Project measure / variable:   Crusio1   num_arms_adj_d4

ID, description, units MPD:62027   num_arms_adj_d4   number of different arms visited during first 8 arm choices of a trial minus 5.3 (number expected by chance)   [n]  day 4  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
Ontology mappings

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  STRAIN COMPARISON PLOT
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Crusio1 - number of different arms visited during first 8 arm choices of a trial minus 5.3 (number expected by chance) day 4



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means0.53642   n 0.58719   n
Median of the strain means0.56666   n 0.7   n
SD of the strain means± 0.40966 ± 0.42145
Coefficient of variation (CV)0.7637 0.7177
Min–max range of strain means-0.3   –   1.7   n -0.8   –   1.4   n
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.5912 1.5912 1.9702 0.1608
strain 51 82.1493 1.6108 1.9944 0.0001
sex:strain 51 42.2185 0.8278 1.025 0.4282
Residuals 796 642.881 0.8076


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 1.2 0.70711   2   0.5 0.5893 0.7, 1.7 1.62
BXD1 m 0.2 0.70711   2   0.5 3.5355 -0.3, 0.7 -0.92
BXD100 f 0.3 0.5164   10 0.1633 1.7213 -0.3, 0.7 -0.58
BXD100 m 1.2 0.84984   10 0.26874 0.7082 -0.3, 2.7 1.45
BXD101 f 0.53333 0.98319   6 0.40139 1.8435 -1.3, 1.7 -0.01
BXD101 m 0.2 0.53452   8 0.18898 2.6726 -0.3, 0.7 -0.92
BXD102 f 0.0 0.67495   10 0.21344 None -0.3, 1.7 -1.31
BXD102 m -0.4 0.99443   10 0.31447 -2.4861 -2.3, 0.7 -2.34
BXD11 f 0.7 0.66667   10 0.21082 0.9524 -0.3, 1.7 0.4
BXD11 m 0.5 1.2293   10 0.38873 2.4585 -1.3, 2.7 -0.21
BXD13 f 0.6 1.1972   10 0.37859 1.9954 -1.3, 2.7 0.16
BXD13 m 0.4 1.0593   10 0.335 2.6484 -1.3, 1.7 -0.44
BXD14 f 0.6 0.8756   10 0.27689 1.4593 -0.3, 1.7 0.16
BXD14 m 0.2 0.84984   10 0.26874 4.2492 -1.3, 1.7 -0.92
BXD15 f 0.4 1.2517   10 0.39581 3.1292 -1.3, 2.7 -0.33
BXD15 m 1.0 0.82327   10 0.26034 0.8233 -0.3, 2.7 0.98
BXD16 f 4.4408920985006264e-17 1.2517   10 0.39581 2.8185002681266924e+16 -2.3, 1.7 -1.31
BXD16 m 0.7 0.8165   10 0.2582 1.1664 -0.3, 1.7 0.27
BXD18 f 1.7 0.0   1   0.0 0.0 1.7, 1.7 2.84
BXD18 m 0.7 0.0   2   0.0 0.0 0.7, 0.7 0.27
BXD19 f -0.3 1.4142   2   1.0 -4.714 -1.3, 0.7 -2.04
BXD19 m 1.2 0.70711   2   0.5 0.5893 0.7, 1.7 1.45
BXD2 f 0.3 0.69921   10 0.22111 2.3307 -0.3, 1.7 -0.58
BXD2 m 0.4 0.48305   10 0.15275 1.2076 -0.3, 0.7 -0.44
