Project measure / variable:   Crusio1   num_arms_adj_d5

ID, description, units MPD:62028   num_arms_adj_d5   number of different arms visited during first 8 arm choices of a trial minus 5.3 (number expected by chance)   [n]  day 5  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
Ontology mappings

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  STRAIN COMPARISON PLOT
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Crusio1 - number of different arms visited during first 8 arm choices of a trial minus 5.3 (number expected by chance) day 5



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means0.60432   n 0.57483   n
Median of the strain means0.6   n 0.6   n
SD of the strain means± 0.38599 ± 0.33263
Coefficient of variation (CV)0.6387 0.5787
Min–max range of strain means-0.3   –   1.3   n -0.4   –   1.2   n
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.2425 0.2425 0.2893 0.5908
strain 51 67.1464 1.3166 1.5704 0.0078
sex:strain 51 31.8578 0.6247 0.7451 0.9063
Residuals 796 667.3488 0.8384


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 1.2 0.70711   2   0.5 0.5893 0.7, 1.7 1.54
BXD1 m 0.2 0.70711   2   0.5 3.5355 -0.3, 0.7 -1.13
BXD100 f 0.9 0.91894   10 0.29059 1.021 -1.3, 1.7 0.77
BXD100 m 0.7 0.4714   10 0.14907 0.6734 -0.3, 1.7 0.38
BXD101 f 0.86667 1.3292   6 0.54263 1.5336 -1.3, 2.7 0.68
BXD101 m -0.05 0.88641   8 0.31339 -17.7281 -1.3, 0.7 -1.88
BXD102 f 0.2 0.97183   10 0.30732 4.8591 -1.3, 1.7 -1.05
BXD102 m 0.3 0.84327   10 0.26667 2.8109 -1.3, 1.7 -0.83
BXD11 f 0.7 0.8165   10 0.2582 1.1664 -0.3, 1.7 0.25
BXD11 m 1.0 1.0593   10 0.335 1.0593 -1.3, 2.7 1.28
BXD13 f 0.6 0.99443   10 0.31447 1.6574 -1.3, 1.7 -0.01
BXD13 m 0.6 0.73786   10 0.23333 1.2298 -0.3, 1.7 0.08
BXD14 f 0.9 0.63246   10 0.2 0.7027 -0.3, 1.7 0.77
BXD14 m 0.8 0.8756   10 0.27689 1.0945 -0.3, 1.7 0.68
BXD15 f 0.7 0.66667   10 0.21082 0.9524 -0.3, 1.7 0.25
BXD15 m 0.4 1.2517   10 0.39581 3.1292 -1.3, 2.7 -0.53
BXD16 f 0.2 0.84984   10 0.26874 4.2492 -1.3, 1.7 -1.05
BXD16 m 0.3 0.96609   10 0.30551 3.2203 -1.3, 1.7 -0.83
BXD18 f -0.3 0.0   1   0.0 0.0 -0.3, -0.3 -2.34
BXD18 m 0.7 1.4142   2   1.0 2.0203 -0.3, 1.7 0.38
BXD19 f 0.7 1.4142   2   1.0 2.0203 -0.3, 1.7 0.25
BXD19 m 0.2 0.70711   2   0.5 3.5355 -0.3, 0.7 -1.13
BXD2 f 0.2 1.2693   10 0.40139 6.3465 -1.3, 2.7 -1.05
BXD2 m -0.4 0.99443   10 0.31447 -2.4861 -2.3, 1.7 -2.93
BXD21 f 0.3 1.3499   10 0.42687 4.4997 -2.3, 2.7 -0.79
BXD21 m 0.825 1.2464   8 0.44068 1.5108 -1.3, 2.7 0.75
BXD27 f 0.4 1.0593   10 0.335 2.6484 -0.3, 2.7 -0.53
