Phenotype measure:   Crusio1   visit_time_d3

ID, description, units MPD:62036   visit_time_d3   mean duration per arm visit (including errors)   [s]  day 3
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
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Crusio1 - mean duration per arm visit (including errors) day 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means22.272   s 20.509   s
Median of the strain means21.312   s 17.798   s
SD of the strain means± 8.5442 ± 9.5518
Coefficient of variation (CV)0.3836 0.4657
Min–max range of strain means10.3   –   52.05   s 10.435   –   67.93   s
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 324.5435 324.5435 1.3618 0.2436
strain 51 55786.6965 1093.8568 4.5898 < 0.0001
sex:strain 51 22044.2514 432.2402 1.8137 0.0006
Residuals 796 189705.2692 238.3232


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 24.308 2.2918   2   1.6205 0.0943 22.6875, 25.92857143 0.24
BXD1 m 12.697 6.303   2   4.4569 0.4964 8.24, 17.15384615 -0.82
BXD100 f 28.202 15.432   10 4.8799 0.5472 17.35294118, 69.1 0.69
BXD100 m 18.455 5.9557   10 1.8834 0.3227 7.833333333, 31.0 -0.22
BXD101 f 23.446 18.393   6 7.5088 0.7845 11.57575758, 60.4375 0.14
BXD101 m 14.227 5.7416   8 2.0299 0.4036 7.352941177, 25.18181818 -0.66
BXD102 f 20.097 15.566   10 4.9225 0.7745 8.444444444, 62.52631579 -0.25
BXD102 m 17.652 6.2152   10 1.9654 0.3521 11.11764706, 28.84615385 -0.3
BXD11 f 34.325 18.632   10 5.8921 0.5428 9.909090909, 73.2 1.41
BXD11 m 67.93 47.566   10 15.042 0.7002 16.2, 150.0 4.96
BXD13 f 26.671 16.266   10 5.1438 0.6099 10.05555556, 59.09090909 0.51
BXD13 m 32.703 24.444   10 7.7297 0.7474 7.608695652, 78.81818182 1.28
BXD14 f 15.344 7.596   10 2.4021 0.495 10.03030303, 34.57575758 -0.81
BXD14 m 15.114 9.3704   10 2.9632 0.62 9.7, 41.44444444 -0.56
BXD15 f 23.096 11.316   10 3.5784 0.4899 8.909090909, 42.0 0.1
BXD15 m 17.708 9.0052   10 2.8477 0.5085 9.060606061, 40.76470588 -0.29
BXD16 f 11.776 1.8166   10 0.57447 0.1543 8.952380952, 15.45454546 -1.23
BXD16 m 23.716 20.629   10 6.5236 0.8699 8.0625, 77.0 0.34
BXD18 f 10.3 0.0   1   0.0 0.0 10.3, 10.3 -1.4
BXD18 m 10.435 2.1082   2   1.4907 0.202 8.944444444, 11.92592593 -1.05
BXD19 f 27.115 8.3221   2   5.8846 0.3069 21.23076923, 33.0 0.57
BXD19 m 18.0 2.9463   2   2.0833 0.1637 15.91666667, 20.08333333 -0.26
BXD2 f 11.876 2.1984   10 0.6952 0.1851 8.076923077, 15.94117647 -1.22
BXD2 m 13.418 5.9644   10 1.8861 0.4445 8.842105263, 26.42857143 -0.74
BXD21 f 16.229 4.9015   10 1.55 0.302 10.33333333, 23.4 -0.71
BXD21 m 17.798 6.108   8 2.1595 0.3432 8.733333333, 24.59259259 -0.28
BXD27 f 32.872 20.583   10 6.5088 0.6261 10.91666667, 83.57142857 1.24
BXD27 m 23.524 16.421   10 5.1928 0.6981 10.54545455, 60.72727273 0.32
BXD28 f 23.351 13.332   10 4.216 0.571 8.5, 46.69230769 0.13
BXD28 m 22.134 11.142   10 3.5233 0.5034 11.22222222, 42.09090909 0.17
