36.2486 17.1648
BXD87 f 17.7666 4.861 27.3085 8.2247
BXD87 m 14.9285 4.861 24.4703 5.3866
BXD89 f 8.9774 4.861 18.5192 -0.5645
BXD89 m 12.2948 4.861 21.8367 2.753
BXD90 f 14.6419 6.2755 26.9604 2.3234
BXD90 m 48.3808 6.2755 60.6993 36.0623
BXD92 f 13.2167 10.8695 34.5529 -8.1196
BXD92 m 9.4755 8.8749 26.8965 -7.9455
BXD96 f 11.0272 4.861 20.569 1.4853
BXD96 m 10.6835 4.861 20.2254 1.1416
BXD97 f 18.4559 4.861 27.9978 8.914
BXD97 m 21.5137 4.861 31.0556 11.9718
BXD98 f 10.2114 6.2755 22.5299 -2.1071
BXD98 m 9.4013 5.81 20.806 -2.0034
C57BL/6J f 13.0333 6.2755 25.3518 0.7148
C57BL/6J m 18.1068 4.861 27.6487 8.565
DBA/2J f 11.06 4.861 20.6019 1.5181
DBA/2J m 9.4705 4.861 19.0123 -0.0714


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 14.3308 7.6859 29.4178 -0.7562
BXD100 both 17.3296 3.4372 24.0767 10.5825
BXD101 both 29.9617 4.1509 38.1096 21.8137
BXD102 both 15.2494 3.4372 21.9965 8.5023
BXD11 both 24.9605 3.4372 31.7076 18.2134
BXD13 both 14.6665 3.4372 21.4136 7.9194
BXD14 both 13.1692 3.4372 19.9163 6.4221
BXD15 both 14.0232 3.4372 20.7703 7.2761
BXD16 both 11.3053 3.4372 18.0524 4.5582
BXD19 both 15.8982 7.6859 30.9853 0.8112
BXD2 both 12.8116 3.4372 19.5587 6.0645
BXD21 both 15.9732 3.6457 23.1296 8.8168
BXD27 both 19.2282 3.4372 25.9754 12.4811
BXD28 both 16.0087 3.4372 22.7559 9.2616
BXD31 both 15.0673 3.4372 21.8144 8.3202
BXD32 both 12.7013 3.4372 19.4485 5.9542
BXD34 both 12.8146 7.6859 27.9016 -2.2724
BXD39 both 17.695 3.4372 24.4421 10.9479
BXD40 both 19.711 3.4372 26.4581 12.9639
BXD42 both 20.1576 3.4372 26.9047 13.4104
BXD43 both 16.4017 3.4372 23.1488 9.6546
BXD44 both 22.7418 3.4372 29.4889 15.9946
BXD48 both 12.2983 3.4372 19.0454 5.5512
BXD49 both 17.5633 3.4372 24.3105 10.8162
BXD50 both 13.2925 3.4372 20.0396 6.5453
BXD51 both 19.5982 3.4372 26.3453 12.8511
BXD6 both 13.2976 3.4372 20.0447 6.5505
BXD61 both 24.7036 3.4372 31.4507 17.9565
BXD62 both 16.6012 3.4372 23.3483 9.8541
BXD65 both 20.7656 3.969 28.5565 12.9747
BXD66 both 14.2621 5.4347 24.9303 3.594
BXD68 both 13.0314 4.9612 22.77 3.2928
BXD69 both 15.167 3.4372 21.9141 8.4199
BXD70 both 10.6481 3.4372 17.3952 3.901
BXD73 both 9.1632 3.4372 15.9103 2.416
BXD75 both 13.6488 3.4372 20.396 6.9017
BXD77 both 12.1783 5.4347 22.8465 1.5102
BXD8 both 13.5482 3.4372 20.2953 6.8011
BXD80 both 14.7856 3.4372 21.5327 8.0385
BXD81 both 11.8155 3.4372 18.5626 5.0684
BXD84 both 11.7392 3.4372 18.4863 4.9921
BXD85 both 15.9944 5.4347 26.6625 5.3262
BXD86 both 25.5703 3.4372 32.3174 18.8231
BXD87 both 16.3475 3.4372 23.0947 9.6004
BXD89 both 10.6361 3.4372 17.3832 3.889
BXD90 both 31.5113 4.4375 40.2218 22.8008
BXD92 both 11.3461 7.0162 25.1186 -2.4264
BXD96 both 10.8553 3.4372 17.6025 4.1082
BXD97 both 19.9848 3.4372 26.7319 13.2377
BXD98 both 9.8064 4.276 18.2 1.4127
C57BL/6J both 15.5701 3.969 23.361 7.7792
DBA/2J both 10.2652 3.4372 17.0124 3.5181




  GWAS USING LINEAR MIXED MODELS