Phenotype measure:   Crusio1   visit_time_d4

ID, description, units MPD:62037   visit_time_d4   mean duration per arm visit (including errors)   [s]  day 4
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
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Crusio1 - mean duration per arm visit (including errors) day 4



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means20.03   s 18.316   s
Median of the strain means18.887   s 15.946   s
SD of the strain means± 8.5802 ± 7.7606
Coefficient of variation (CV)0.4284 0.4237
Min–max range of strain means9.5638   –   45.756   s 9.1463   –   47.122   s
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 462.353 462.353 1.5617 0.2118
strain 51 41588.9169 815.469 2.7544 < 0.0001
sex:strain 51 21239.1853 416.4546 1.4067 0.0348
Residuals 796 235663.5206 296.0597


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 17.163 0.12238   2   0.08654 0.0071 17.07692308, 17.25 -0.33
BXD1 m 9.5897 1.7768   2   1.2564 0.1853 8.333333333, 10.84615385 -1.12
BXD100 f 25.917 23.723   10 7.5019 0.9153 8.9, 90.4 0.69
BXD100 m 19.356 7.4706   10 2.3624 0.386 11.41666667, 36.75 0.13
BXD101 f 13.338 3.2161   6 1.313 0.2411 9.9, 18.41666667 -0.78
BXD101 m 11.126 0.89999   8 0.3182 0.0809 9.5, 12.52941177 -0.93
BXD102 f 14.956 6.1037   10 1.9302 0.4081 7.238095238, 27.71428571 -0.59
BXD102 m 42.901 61.26   10 19.371 1.4278 10.33333333, 200.0 3.17
BXD11 f 30.1 19.625   10 6.2059 0.652 9.333333333, 74.6 1.17
BXD11 m 47.122 51.38   10 16.246 1.0903 8.642857143, 180.0 3.71
BXD13 f 23.58 20.869   10 6.5994 0.885 8.333333333, 76.46153846 0.41
BXD13 m 26.095 18.163   10 5.7437 0.696 5.730769231, 64.18181818 1.0
BXD14 f 15.08 7.9607   10 2.5174 0.5279 9.272727273, 30.0 -0.58
BXD14 m 14.646 3.0932   10 0.97817 0.2112 10.33333333, 22.08333333 -0.47
BXD15 f 17.462 6.3663   10 2.0132 0.3646 8.764705882, 25.0 -0.3
BXD15 m 15.34 4.515   10 1.4278 0.2943 10.63636364, 24.5 -0.38
BXD16 f 10.781 1.8675   10 0.59057 0.1732 7.5, 14.5 -1.08
BXD16 m 20.325 13.862   10 4.3837 0.682 7.588235294, 48.88888889 0.26
BXD18 f 10.6 0.0   1   0.0 0.0 10.6, 10.6 -1.1
BXD18 m 9.9808 0.67991   2   0.48077 0.0681 9.5, 10.46153846 -1.07
BXD19 f 13.667 1.8856   2   1.3333 0.138 12.33333333, 15.0 -0.74
BXD19 m 26.293 5.5569   2   3.9293 0.2113 22.36363636, 30.22222222 1.03
BXD2 f 9.5638 1.8365   10 0.58075 0.192 7.363636364, 12.625 -1.22