BXD21 f -0.2 0.56765   10 0.17951 -2.8382 -1.3, 0.7 -1.8
BXD21 m -0.8 1.5119   8 0.53452 -1.8898 -3.3, 1.7 -3.29
BXD27 f 0.4 0.94868   10 0.3 2.3717 -0.3, 1.7 -0.33
BXD27 m 0.5 0.78881   10 0.24944 1.5776 -0.3, 1.7 -0.21
BXD28 f 0.4 0.82327   10 0.26034 2.0582 -1.3, 1.7 -0.33
BXD28 m 0.8 0.8756   10 0.27689 1.0945 -0.3, 1.7 0.5
BXD31 f 0.7 0.8165   10 0.2582 1.1664 -0.3, 1.7 0.4
BXD31 m 0.4 0.82327   10 0.26034 2.0582 -1.3, 1.7 -0.44
BXD32 f 0.6 0.8756   10 0.27689 1.4593 -0.3, 1.7 0.16
BXD32 m 0.9 0.78881   10 0.24944 0.8765 -0.3, 1.7 0.74
BXD33 f 0.7 0.0   1   0.0 0.0 0.7, 0.7 0.4
BXD33 m 0.7 0.0   1   0.0 0.0 0.7, 0.7 0.27
BXD34 f 1.2 0.70711   2   0.5 0.5893 0.7, 1.7 1.62
BXD34 m 0.2 2.1213   2   1.5 10.6066 -1.3, 1.7 -0.92
BXD39 f 0.4 1.2517   10 0.39581 3.1292 -2.3, 1.7 -0.33
BXD39 m 0.6 0.73786   10 0.23333 1.2298 -0.3, 1.7 0.03
BXD40 f 0.7 0.66667   10 0.21082 0.9524 -0.3, 1.7 0.4
BXD40 m 0.4 1.1595   10 0.36667 2.8988 -2.3, 1.7 -0.44
BXD42 f 0.3 1.7127   10 0.5416 5.709 -3.3, 2.7 -0.58
BXD42 m 0.2 1.1785   10 0.37268 5.8926 -1.3, 1.7 -0.92
BXD43 f 0.5 0.91894   10 0.29059 1.8379 -0.3, 2.7 -0.09
BXD43 m 0.9 1.0328   10 0.3266 1.1476 -0.3, 2.7 0.74
BXD44 f 0.8 1.1972   10 0.37859 1.4965 -1.3, 2.7 0.64
BXD44 m 1.4 0.82327   10 0.26034 0.5881 -0.3, 2.7 1.93
BXD48 f 0.6 0.56765   10 0.17951 0.9461 -0.3, 1.7 0.16
BXD48 m 1.1 0.5164   10 0.1633 0.4695 0.7, 1.7 1.22
BXD49 f 0.9 1.0328   10 0.3266 1.1476 -1.3, 1.7 0.89
BXD49 m 0.9 1.1353   10 0.35901 1.2614 -1.3, 1.7 0.74
BXD50 f 0.4 0.67495   10 0.21344 1.6874 -0.3, 1.7 -0.33
BXD50 m 1.0 0.82327   10 0.26034 0.8233 -0.3, 2.7 0.98
BXD51 f 0.4 0.82327   10 0.26034 2.0582 -0.3, 1.7 -0.33
BXD51 m 0.9 0.78881   10 0.24944 0.8765 -0.3, 1.7 0.74
BXD6 f 0.2 0.70711   10 0.22361 3.5355 -1.3, 0.7 -0.82
BXD6 m 0.7 0.66667   10 0.21082 0.9524 -0.3, 1.7 0.27
BXD61 f 0.8 0.73786   10 0.23333 0.9223 -0.3, 1.7 0.64
BXD61 m 0.7 0.94281   10 0.29814 1.3469 -1.3, 1.7 0.27
BXD62 f 0.3 0.5164   10 0.1633 1.7213 -0.3, 0.7 -0.58
BXD62 m 1.0 0.67495   10 0.21344 0.6749 -0.3, 1.7 0.98
BXD65 f 1.0333 0.5164   6 0.21082 0.4997 0.7, 1.7 1.21
BXD65 m 0.6 0.73786   10 0.23333 1.2298 -0.3, 1.7 0.03
BXD66 f 0.7 0.8165   4 0.40825 1.1664 -0.3, 1.7 0.4
BXD66 m 0.7 1.4142   4 0.70711 2.0203 -1.3, 1.7 0.27
BXD68 f -0.05 0.95743   4 0.47871 -19.1485 -1.3, 0.7 -1.43
BXD68 m 0.7 1.0954   6 0.44721 1.5649 -1.3, 1.7 0.27
BXD69 f 0.8 0.99443   10 0.31447 1.243 -1.3, 1.7 0.64