BXD27 m 0.4 1.0593   10 0.335 2.6484 -1.3, 1.7 -0.53
BXD28 f 0.6 0.8756   10 0.27689 1.4593 -1.3, 1.7 -0.01
BXD28 m 0.3 0.96609   10 0.30551 3.2203 -1.3, 1.7 -0.83
BXD31 f 0.6 0.73786   10 0.23333 1.2298 -0.3, 1.7 -0.01
BXD31 m 0.6 0.99443   10 0.31447 1.6574 -0.3, 2.7 0.08
BXD32 f 0.1 0.84327   10 0.26667 8.4327 -1.3, 1.7 -1.31
BXD32 m 0.4 0.67495   10 0.21344 1.6874 -0.3, 1.7 -0.53
BXD33 f -0.3 0.0   1   0.0 0.0 -0.3, -0.3 -2.34
BXD33 m 0.7 0.0   1   0.0 0.0 0.7, 0.7 0.38
BXD34 f 1.2 0.70711   2   0.5 0.5893 0.7, 1.7 1.54
BXD34 m 0.7 1.4142   2   1.0 2.0203 -0.3, 1.7 0.38
BXD39 f 0.6 0.73786   10 0.23333 1.2298 -0.3, 1.7 -0.01
BXD39 m 0.7 0.66667   10 0.21082 0.9524 -0.3, 1.7 0.38
BXD40 f 0.8 0.99443   10 0.31447 1.243 -0.3, 2.7 0.51
BXD40 m 0.7 1.0541   10 0.33333 1.5058 -1.3, 1.7 0.38
BXD42 f 0.4 0.94868   10 0.3 2.3717 -1.3, 1.7 -0.53
BXD42 m 0.4 0.67495   10 0.21344 1.6874 -0.3, 1.7 -0.53
BXD43 f 0.5 0.63246   10 0.2 1.2649 -0.3, 1.7 -0.27
BXD43 m 0.4 1.2517   10 0.39581 3.1292 -1.3, 2.7 -0.53
BXD44 f 0.8 0.73786   10 0.23333 0.9223 -0.3, 1.7 0.51
BXD44 m 0.7 1.3333   10 0.42164 1.9048 -1.3, 2.7 0.38
BXD48 f 1.1 0.69921   10 0.22111 0.6356 0.7, 2.7 1.28
BXD48 m 0.6 0.8756   10 0.27689 1.4593 -0.3, 1.7 0.08
BXD49 f 0.3 0.84327   10 0.26667 2.8109 -1.3, 1.7 -0.79
BXD49 m 1.1 1.075   10 0.33993 0.9772 -0.3, 2.7 1.58
BXD50 f 0.4 0.82327   10 0.26034 2.0582 -1.3, 1.7 -0.53
BXD50 m 0.4 1.0593   10 0.335 2.6484 -1.3, 1.7 -0.53
BXD51 f 0.9 1.0328   10 0.3266 1.1476 -0.3, 2.7 0.77
BXD51 m 1.0 1.1595   10 0.36667 1.1595 -0.3, 2.7 1.28
BXD6 f 0.7 1.0541   10 0.33333 1.5058 -1.3, 1.7 0.25
BXD6 m 0.8 0.56765   10 0.17951 0.7096 -0.3, 1.7 0.68
BXD61 f 0.7 0.94281   10 0.29814 1.3469 -1.3, 1.7 0.25
BXD61 m 1.0 0.82327   10 0.26034 0.8233 -0.3, 2.7 1.28
BXD62 f 0.9 0.78881   10 0.24944 0.8765 -0.3, 2.7 0.77
BXD62 m 1.2 0.84984   10 0.26874 0.7082 -0.3, 2.7 1.88
BXD65 f 0.7 0.89443   6 0.36515 1.2778 -0.3, 1.7 0.25
BXD65 m 0.6 0.8756   10 0.27689 1.4593 -1.3, 1.7 0.08
BXD66 f 0.45 0.5   4 0.25 1.1111 -0.3, 0.7 -0.4
BXD66 m 0.7 1.4142   4 0.70711 2.0203 -1.3, 1.7 0.38
BXD68 f 0.95 1.5   4 0.75 1.5789 -0.3, 2.7 0.9
BXD68 m 1.2 1.2247   6 0.5 1.0206 -1.3, 1.7 1.88
BXD69 f 0.3 0.69921   10 0.22111 2.3307 -0.3, 1.7 -0.79
BXD69 m 0.4 0.94868   10 0.3 2.3717 -1.3, 1.7 -0.53
BXD70 f 0.4 0.82327   10 0.26034 2.0582 -0.3, 1.7 -0.53
BXD70 m 0.9 0.91894   10 0.29059 1.021 -0.3, 1.7 0.98
BXD71 m 0.7 0.0   2   0.0 0.0 0.7, 0.7 0.38
BXD73 f 0.6 0.8756   10 0.27689 1.4593 -1.3, 1.7 -0.01