BXD2 m 15.946 14.179   10 4.4839 0.8892 6.5, 55.78571429 -0.31
BXD21 f 12.464 2.25   10 0.71152 0.1805 9.1, 15.93333333 -0.88
BXD21 m 11.886 2.7671   8 0.97833 0.2328 8.833333333, 17.5483871 -0.83
BXD27 f 30.645 29.122   10 9.2091 0.9503 9.466666667, 109.9166667 1.24
BXD27 m 14.46 7.8298   10 2.476 0.5415 7.25, 29.4 -0.5
BXD28 f 21.15 12.695   10 4.0146 0.6003 9.952380952, 50.375 0.13
BXD28 m 17.56 9.3693   10 2.9628 0.5336 9.454545455, 37.90909091 -0.1
BXD31 f 20.125 12.484   10 3.9477 0.6203 10.3, 53.0 0.01
BXD31 m 14.254 2.5069   10 0.79274 0.1759 9.708333333, 18.28571429 -0.52
BXD32 f 11.226 2.4491   10 0.77449 0.2182 8.0, 16.11111111 -1.03
BXD32 m 17.221 8.8967   10 2.8134 0.5166 10.2, 34.43478261 -0.14
BXD33 f 9.5789 0.0   1   0.0 0.0 9.578947368, 9.578947368 -1.22
BXD33 m 12.0 0.0   1   0.0 0.0 12.0, 12.0 -0.81
BXD34 f 23.956 5.7869   2   4.092 0.2416 19.86363636, 28.04761905 0.46
BXD34 m 11.769 0.32636   2   0.23077 0.0277 11.53846154, 12.0 -0.84
BXD39 f 28.313 19.872   10 6.2842 0.7019 9.357142857, 73.66666667 0.97
BXD39 m 22.466 9.7965   10 3.0979 0.4361 11.66666667, 43.72727273 0.53
BXD40 f 45.756 48.366   10 15.295 1.057 7.739130435, 161.0 3.0
BXD40 m 14.102 6.0473   10 1.9123 0.4288 8.333333333, 23.91666667 -0.54
BXD42 f 40.807 65.13   10 20.597 1.5961 9.055555556, 225.0 2.42
BXD42 m 21.643 15.09   10 4.7718 0.6972 11.38461539, 63.59090909 0.43
BXD43 f 22.519 13.706   10 4.3341 0.6086 11.125, 49.42857143 0.29
BXD43 m 17.444 8.1156   10 2.5664 0.4652 7.5, 32.45454546 -0.11
BXD44 f 12.88 4.8396   10 1.5304 0.3757 8.933333333, 23.28571429 -0.83
BXD44 m 17.014 9.491   10 3.0013 0.5578 8.714285714, 39.625 -0.17
BXD48 f 11.009 3.3433   10 1.0572 0.3037 7.692307692, 17.3 -1.05
BXD48 m 14.639 11.314   10 3.5779 0.7729 8.583333333, 46.26666667 -0.47
BXD49 f 23.625 11.904   10 3.7643 0.5039 9.0, 45.25 0.42
BXD49 m 23.883 11.659   10 3.6869 0.4882 10.11111111, 42.69230769 0.72
BXD50 f 18.057 8.7676   10 2.7726 0.4855 8.933333333, 35.2 -0.23
BXD50 m 15.703 9.921   10 3.1373 0.6318 7.272727273, 41.5 -0.34
BXD51 f 24.394 9.0777   10 2.8706 0.3721 15.57142857, 38.0 0.51
BXD51 m 23.681 6.872   10 2.1731 0.2902 15.7, 35.54545455 0.69
BXD6 f 19.06 9.3405   10 2.9537 0.4901 10.76923077, 35.2 -0.11
BXD6 m 15.462 8.9539   10 2.8315 0.5791 7.666666667, 37.77777778 -0.37
BXD61 f 39.177 26.982   10 8.5324 0.6887 15.8, 101.1818182 2.23
BXD61 m 22.325 10.811   10 3.4188 0.4843 9.909090909, 38.71428571 0.52