BXD69 m 0.6 0.8756   10 0.27689 1.4593 -0.3, 1.7 0.03
BXD70 f -0.2 0.8756   10 0.27689 -4.378 -1.3, 0.7 -1.8
BXD70 m 0.2 0.70711   10 0.22361 3.5355 -1.3, 0.7 -0.92
BXD71 m 1.2 0.70711   2   0.5 0.5893 0.7, 1.7 1.45
BXD73 f 0.8 0.8756   10 0.27689 1.0945 -0.3, 2.7 0.64
BXD73 m 0.3 0.69921   10 0.22111 2.3307 -0.3, 1.7 -0.68
BXD75 f 0.8 0.56765   10 0.17951 0.7096 -0.3, 1.7 0.64
BXD75 m 0.7 0.94281   10 0.29814 1.3469 -0.3, 2.7 0.27
BXD77 f -0.3 0.8165   4 0.40825 -2.7217 -1.3, 0.7 -2.04
BXD77 m 0.7 0.8165   4 0.40825 1.1664 -0.3, 1.7 0.27
BXD8 f 0.8 0.8756   10 0.27689 1.0945 -0.3, 2.7 0.64
BXD8 m 1.0 0.67495   10 0.21344 0.6749 0.7, 2.7 0.98
BXD80 f 0.3 0.84327   10 0.26667 2.8109 -1.3, 1.7 -0.58
BXD80 m 0.1 0.96609   10 0.30551 9.6609 -1.3, 1.7 -1.16
BXD81 f 0.7 1.2472   10 0.39441 1.7817 -1.3, 2.7 0.4
BXD81 m 0.3 0.84327   10 0.26667 2.8109 -1.3, 1.7 -0.68
BXD84 f 1.3 0.5164   10 0.1633 0.3972 0.7, 1.7 1.86
BXD84 m 0.9 0.63246   10 0.2 0.7027 -0.3, 1.7 0.74
BXD85 f 0.45 0.5   4 0.25 1.1111 -0.3, 0.7 -0.21
BXD85 m 0.2 0.57735   4 0.28868 2.8868 -0.3, 0.7 -0.92
BXD86 f 0.5 0.91894   10 0.29059 1.8379 -1.3, 1.7 -0.09
BXD86 m 0.6 0.73786   10 0.23333 1.2298 -0.3, 1.7 0.03
BXD87 f 0.9 0.42164   10 0.13333 0.4685 0.7, 1.7 0.89
BXD87 m 0.8 0.99443   10 0.31447 1.243 -0.3, 2.7 0.5
BXD89 f 0.4 0.94868   10 0.3 2.3717 -1.3, 1.7 -0.33
BXD89 m 0.6 0.8756   10 0.27689 1.4593 -1.3, 1.7 0.03
BXD90 f 0.36667 1.0328   6 0.42164 2.8167 -1.3, 1.7 -0.41
BXD90 m 0.86667 0.98319   6 0.40139 1.1345 -0.3, 2.7 0.66
BXD92 f 1.2 0.70711   2   0.5 0.5893 0.7, 1.7 1.62
BXD92 m -0.3 1.0   3 0.57735 -3.3333 -1.3, 0.7 -2.11
BXD96 f 0.8 0.56765   10 0.17951 0.7096 -0.3, 1.7 0.64
BXD96 m 0.5 1.2293   10 0.38873 2.4585 -1.3, 1.7 -0.21
BXD97 f 0.7 1.1547   10 0.36515 1.6496 -1.3, 2.7 0.4
BXD97 m 0.7 1.0541   10 0.33333 1.5058 -1.3, 1.7 0.27
BXD98 f 0.7 0.63246   6 0.2582 0.9035 -0.3, 1.7 0.4
BXD98 m 1.1286 0.7868   7 0.29738 0.6972 -0.3, 1.7 1.28
C57BL/6J f 0.03333 0.5164   6 0.21082 15.4919 -0.3, 0.7 -1.23
C57BL/6J m -0.1 1.2293   10 0.38873 -12.2927 -2.3, 1.7 -1.63
DBA/2J f 0.1 0.84327   10 0.26667 8.4327 -1.3, 1.7 -1.07
DBA/2J m 0.5 0.42164   10 0.13333 0.8433 -0.3, 0.7 -0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 1.2 0.6355 2.4474 -0.0474
BXD1 m 0.2 0.6355 1.4474 -1.0474
BXD100 f 0.3 0.2842 0.8579 -0.2579
BXD100 m 1.2 0.2842 1.7579 0.6421
BXD101 f 0.5333 0.3669 1.2535 -0.1868