BXD31 f 22.827 12.86   10 4.0668 0.5634 10.4, 51.6 0.06
BXD31 m 16.201 2.5103   10 0.79383 0.1549 12.57142857, 20.73333333 -0.45
BXD32 f 11.447 1.9477   10 0.61591 0.1701 8.538461539, 15.25 -1.27
BXD32 m 18.651 11.656   10 3.6861 0.625 8.619047619, 45.86666667 -0.19
BXD33 f 11.571 0.0   1   0.0 0.0 11.57142857, 11.57142857 -1.25
BXD33 m 13.267 0.0   1   0.0 0.0 13.26666667, 13.26666667 -0.76
BXD34 f 22.008 0.12964   2   0.09167 0.0059 21.91666667, 22.1 -0.03
BXD34 m 14.682 6.6211   2   4.6818 0.451 10.0, 19.36363636 -0.61
BXD39 f 35.881 21.627   10 6.839 0.6027 10.44444444, 76.91666667 1.59
BXD39 m 33.033 10.594   10 3.3502 0.3207 23.73333333, 55.8 1.31
BXD40 f 40.993 28.819   10 9.1133 0.703 9.611111111, 85.63636364 2.19
BXD40 m 14.352 3.8137   10 1.206 0.2657 9.842105263, 22.21428571 -0.64
BXD42 f 24.655 13.333   10 4.2164 0.5408 12.44444444, 53.0 0.28
BXD42 m 19.825 13.361   10 4.2251 0.674 10.85714286, 56.33333333 -0.07
BXD43 f 26.907 15.514   10 4.9059 0.5766 12.23076923, 61.63636364 0.54
BXD43 m 18.97 6.5296   10 2.0648 0.3442 9.80952381, 31.4 -0.16
BXD44 f 18.614 8.8315   10 2.7928 0.4745 11.0, 38.69230769 -0.43
BXD44 m 23.622 11.174   10 3.5335 0.473 11.38461539, 46.2 0.33
BXD48 f 17.229 15.423   10 4.8773 0.8952 8.555555556, 59.36363636 -0.59
BXD48 m 14.85 5.5857   10 1.7664 0.3762 9.391304348, 29.29166667 -0.59
BXD49 f 22.665 11.176   10 3.5343 0.4931 9.115384615, 43.55555556 0.05
BXD49 m 17.616 5.4504   10 1.7236 0.3094 11.85714286, 26.77777778 -0.3
BXD50 f 20.002 8.6677   10 2.741 0.4333 8.3125, 38.25 -0.27
BXD50 m 18.276 7.6798   10 2.4286 0.4202 9.6, 32.27272727 -0.23
BXD51 f 21.655 5.9254   10 1.8738 0.2736 15.34482759, 34.9 -0.07
BXD51 m 23.597 6.938   10 2.194 0.294 15.2, 36.69230769 0.32
BXD6 f 18.535 11.228   10 3.5506 0.6058 9.227272727, 46.3125 -0.44
BXD6 m 22.975 11.415   10 3.6097 0.4968 10.53333333, 44.0 0.26
BXD61 f 52.05 35.96   10 11.371 0.6909 12.1, 121.5384615 3.49
BXD61 m 25.972 12.946   10 4.0937 0.4984 11.125, 41.77777778 0.57
BXD62 f 26.809 18.579   10 5.8752 0.693 12.9, 71.71428571 0.53
BXD62 m 26.371 13.976   10 4.4196 0.53 11.2, 50.5 0.61
BXD65 f 17.441 5.0132   6 2.0466 0.2874 11.30434783, 23.8 -0.57
BXD65 m 30.341 35.176   10 11.124 1.1594 10.0, 126.0 1.03
BXD66 f 24.65 8.6677   4 4.3339 0.3516 17.5, 36.75862069 0.28
BXD66 m 15.336 2.1318   4 1.0659 0.139 13.4, 18.31578947 -0.54
BXD68 f 20.122 5.0287   4 2.5144 0.2499 13.75, 25.3255814 -0.25
BXD68 m 18.078 4.3692   6 1.7837 0.2417 14.35294118, 24.22222222 -0.25
BXD69 f 20.969 9.3789   10 2.9659 0.4473 9.0, 36.1 -0.15
BXD69 m 43.972 63.98   10 20.233 1.455 11.75, 225.0 2.46
BXD70 f 13.645 7.7406   10 2.4478 0.5673 8.384615385, 34.92307692 -1.01
BXD70 m 12.055 3.6167   10 1.1437 0.3 7.818181818, 19.92307692 -0.89
BXD71 m 13.139 0.03928   2   0.02778 0.003 13.11111111, 13.16666667 -0.77