BXD62 f 18.715 12.078   10 3.8193 0.6454 8.615384615, 49.21428571 -0.15
BXD62 m 23.484 10.665   10 3.3727 0.4542 11.33333333, 39.375 0.67
BXD65 f 19.238 7.1723   6 2.9281 0.3728 11.2, 32.33333333 -0.09
BXD65 m 26.978 21.873   10 6.9168 0.8108 11.7, 82.41666667 1.12
BXD66 f 21.605 9.4567   4 4.7284 0.4377 15.58333333, 35.66666667 0.18
BXD66 m 16.259 3.4965   4 1.7482 0.215 12.92, 21.06896552 -0.27
BXD68 f 28.277 11.899   4 5.9493 0.4208 17.2, 39.07692308 0.96
BXD68 m 16.929 5.8909   6 2.4049 0.348 9.666666667, 23.94117647 -0.18
BXD69 f 18.652 9.8426   10 3.1125 0.5277 8.28125, 38.07692308 -0.16
BXD69 m 36.935 45.796   10 14.482 1.2399 9.5, 163.6363636 2.4
BXD70 f 10.291 2.32   10 0.73366 0.2254 6.909090909, 15.5 -1.14
BXD70 m 9.1463 1.6872   10 0.53355 0.1845 7.625, 12.04761905 -1.18
BXD71 m 10.39 0.45794   2   0.32381 0.0441 10.06666667, 10.71428571 -1.02
BXD73 f 15.693 7.9528   10 2.5149 0.5068 8.15, 30.91666667 -0.51
BXD73 m 10.337 3.1042   10 0.98162 0.3003 6.764705882, 16.8 -1.03
BXD75 f 19.327 8.2442   10 2.607 0.4266 10.58333333, 31.9 -0.08
BXD75 m 17.769 6.8011   10 2.1507 0.3828 9.5, 30.4 -0.07
BXD77 f 12.763 0.82696   4 0.41348 0.0648 11.61538462, 13.4 -0.85
BXD77 m 15.208 3.8778   4 1.9389 0.255 10.88888889, 20.28571429 -0.4
BXD8 f 24.085 19.424   10 6.1425 0.8065 8.125, 72.22222222 0.47
BXD8 m 20.76 10.139   10 3.2063 0.4884 10.85714286, 40.35714286 0.31
BXD80 f 19.37 12.553   10 3.9694 0.648 6.684210526, 39.2 -0.08
BXD80 m 13.613 9.0812   10 2.8717 0.6671 7.736842105, 37.08333333 -0.61
BXD81 f 14.168 6.8474   10 2.1653 0.4833 8.636363636, 31.15384615 -0.68
BXD81 m 14.595 5.7874   10 1.8301 0.3965 8.875, 27.1875 -0.48
BXD84 f 20.065 7.6385   10 2.4155 0.3807 11.33333333, 32.63636364 0.0
BXD84 m 14.739 11.033   10 3.4889 0.7486 6.9, 44.2 -0.46
BXD85 f 24.643 14.958   4 7.4789 0.607 13.07692308, 44.73333333 0.54
BXD85 m 19.211 6.3596   4 3.1798 0.331 13.9, 27.35714286 0.12
BXD86 f 35.124 19.603   10 6.1991 0.5581 11.23529412, 75.0 1.76
BXD86 m 29.001 14.277   10 4.5147 0.4923 11.61904762, 63.5 1.38
BXD87 f 39.38 22.707   10 7.1806 0.5766 17.26666667, 77.33333333 2.26
BXD87 m 24.545 9.2285   10 2.9183 0.376 11.875, 44.13333333 0.8
BXD89 f 10.837 2.6362   10 0.83365 0.2433 6.666666667, 15.53846154 -1.07
BXD89 m 12.842 3.6627   10 1.1583 0.2852 9.666666667, 19.2 -0.71
BXD90 f 17.402 5.2835   6 2.157 0.3036 12.38461539, 26.07142857 -0.31