BXD73 m 0.3 0.96609   10 0.30551 3.2203 -1.3, 1.7 -0.83
BXD75 f 0.6 1.2867   10 0.40689 2.1445 -1.3, 2.7 -0.01
BXD75 m 0.5 0.63246   10 0.2 1.2649 -0.3, 1.7 -0.22
BXD77 f 0.7 0.8165   4 0.40825 1.1664 -0.3, 1.7 0.25
BXD77 m 0.7 0.8165   4 0.40825 1.1664 -0.3, 1.7 0.38
BXD8 f 1.3 1.075   10 0.33993 0.8269 -0.3, 2.7 1.8
BXD8 m 1.1 0.84327   10 0.26667 0.7666 -0.3, 1.7 1.58
BXD80 f 0.9 0.78881   10 0.24944 0.8765 -0.3, 2.7 0.77
BXD80 m -2.2204460492503132e-17 0.82327   10 0.26034 -3.7076901851613336e+16 -1.3, 0.7 -1.73
BXD81 f 1.0 0.48305   10 0.15275 0.483 0.7, 1.7 1.03
BXD81 m 0.5 0.91894   10 0.29059 1.8379 -1.3, 1.7 -0.22
BXD84 f 0.3 1.1738   10 0.37118 3.9126 -1.3, 1.7 -0.79
BXD84 m 0.8 0.56765   10 0.17951 0.7096 -0.3, 1.7 0.68
BXD85 f 1.2 0.57735   4 0.28868 0.4811 0.7, 1.7 1.54
BXD85 m 0.45 0.95743   4 0.47871 2.1276 -0.3, 1.7 -0.38
BXD86 f 0.9 0.78881   10 0.24944 0.8765 -0.3, 1.7 0.77
BXD86 m 0.6 0.73786   10 0.23333 1.2298 -0.3, 1.7 0.08
BXD87 f 1.2 0.97183   10 0.30732 0.8099 -0.3, 2.7 1.54
BXD87 m 0.9 1.1353   10 0.35901 1.2614 -1.3, 1.7 0.98
BXD89 f 0.5 1.0328   10 0.3266 2.0656 -1.3, 2.7 -0.27
BXD89 m 0.5 0.42164   10 0.13333 0.8433 -0.3, 0.7 -0.22
BXD90 f -0.3 1.0954   6 0.44721 -3.6515 -1.3, 1.7 -2.34
BXD90 m -0.13333 1.169   6 0.47726 -8.7678 -2.3, 0.7 -2.13
BXD92 f 0.2 0.70711   2   0.5 3.5355 -0.3, 0.7 -1.05
BXD92 m 0.36667 0.57735   3 0.33333 1.5746 -0.3, 0.7 -0.63
BXD96 f 0.2 0.70711   10 0.22361 3.5355 -0.3, 1.7 -1.05
BXD96 m 0.7 0.66667   10 0.21082 0.9524 -0.3, 1.7 0.38
BXD97 f 0.2 0.84984   10 0.26874 4.2492 -1.3, 1.7 -1.05
BXD97 m 0.9 0.91894   10 0.29059 1.021 -0.3, 2.7 0.98
BXD98 f 1.2 0.54772   6 0.22361 0.4564 0.7, 1.7 1.54
BXD98 m 0.55714 1.069   7 0.40406 1.9188 -1.3, 1.7 -0.05
C57BL/6J f 0.86667 0.75277   6 0.30732 0.8686 -0.3, 1.7 0.68
C57BL/6J m 0.7 0.66667   10 0.21082 0.9524 -0.3, 1.7 0.38
DBA/2J f 0.4 0.48305   10 0.15275 1.2076 -0.3, 0.7 -0.53
DBA/2J m -3.3306690738754695e-17 0.82327   10 0.26034 -2.4717934567742228e+16 -1.3, 0.7 -1.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 1.2 0.6474 2.4709 -0.0709
BXD1 m 0.2 0.6474 1.4709 -1.0709
BXD100 f 0.9 0.2895 1.4684 0.3316
BXD100 m 0.7 0.2895 1.2684 0.1316
BXD101 f 0.8667 0.3738 1.6004 0.1329
BXD101 m -0.05 0.3237 0.5855 -0.6855
BXD102 f 0.2 0.2895 0.7684 -0.3684
BXD102 m 0.3 0.2895 0.8684 -0.2684
BXD11 f 0.7 0.2895 1.2684 0.1316
BXD11 m 1.0 0.2895 1.5684 0.4316
BXD13 f 0.6 0.2895 1.1684 0.0316
BXD13 m 0.6 0.2895 1.1684 0.0316
BXD14 f 0.9 0.2895 1.4684 0.3316
BXD14 m 0.8 0.2895 1.3684 0.2316