BXD73 f 20.584 8.5914   10 2.7168 0.4174 9.1875, 33.83333333 -0.2
BXD73 m 11.885 3.7645   10 1.1904 0.3167 8.0, 19.0 -0.9
BXD75 f 22.55 11.073   10 3.5017 0.491 10.66666667, 48.5 0.03
BXD75 m 28.03 16.01   10 5.0629 0.5712 11.65, 66.6 0.79
BXD77 f 13.599 3.3746   4 1.6873 0.2481 9.888888889, 18.0 -1.02
BXD77 m 13.352 2.0342   4 1.0171 0.1523 11.33333333, 15.53846154 -0.75
BXD8 f 32.016 20.224   10 6.3954 0.6317 11.17647059, 72.3 1.14
BXD8 m 25.349 8.8997   10 2.8143 0.3511 16.11764706, 41.38888889 0.51
BXD80 f 27.641 24.846   10 7.8571 0.8989 7.2, 85.9 0.63
BXD80 m 14.792 6.981   10 2.2076 0.4719 8.0, 31.15384615 -0.6
BXD81 f 15.507 6.0366   10 1.9089 0.3893 8.461538462, 26.0 -0.79
BXD81 m 15.239 4.1385   10 1.3087 0.2716 9.533333333, 23.66666667 -0.55
BXD84 f 16.2 8.867   10 2.804 0.5474 9.625, 36.45454546 -0.71
BXD84 m 16.741 11.046   10 3.493 0.6598 8.25, 46.59090909 -0.39
BXD85 f 28.075 17.671   4 8.8355 0.6294 12.94444444, 48.7 0.68
BXD85 m 25.714 12.902   4 6.4508 0.5017 14.81818182, 44.26666667 0.54
BXD86 f 36.98 17.161   10 5.4268 0.4641 10.13333333, 69.61538462 1.72
BXD86 m 35.628 14.806   10 4.682 0.4156 18.0, 67.63636364 1.58
BXD87 f 34.148 15.006   10 4.7455 0.4395 18.4, 69.46153846 1.39
BXD87 m 29.154 9.3719   10 2.9637 0.3215 12.70588235, 41.0952381 0.91
BXD89 f 10.898 2.7498   10 0.86956 0.2523 6.75, 14.22727273 -1.33
BXD89 m 13.898 3.3973   10 1.0743 0.2444 10.4, 19.92857143 -0.69
BXD90 f 19.594 6.4894   6 2.6493 0.3312 11.76923077, 28.375 -0.31
BXD90 m 15.069 4.4971   6 1.836 0.2984 8.46875, 20.56521739 -0.57
BXD92 f 12.967 0.51854   2   0.36667 0.04 12.6, 13.33333333 -1.09
BXD92 m 12.9 3.1761   3 1.8337 0.2462 10.8125, 16.55555556 -0.8
BXD96 f 16.58 11.884   10 3.7579 0.7167 8.333333333, 48.75 -0.67
BXD96 m 12.779 5.2751   10 1.6681 0.4128 7.388888889, 25.8 -0.81
BXD97 f 17.514 6.4896   10 2.0522 0.3705 8.324324324, 26.61538462 -0.56
BXD97 m 24.838 19.349   10 6.1187 0.779 10.81818182, 66.91666667 0.45
BXD98 f 14.625 4.1113   6 1.6784 0.2811 8.708333333, 20.125 -0.9
BXD98 m 12.154 3.3594   7 1.2697 0.2764 7.375, 16.75 -0.87
C57BL/6J f 31.579 17.482   6 7.1369 0.5536 9.142857143, 55.55555556 1.09
C57BL/6J m 25.131 12.488   10 3.9492 0.4969 10.2, 49.0952381 0.48
DBA/2J f 11.971 4.1934   10 1.3261 0.3503 7.846153846, 20.28571429 -1.21
DBA/2J m 14.677 7.08   10 2.2389 0.4824 7.826086957, 29.1 -0.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 24.308 10.9161 45.7358 2.8803
BXD1 m 12.6969 10.9161 34.1247 -8.7309
BXD100 f 28.2016 4.8818 37.7844 18.6188
BXD100 m 18.4553 4.8818 28.0381 8.8725
BXD101 f 23.4457 6.3024 35.817 11.0744
BXD101 m 14.2271 5.4581 24.9409 3.5132
BXD102 f 20.0972 4.8818 29.68 10.5144
BXD102 m 17.6519 4.8818 27.2347 8.0691
BXD11 f 34.3246 4.8818 43.9074 24.7418
BXD11 m 67.929 4.8818 77.5118 58.3462
BXD13 f 26.6707 4.8818 36.2535 17.0879
BXD13 m 32.7027 4.8818 42.2854 23.1199