BXD90 m 14.451 6.8748   6 2.8066 0.4757 8.086956522, 24.46666667 -0.5
BXD92 f 14.917 6.0104   2   4.25 0.4029 10.66666667, 19.16666667 -0.6
BXD92 m 10.947 2.4325   3 1.4044 0.2222 8.285714286, 13.05555556 -0.95
BXD96 f 12.801 4.5685   10 1.4447 0.3569 8.764705882, 22.1 -0.84
BXD96 m 10.742 3.0305   10 0.95833 0.2821 6.5, 14.96428571 -0.98
BXD97 f 19.726 7.91   10 2.5014 0.401 7.3125, 30.09090909 -0.04
BXD97 m 24.445 22.398   10 7.0829 0.9163 9.826086957, 83.14285714 0.79
BXD98 f 12.422 4.5124   6 1.8422 0.3633 7.75, 19.3 -0.89
BXD98 m 11.715 2.961   7 1.1192 0.2528 8.555555556, 17.38461539 -0.85
C57BL/6J f 24.106 15.568   6 6.3557 0.6458 10.75, 49.93333333 0.48
C57BL/6J m 22.059 14.312   10 4.526 0.6488 8.823529412, 49.44444444 0.48
DBA/2J f 11.064 3.2126   10 1.0159 0.2904 7.846153846, 17.21428571 -1.04
DBA/2J m 14.059 5.9976   10 1.8966 0.4266 6.884615385, 24.41666667 -0.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 17.1635 12.1668 41.0462 -6.7192
BXD1 m 9.5897 12.1668 33.4725 -14.293
BXD100 f 25.9173 5.4411 36.5979 15.2366
BXD100 m 19.3559 5.4411 30.0366 8.6752
BXD101 f 13.3376 7.0245 27.1263 -0.4511
BXD101 m 11.1264 6.0834 23.0677 -0.815
BXD102 f 14.956 5.4411 25.6367 4.2753
BXD102 m 42.9007 5.4411 53.5814 32.2201
BXD11 f 30.0997 5.4411 40.7803 19.419
BXD11 m 47.1215 5.4411 57.8022 36.4409
BXD13 f 23.5802 5.4411 34.2609 12.8995
BXD13 m 26.0952 5.4411 36.7759 15.4145
BXD14 f 15.0796 5.4411 25.7603 4.399
BXD14 m 14.6463 5.4411 25.327 3.9656
BXD15 f 17.4618 5.4411 28.1425 6.7812
BXD15 m 15.3403 5.4411 26.021 4.6597
BXD16 f 10.7808 5.4411 21.4614 0.1001
BXD16 m 20.3249 5.4411 31.0056 9.6442
BXD19 f 13.6667 12.1668 37.5494 -10.216
BXD19 m 26.2929 12.1668 50.1756 2.4102
BXD2 f 9.5638 5.4411 20.2445 -1.1169
BXD2 m 15.9455 5.4411 26.6262 5.2649
BXD21 f 12.464 5.4411 23.1447 1.7833
BXD21 m 11.8861 6.0834 23.8275 -0.0552
BXD27 f 30.6446 5.4411 41.3253 19.9639
BXD27 m 14.4598 5.4411 25.1405 3.7791
BXD28 f 21.1497 5.4411 31.8304 10.4691
BXD28 m 17.5602 5.4411 28.2409 6.8795
BXD31 f 20.1248 5.4411 30.8054 9.4441
BXD31 m 14.2545 5.4411 24.9352 3.5738
BXD32 f 11.2259 5.4411 21.9066 0.5453
BXD32 m 17.2211 5.4411 27.9017 6.5404
BXD34 f 23.9556 12.1668 47.8383 0.0729
BXD34 m 11.7692 12.1668 35.6519 -12.1135
BXD39 f 28.3131 5.4411 38.9938 17.6325
BXD39 m 22.4662 5.4411 33.1469 11.7855
BXD40 f 45.756 5.4411 56.4367 35.0753