BXD15 f 0.7 0.2895 1.2684 0.1316
BXD15 m 0.4 0.2895 0.9684 -0.1684
BXD16 f 0.2 0.2895 0.7684 -0.3684
BXD16 m 0.3 0.2895 0.8684 -0.2684
BXD19 f 0.7 0.6474 1.9709 -0.5709
BXD19 m 0.2 0.6474 1.4709 -1.0709
BXD2 f 0.2 0.2895 0.7684 -0.3684
BXD2 m -0.4 0.2895 0.1684 -0.9684
BXD21 f 0.3 0.2895 0.8684 -0.2684
BXD21 m 0.825 0.3237 1.4605 0.1895
BXD27 f 0.4 0.2895 0.9684 -0.1684
BXD27 m 0.4 0.2895 0.9684 -0.1684
BXD28 f 0.6 0.2895 1.1684 0.0316
BXD28 m 0.3 0.2895 0.8684 -0.2684
BXD31 f 0.6 0.2895 1.1684 0.0316
BXD31 m 0.6 0.2895 1.1684 0.0316
BXD32 f 0.1 0.2895 0.6684 -0.4684
BXD32 m 0.4 0.2895 0.9684 -0.1684
BXD34 f 1.2 0.6474 2.4709 -0.0709
BXD34 m 0.7 0.6474 1.9709 -0.5709
BXD39 f 0.6 0.2895 1.1684 0.0316
BXD39 m 0.7 0.2895 1.2684 0.1316
BXD40 f 0.8 0.2895 1.3684 0.2316
BXD40 m 0.7 0.2895 1.2684 0.1316
BXD42 f 0.4 0.2895 0.9684 -0.1684
BXD42 m 0.4 0.2895 0.9684 -0.1684
BXD43 f 0.5 0.2895 1.0684 -0.0684
BXD43 m 0.4 0.2895 0.9684 -0.1684
BXD44 f 0.8 0.2895 1.3684 0.2316
BXD44 m 0.7 0.2895 1.2684 0.1316
BXD48 f 1.1 0.2895 1.6684 0.5316
BXD48 m 0.6 0.2895 1.1684 0.0316
BXD49 f 0.3 0.2895 0.8684 -0.2684
BXD49 m 1.1 0.2895 1.6684 0.5316
BXD50 f 0.4 0.2895 0.9684 -0.1684
BXD50 m 0.4 0.2895 0.9684 -0.1684
BXD51 f 0.9 0.2895 1.4684 0.3316
BXD51 m 1.0 0.2895 1.5684 0.4316
BXD6 f 0.7 0.2895 1.2684 0.1316
BXD6 m 0.8 0.2895 1.3684 0.2316
BXD61 f 0.7 0.2895 1.2684 0.1316
BXD61 m 1.0 0.2895 1.5684 0.4316
BXD62 f 0.9 0.2895 1.4684 0.3316
BXD62 m 1.2 0.2895 1.7684 0.6316
BXD65 f 0.7 0.3738 1.4338 -0.0338
BXD65 m 0.6 0.2895 1.1684 0.0316
BXD66 f 0.45 0.4578 1.3487 -0.4487
BXD66 m 0.7 0.4578 1.5987 -0.1987
BXD68 f 0.95 0.4578 1.8487 0.0513
BXD68 m 1.2 0.3738 1.9338 0.4662
BXD69 f 0.3 0.2895 0.8684 -0.2684
BXD69 m 0.4 0.2895 0.9684 -0.1684
BXD70 f 0.4 0.2895 0.9684 -0.1684
BXD70 m 0.9 0.2895 1.4684 0.3316
BXD73 f 0.6 0.2895 1.1684 0.0316
BXD73 m 0.3 0.2895 0.8684 -0.2684
BXD75 f 0.6 0.2895 1.1684 0.0316
BXD75 m 0.5 0.2895 1.0684 -0.0684
BXD77 f 0.7 0.4578 1.5987 -0.1987
BXD77 m 0.7 0.4578 1.5987 -0.1987
BXD8 f 1.3 0.2895 1.8684 0.7316
BXD8 m 1.1 0.2895 1.6684 0.5316
BXD80 f 0.9 0.2895 1.4684 0.3316
BXD80 m 0.0 0.2895 0.5684 -0.5684
BXD81 f 1.0 0.2895 1.5684 0.4316
BXD81 m 0.5 0.2895 1.0684 -0.0684
BXD84 f 0.3 0.2895 0.8684 -0.2684
BXD84 m 0.8 0.2895 1.3684 0.2316
BXD85 f 1.2 0.4578 2.0987 0.3013
BXD85 m 0.45 0.4578 1.3487 -0.4487
BXD86 f 0.9 0.2895 1.4684 0.3316
BXD86 m 0.6 0.2895 1.1684 0.0316
BXD87 f 1.2 0.2895 1.7684 0.6316
BXD87 m 0.9 0.2895 1.4684 0.3316
BXD89 f 0.5 0.2895 1.0684 -0.0684
BXD89 m 0.5 0.2895 1.0684 -0.0684