BXD14 f 15.3439 4.8818 24.9267 5.7611
BXD14 m 15.1139 4.8818 24.6967 5.5311
BXD15 f 23.0965 4.8818 32.6793 13.5137
BXD15 m 17.7078 4.8818 27.2906 8.125
BXD16 f 11.7756 4.8818 21.3584 2.1928
BXD16 m 23.7159 4.8818 33.2987 14.1331
BXD19 f 27.1154 10.9161 48.5432 5.6876
BXD19 m 18.0 10.9161 39.4278 -3.4278
BXD2 f 11.8762 4.8818 21.459 2.2934
BXD2 m 13.4185 4.8818 23.0013 3.8357
BXD21 f 16.2286 4.8818 25.8114 6.6458
BXD21 m 17.7975 5.4581 28.5114 7.0837
BXD27 f 32.8724 4.8818 42.4552 23.2896
BXD27 m 23.5236 4.8818 33.1064 13.9408
BXD28 f 23.3509 4.8818 32.9337 13.7681
BXD28 m 22.1338 4.8818 31.7166 12.551
BXD31 f 22.827 4.8818 32.4098 13.2442
BXD31 m 16.2011 4.8818 25.7839 6.6183
BXD32 f 11.447 4.8818 21.0298 1.8642
BXD32 m 18.6508 4.8818 28.2336 9.0681
BXD34 f 22.0083 10.9161 43.4361 0.5806
BXD34 m 14.6818 10.9161 36.1096 -6.746
BXD39 f 35.8809 4.8818 45.4637 26.2981
BXD39 m 33.0325 4.8818 42.6153 23.4497
BXD40 f 40.9934 4.8818 50.5762 31.4106
BXD40 m 14.3517 4.8818 23.9345 4.7689
BXD42 f 24.655 4.8818 34.2378 15.0723
BXD42 m 19.8247 4.8818 29.4075 10.2419
BXD43 f 26.9067 4.8818 36.4895 17.3239
BXD43 m 18.9702 4.8818 28.553 9.3874
BXD44 f 18.6136 4.8818 28.1964 9.0308
BXD44 m 23.6216 4.8818 33.2044 14.0389
BXD48 f 17.2287 4.8818 26.8115 7.6459
BXD48 m 14.8497 4.8818 24.4325 5.2669
BXD49 f 22.6654 4.8818 32.2482 13.0826
BXD49 m 17.6161 4.8818 27.1989 8.0333
BXD50 f 20.002 4.8818 29.5848 10.4192
BXD50 m 18.2763 4.8818 27.8591 8.6935
BXD51 f 21.6545 4.8818 31.2373 12.0717
BXD51 m 23.597 4.8818 33.1798 14.0142
BXD6 f 18.5352 4.8818 28.118 8.9524
BXD6 m 22.9746 4.8818 32.5574 13.3918
BXD61 f 52.0468 4.8818 61.6296 42.464
BXD61 m 25.9721 4.8818 35.5549 16.3893
BXD62 f 26.8091 4.8818 36.3919 17.2263
BXD62 m 26.3712 4.8818 35.9539 16.7884
BXD65 f 17.4407 6.3024 29.812 5.0693
BXD65 m 30.3406 4.8818 39.9234 20.7578
BXD66 f 24.6499 7.7189 39.8017 9.4982
BXD66 m 15.3358 7.7189 30.4875 0.1841
BXD68 f 20.1219 7.7189 35.2736 4.9702
BXD68 m 18.0782 6.3024 30.4495 5.7069
BXD69 f 20.9695 4.8818 30.5523 11.3867
BXD69 m 43.9719 4.8818 53.5547 34.3891
BXD70 f 13.6451 4.8818 23.2279 4.0623
BXD70 m 12.0548 4.8818 21.6376 2.472
BXD73 f 20.5835 4.8818 30.1663 11.0007
BXD73 m 11.8855 4.8818 21.4683 2.3027
BXD75 f 22.5504 4.8818 32.1332 12.9676
BXD75 m 28.0299 4.8818 37.6127 18.4471
BXD77 f 13.5994 7.7189 28.7511 -1.5523
BXD77 m 13.3523 7.7189 28.504 -1.7994
BXD8 f 32.016 4.8818 41.5988 22.4332
BXD8 m 25.3487 4.8818 34.9315 15.7659
BXD80 f 27.6409 4.8818 37.2237 18.0581
BXD80 m 14.7924 4.8818 24.3752 5.2096
BXD81 f 15.5067 4.8818 25.0895 5.9239
BXD81 m 15.2393 4.8818 24.8221 5.6565
BXD84 f 16.1998 4.8818 25.7826 6.617
BXD84 m 16.7407 4.8818 26.3235 7.1579
BXD85 f 28.0745 7.7189 43.2262 12.9228
BXD85 m 25.7135 7.7189 40.8652 10.5618
BXD86 f 36.9797 4.8818 46.5625 27.3969
BXD86 m 35.6285 4.8818 45.2113 26.0457
BXD87 f 34.1476 4.8818 43.7304 24.5648