BXD40 m 14.1019 5.4411 24.7825 3.4212
BXD42 f 40.8071 5.4411 51.4877 30.1264
BXD42 m 21.6434 5.4411 32.3241 10.9628
BXD43 f 22.5195 5.4411 33.2001 11.8388
BXD43 m 17.4442 5.4411 28.1248 6.7635
BXD44 f 12.8805 5.4411 23.5611 2.1998
BXD44 m 17.0141 5.4411 27.6948 6.3335
BXD48 f 11.0088 5.4411 21.6894 0.3281
BXD48 m 14.6389 5.4411 25.3196 3.9583
BXD49 f 23.6254 5.4411 34.306 12.9447
BXD49 m 23.8831 5.4411 34.5638 13.2025
BXD50 f 18.0571 5.4411 28.7378 7.3764
BXD50 m 15.7031 5.4411 26.3837 5.0224
BXD51 f 24.3944 5.4411 35.0751 13.7137
BXD51 m 23.681 5.4411 34.3617 13.0004
BXD6 f 19.0602 5.4411 29.7408 8.3795
BXD6 m 15.462 5.4411 26.1426 4.7813
BXD61 f 39.1774 5.4411 49.8581 28.4968
BXD61 m 22.3248 5.4411 33.0054 11.6441
BXD62 f 18.7148 5.4411 29.3955 8.0341
BXD62 m 23.4839 5.4411 34.1646 12.8032
BXD65 f 19.238 7.0245 33.0267 5.4493
BXD65 m 26.9781 5.4411 37.6587 16.2974
BXD66 f 21.6054 8.6032 38.493 4.7178
BXD66 m 16.2591 8.6032 33.1468 -0.6285
BXD68 f 28.2775 8.6032 45.1651 11.3898
BXD68 m 16.9288 7.0245 30.7175 3.1401
BXD69 f 18.6524 5.4411 29.3331 7.9717
BXD69 m 36.9346 5.4411 47.6152 26.2539
BXD70 f 10.2911 5.4411 20.9718 -0.3896
BXD70 m 9.1463 5.4411 19.827 -1.5344
BXD73 f 15.6926 5.4411 26.3733 5.012
BXD73 m 10.3367 5.4411 21.0173 -0.344
BXD75 f 19.3268 5.4411 30.0074 8.6461
BXD75 m 17.7689 5.4411 28.4495 7.0882
BXD77 f 12.7631 8.6032 29.6507 -4.1245
BXD77 m 15.2075 8.6032 32.0952 -1.6801
BXD8 f 24.0853 5.4411 34.7659 13.4046
BXD8 m 20.7605 5.4411 31.4412 10.0798
BXD80 f 19.37 5.4411 30.0507 8.6893
BXD80 m 13.6127 5.4411 24.2933 2.932
BXD81 f 14.1681 5.4411 24.8488 3.4874
BXD81 m 14.5952 5.4411 25.2759 3.9145
BXD84 f 20.0655 5.4411 30.7462 9.3848
BXD84 m 14.7388 5.4411 25.4195 4.0581
BXD85 f 24.6435 8.6032 41.5311 7.7558
BXD85 m 19.2112 8.6032 36.0988 2.3236
BXD86 f 35.1239 5.4411 45.8045 24.4432
BXD86 m 29.0009 5.4411 39.6815 18.3202
BXD87 f 39.3801 5.4411 50.0607 28.6994
BXD87 m 24.5455 5.4411 35.2261 13.8648
BXD89 f 10.8366 5.4411 21.5173 0.1559
BXD89 m 12.8417 5.4411 23.5224 2.1611
BXD90 f 17.4018 7.0245 31.1905 3.6131
BXD90 m 14.4507 7.0245 28.2394 0.662
BXD92 f 14.9167 12.1668 38.7994 -8.966
BXD92 m 10.9471 9.9341 30.4472 -8.5531
BXD96 f 12.8011 5.4411 23.4818 2.1204
BXD96 m 10.7425 5.4411 21.4232 0.0618
BXD97 f 19.7259 5.4411 30.4066 9.0453
BXD97 m 24.445 5.4411 35.1257 13.7643
BXD98 f 12.4219 7.0245 26.2106 -1.3668
BXD98 m 11.7149 6.5034 24.4807 -1.0509