BXD90 f -0.3 0.3738 0.4338 -1.0338
BXD90 m -0.1333 0.3738 0.6004 -0.8671
BXD92 f 0.2 0.6474 1.4709 -1.0709
BXD92 m 0.3667 0.5286 1.4044 -0.671
BXD96 f 0.2 0.2895 0.7684 -0.3684
BXD96 m 0.7 0.2895 1.2684 0.1316
BXD97 f 0.2 0.2895 0.7684 -0.3684
BXD97 m 0.9 0.2895 1.4684 0.3316
BXD98 f 1.2 0.3738 1.9338 0.4662
BXD98 m 0.5571 0.3461 1.2365 -0.1222
C57BL/6J f 0.8667 0.3738 1.6004 0.1329
C57BL/6J m 0.7 0.2895 1.2684 0.1316
DBA/2J f 0.4 0.2895 0.9684 -0.1684
DBA/2J m 0.0 0.2895 0.5684 -0.5684


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 0.7 0.4578 1.5987 -0.1987
BXD100 both 0.8 0.2047 1.2019 0.3981
BXD101 both 0.4083 0.2472 0.8937 -0.077
BXD102 both 0.25 0.2047 0.6519 -0.1519
BXD11 both 0.85 0.2047 1.2519 0.4481
BXD13 both 0.6 0.2047 1.0019 0.1981
BXD14 both 0.85 0.2047 1.2519 0.4481
BXD15 both 0.55 0.2047 0.9519 0.1481
BXD16 both 0.25 0.2047 0.6519 -0.1519
BXD19 both 0.45 0.4578 1.3487 -0.4487
BXD2 both -0.1 0.2047 0.3019 -0.5019
BXD21 both 0.5625 0.2172 0.9888 0.1362
BXD27 both 0.4 0.2047 0.8019 -0.0019
BXD28 both 0.45 0.2047 0.8519 0.0481
BXD31 both 0.6 0.2047 1.0019 0.1981
BXD32 both 0.25 0.2047 0.6519 -0.1519
BXD34 both 0.95 0.4578 1.8487 0.0513
BXD39 both 0.65 0.2047 1.0519 0.2481
BXD40 both 0.75 0.2047 1.1519 0.3481
BXD42 both 0.4 0.2047 0.8019 -0.0019
BXD43 both 0.45 0.2047 0.8519 0.0481
BXD44 both 0.75 0.2047 1.1519 0.3481
BXD48 both 0.85 0.2047 1.2519 0.4481
BXD49 both 0.7 0.2047 1.1019 0.2981
BXD50 both 0.4 0.2047 0.8019 -0.0019
BXD51 both 0.95 0.2047 1.3519 0.5481
BXD6 both 0.75 0.2047 1.1519 0.3481
BXD61 both 0.85 0.2047 1.2519 0.4481
BXD62 both 1.05 0.2047 1.4519 0.6481
BXD65 both 0.65 0.2364 1.1141 0.1859
BXD66 both 0.575 0.3237 1.2105 -0.0605
BXD68 both 1.075 0.2955 1.6551 0.4949
BXD69 both 0.35 0.2047 0.7519 -0.0519
BXD70 both 0.65 0.2047 1.0519 0.2481
BXD73 both 0.45 0.2047 0.8519 0.0481
BXD75 both 0.55 0.2047 0.9519 0.1481
BXD77 both 0.7 0.3237 1.3355 0.0645
BXD8 both 1.2 0.2047 1.6019 0.7981
BXD80 both 0.45 0.2047 0.8519 0.0481
BXD81 both 0.75 0.2047 1.1519 0.3481
BXD84 both 0.55 0.2047 0.9519 0.1481
BXD85 both 0.825 0.3237 1.4605 0.1895
BXD86 both 0.75 0.2047 1.1519 0.3481
BXD87 both 1.05 0.2047 1.4519 0.6481
BXD89 both 0.5 0.2047 0.9019 0.0981
BXD90 both -0.2167 0.2643 0.3022 -0.7355
BXD92 both 0.2833 0.4179 1.1037 -0.537
BXD96 both 0.45 0.2047 0.8519 0.0481
BXD97 both 0.55 0.2047 0.9519 0.1481
BXD98 both 0.8786 0.2547 1.3785 0.3786
C57BL/6J both 0.7833 0.2364 1.2474 0.3193
DBA/2J both 0.2 0.2047 0.6019 -0.2019




  GWAS USING LINEAR MIXED MODELS