BXD87 m 29.1541 4.8818 38.7369 19.5713
BXD89 f 10.8976 4.8818 20.4804 1.3148
BXD89 m 13.8983 4.8818 23.4811 4.3155
BXD90 f 19.5942 6.3024 31.9656 7.2229
BXD90 m 15.0688 6.3024 27.4401 2.6975
BXD92 f 12.9667 10.9161 34.3944 -8.4611
BXD92 m 12.9005 8.913 30.3962 -4.5952
BXD96 f 16.5802 4.8818 26.163 6.9974
BXD96 m 12.7794 4.8818 22.3622 3.1966
BXD97 f 17.5141 4.8818 27.0969 7.9313
BXD97 m 24.8383 4.8818 34.4211 15.2555
BXD98 f 14.625 6.3024 26.9963 2.2537
BXD98 m 12.1545 5.8349 23.6081 0.7009
C57BL/6J f 31.579 6.3024 43.9503 19.2077
C57BL/6J m 25.1307 4.8818 34.7135 15.5479
DBA/2J f 11.9713 4.8818 21.5541 2.3885
DBA/2J m 14.6774 4.8818 24.2602 5.0946


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 18.5025 7.7189 33.6542 3.3508
BXD100 both 23.3284 3.452 30.1045 16.5524
BXD101 both 18.8364 4.1687 27.0192 10.6535
BXD102 both 18.8745 3.452 25.6506 12.0985
BXD11 both 51.1268 3.452 57.9029 44.3507
BXD13 both 29.6867 3.452 36.4627 22.9106
BXD14 both 15.2289 3.452 22.0049 8.4528
BXD15 both 20.4021 3.452 27.1782 13.6261
BXD16 both 17.7458 3.452 24.5218 10.9697
BXD19 both 22.5577 7.7189 37.7094 7.406
BXD2 both 12.6473 3.452 19.4234 5.8713
BXD21 both 17.0131 3.6614 24.2002 9.826
BXD27 both 28.198 3.452 34.974 21.4219
BXD28 both 22.7423 3.452 29.5184 15.9663
BXD31 both 19.514 3.452 26.2901 12.738
BXD32 both 15.0489 3.452 21.825 8.2729
BXD34 both 18.3451 7.7189 33.4968 3.1933
BXD39 both 34.4567 3.452 41.2328 27.6807
BXD40 both 27.6726 3.452 34.4486 20.8965
BXD42 both 22.2399 3.452 29.0159 15.4638
BXD43 both 22.9385 3.452 29.7145 16.1624
BXD44 both 21.1176 3.452 27.8937 14.3416
BXD48 both 16.0392 3.452 22.8152 9.2631
BXD49 both 20.1408 3.452 26.9168 13.3647
BXD50 both 19.1391 3.452 25.9152 12.3631
BXD51 both 22.6257 3.452 29.4018 15.8497
BXD6 both 20.7549 3.452 27.5309 13.9788
BXD61 both 39.0094 3.452 45.7855 32.2334
BXD62 both 26.5901 3.452 33.3662 19.8141
BXD65 both 23.8906 3.986 31.7149 16.0663
BXD66 both 19.9929 5.4581 30.7068 9.279
BXD68 both 19.1001 4.9825 28.8805 9.3197
BXD69 both 32.4707 3.452 39.2467 25.6946
BXD70 both 12.85 3.452 19.626 6.0739
BXD73 both 16.2345 3.452 23.0106 9.4584
BXD75 both 25.2901 3.452 32.0662 18.5141
BXD77 both 13.4759 5.4581 24.1898 2.762
BXD8 both 28.6824 3.452 35.4584 21.9063
BXD80 both 21.2166 3.452 27.9927 14.4406
BXD81 both 15.373 3.452 22.1491 8.597
BXD84 both 16.4703 3.452 23.2463 9.6942
BXD85 both 26.894 5.4581 37.6079 16.1801
BXD86 both 36.3041 3.452 43.0802 29.528
BXD87 both 31.6509 3.452 38.4269 24.8748
BXD89 both 12.3979 3.452 19.174 5.6219
BXD90 both 17.3315 4.4565 26.0794 8.5837
BXD92 both 12.9336 7.0463 26.7651 -0.898
BXD96 both 14.6798 3.452 21.4559 7.9038
BXD97 both 21.1762 3.452 27.9523 14.4001
BXD98 both 13.3897 4.2944 21.8194 4.9601
C57BL/6J both 28.3549 3.986 36.1792 20.5306
DBA/2J both 13.3244 3.452 20.1004 6.5483




  GWAS USING LINEAR MIXED MODELS