C57BL/6J f 24.1062 7.0245 37.8949 10.3175
C57BL/6J m 22.0591 5.4411 32.7397 11.3784
DBA/2J f 11.064 5.4411 21.7447 0.3833
DBA/2J m 14.0593 5.4411 24.74 3.3787


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 13.3766 8.6032 30.2642 -3.511
BXD100 both 22.6366 3.8475 30.189 15.0842
BXD101 both 12.232 4.6463 21.3524 3.1116
BXD102 both 28.9284 3.8475 36.4808 21.376
BXD11 both 38.6106 3.8475 46.163 31.0582
BXD13 both 24.8377 3.8475 32.3901 17.2853
BXD14 both 14.863 3.8475 22.4153 7.3106
BXD15 both 16.4011 3.8475 23.9535 8.8487
BXD16 both 15.5528 3.8475 23.1052 8.0005
BXD19 both 19.9798 8.6032 36.8674 3.0922
BXD2 both 12.7547 3.8475 20.307 5.2023
BXD21 both 12.1751 4.0809 20.1856 4.1646
BXD27 both 22.5522 3.8475 30.1046 14.9998
BXD28 both 19.355 3.8475 26.9073 11.8026
BXD31 both 17.1896 3.8475 24.742 9.6373
BXD32 both 14.2235 3.8475 21.7759 6.6711
BXD34 both 17.8624 8.6032 34.7501 0.9748
BXD39 both 25.3897 3.8475 32.942 17.8373
BXD40 both 29.9289 3.8475 37.4813 22.3766
BXD42 both 31.2253 3.8475 38.7776 23.6729
BXD43 both 19.9818 3.8475 27.5342 12.4294
BXD44 both 14.9473 3.8475 22.4997 7.3949
BXD48 both 12.8239 3.8475 20.3762 5.2715
BXD49 both 23.7543 3.8475 31.3066 16.2019
BXD50 both 16.8801 3.8475 24.4325 9.3277
BXD51 both 24.0377 3.8475 31.5901 16.4854
BXD6 both 17.2611 3.8475 24.8134 9.7087
BXD61 both 30.7511 3.8475 38.3035 23.1987
BXD62 both 21.0994 3.8475 28.6517 13.547
BXD65 both 23.108 4.4427 31.8288 14.3873
BXD66 both 18.9323 6.0834 30.8736 6.9909
BXD68 both 22.6031 5.5533 33.5041 11.7022
BXD69 both 27.7935 3.8475 35.3458 20.2411
BXD70 both 9.7187 3.8475 17.2711 2.1663
BXD73 both 13.0146 3.8475 20.567 5.4623
BXD75 both 18.5478 3.8475 26.1002 10.9954
BXD77 both 13.9853 6.0834 25.9267 2.044
BXD8 both 22.4229 3.8475 29.9752 14.8705
BXD80 both 16.4913 3.8475 24.0437 8.939
BXD81 both 14.3817 3.8475 21.934 6.8293
BXD84 both 17.4022 3.8475 24.9545 9.8498
BXD85 both 21.9273 6.0834 33.8687 9.986
BXD86 both 32.0624 3.8475 39.6147 24.51
BXD87 both 31.9628 3.8475 39.5151 24.4104
BXD89 both 11.8392 3.8475 19.3915 4.2868
BXD90 both 15.9262 4.9671 25.6763 6.1761
BXD92 both 12.9319 7.8536 28.3481 -2.4843
BXD96 both 11.7718 3.8475 19.3242 4.2194
BXD97 both 22.0855 3.8475 29.6378 14.5331
BXD98 both 12.0684 4.7864 21.4638 2.673
C57BL/6J both 23.0826 4.4427 31.8034 14.3619
DBA/2J both 12.5617 3.8475 20.114 5.0093




  GWAS USING LINEAR MIXED MODELS