BXD101 m 0.2 0.3177 0.8237 -0.4237
BXD102 f 0.0 0.2842 0.5579 -0.5579
BXD102 m -0.4 0.2842 0.1579 -0.9579
BXD11 f 0.7 0.2842 1.2579 0.1421
BXD11 m 0.5 0.2842 1.0579 -0.0579
BXD13 f 0.6 0.2842 1.1579 0.0421
BXD13 m 0.4 0.2842 0.9579 -0.1579
BXD14 f 0.6 0.2842 1.1579 0.0421
BXD14 m 0.2 0.2842 0.7579 -0.3579
BXD15 f 0.4 0.2842 0.9579 -0.1579
BXD15 m 1.0 0.2842 1.5579 0.4421
BXD16 f 0.0 0.2842 0.5579 -0.5579
BXD16 m 0.7 0.2842 1.2579 0.1421
BXD19 f -0.3 0.6355 0.9474 -1.5474
BXD19 m 1.2 0.6355 2.4474 -0.0474
BXD2 f 0.3 0.2842 0.8579 -0.2579
BXD2 m 0.4 0.2842 0.9579 -0.1579
BXD21 f -0.2 0.2842 0.3579 -0.7579
BXD21 m -0.8 0.3177 -0.1763 -1.4237
BXD27 f 0.4 0.2842 0.9579 -0.1579
BXD27 m 0.5 0.2842 1.0579 -0.0579
BXD28 f 0.4 0.2842 0.9579 -0.1579
BXD28 m 0.8 0.2842 1.3579 0.2421
BXD31 f 0.7 0.2842 1.2579 0.1421
BXD31 m 0.4 0.2842 0.9579 -0.1579
BXD32 f 0.6 0.2842 1.1579 0.0421
BXD32 m 0.9 0.2842 1.4579 0.3421
BXD34 f 1.2 0.6355 2.4474 -0.0474
BXD34 m 0.2 0.6355 1.4474 -1.0474
BXD39 f 0.4 0.2842 0.9579 -0.1579
BXD39 m 0.6 0.2842 1.1579 0.0421
BXD40 f 0.7 0.2842 1.2579 0.1421
BXD40 m 0.4 0.2842 0.9579 -0.1579
BXD42 f 0.3 0.2842 0.8579 -0.2579
BXD42 m 0.2 0.2842 0.7579 -0.3579
BXD43 f 0.5 0.2842 1.0579 -0.0579
BXD43 m 0.9 0.2842 1.4579 0.3421
BXD44 f 0.8 0.2842 1.3579 0.2421
BXD44 m 1.4 0.2842 1.9579 0.8421
BXD48 f 0.6 0.2842 1.1579 0.0421
BXD48 m 1.1 0.2842 1.6579 0.5421
BXD49 f 0.9 0.2842 1.4579 0.3421
BXD49 m 0.9 0.2842 1.4579 0.3421
BXD50 f 0.4 0.2842 0.9579 -0.1579
BXD50 m 1.0 0.2842 1.5579 0.4421
BXD51 f 0.4 0.2842 0.9579 -0.1579
BXD51 m 0.9 0.2842 1.4579 0.3421
BXD6 f 0.2 0.2842 0.7579 -0.3579
BXD6 m 0.7 0.2842 1.2579 0.1421
BXD61 f 0.8 0.2842 1.3579 0.2421
BXD61 m 0.7 0.2842 1.2579 0.1421
BXD62 f 0.3 0.2842 0.8579 -0.2579
BXD62 m 1.0 0.2842 1.5579 0.4421
BXD65 f 1.0333 0.3669 1.7535 0.3132
BXD65 m 0.6 0.2842 1.1579 0.0421
BXD66 f 0.7 0.4493 1.582 -0.182
BXD66 m 0.7 0.4493 1.582 -0.182
BXD68 f -0.05 0.4493 0.832 -0.932
BXD68 m 0.7 0.3669 1.4202 -0.0202
BXD69 f 0.8 0.2842 1.3579 0.2421
BXD69 m 0.6 0.2842 1.1579 0.0421
BXD70 f -0.2 0.2842 0.3579 -0.7579
BXD70 m 0.2 0.2842 0.7579 -0.3579
BXD73 f 0.8 0.2842 1.3579 0.2421
BXD73 m 0.3 0.2842 0.8579 -0.2579
BXD75 f 0.8 0.2842 1.3579 0.2421
BXD75 m 0.7 0.2842 1.2579 0.1421
BXD77 f -0.3 0.4493 0.582 -1.182
BXD77 m 0.7 0.4493 1.582 -0.182
BXD8 f 0.8 0.2842 1.3579 0.2421
BXD8 m 1.0 0.2842 1.5579 0.4421
BXD80 f 0.3 0.2842 0.8579 -0.2579
BXD80 m 0.1 0.2842 0.6579 -0.4579
BXD81 f 0.7 0.2842 1.2579 0.1421
BXD81 m 0.3 0.2842 0.8579 -0.2579
BXD84 f 1.3 0.2842 1.8579 0.7421
BXD84 m 0.9 0.2842 1.4579 0.3421
BXD85 f 0.45 0.4493 1.332 -0.432
BXD85 m 0.2 0.4493 1.082 -0.682
BXD86 f 0.5 0.2842 1.0579 -0.0579
BXD86 m 0.6 0.2842 1.1579 0.0421
BXD87 f 0.9 0.2842 1.4579 0.3421
BXD87 m 0.8 0.2842 1.3579 0.2421
BXD89 f 0.4 0.2842 0.9579 -0.1579
BXD89 m 0.6 0.2842 1.1579 0.0421
BXD90 f 0.3667 0.3669 1.0868 -0.3535
BXD90 m 0.8667 0.3669 1.5868 0.1465
BXD92 f 1.2 0.6355 2.4474 -0.0474
BXD92 m -0.3 0.5189 0.7185 -1.3185
BXD96 f 0.8 0.2842 1.3579 0.2421
BXD96 m 0.5 0.2842 1.0579 -0.0579
BXD97 f 0.7 0.2842 1.2579 0.1421
BXD97 m 0.7 0.2842 1.2579 0.1421
BXD98 f 0.7 0.3669 1.4202 -0.0202
BXD98 m 1.1286 0.3397 1.7953 0.4618
C57BL/6J f 0.0333 0.3669 0.7535 -0.6868
C57BL/6J m -0.1 0.2842 0.4579 -0.6579
DBA/2J f 0.1 0.2842 0.6579 -0.4579
DBA/2J m 0.5 0.2842 1.0579 -0.0579


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 0.7 0.4493 1.582 -0.182
BXD100 both 0.75 0.201 1.1445 0.3555
BXD101 both 0.3667 0.2427 0.843 -0.1097
BXD102 both -0.2 0.201 0.1945 -0.5945
BXD11 both 0.6 0.201 0.9945 0.2055
BXD13 both 0.5 0.201 0.8945 0.1055
BXD14 both 0.4 0.201 0.7945 0.0055
BXD15 both 0.7 0.201 1.0945 0.3055
BXD16 both 0.35 0.201 0.7445 -0.0445
BXD19 both 0.45 0.4493 1.332 -0.432
BXD2 both 0.35 0.201 0.7445 -0.0445
BXD21 both -0.5 0.2131 -0.0816 -0.9184
BXD27 both 0.45 0.201 0.8445 0.0555
BXD28 both 0.6 0.201 0.9945 0.2055
BXD31 both 0.55 0.201 0.9445 0.1555
BXD32 both 0.75 0.201 1.1445 0.3555
BXD34 both 0.7 0.4493 1.582 -0.182
BXD39 both 0.5 0.201 0.8945 0.1055
BXD40 both 0.55 0.201 0.9445 0.1555
BXD42 both 0.25 0.201 0.6445 -0.1445
BXD43 both 0.7 0.201 1.0945 0.3055
BXD44 both 1.1 0.201 1.4945 0.7055
BXD48 both 0.85 0.201 1.2445 0.4555
BXD49 both 0.9 0.201 1.2945 0.5055
BXD50 both 0.7 0.201 1.0945 0.3055
BXD51 both 0.65 0.201 1.0445 0.2555
BXD6 both 0.45 0.201 0.8445 0.0555
BXD61 both 0.75 0.201 1.1445 0.3555
BXD62 both 0.65 0.201 1.0445 0.2555
BXD65 both 0.8167 0.232 1.2721 0.3612
BXD66 both 0.7 0.3177 1.3237 0.0763
BXD68 both 0.325 0.2901 0.8944 -0.2444
BXD69 both 0.7 0.201 1.0945 0.3055
BXD70 both 0.0 0.201 0.3945 -0.3945
BXD73 both 0.55 0.201 0.9445 0.1555
BXD75 both 0.75 0.201 1.1445 0.3555
BXD77 both 0.2 0.3177 0.8237 -0.4237
BXD8 both 0.9 0.201 1.2945 0.5055
BXD80 both 0.2 0.201 0.5945 -0.1945
BXD81 both 0.5 0.201 0.8945 0.1055
BXD84 both 1.1 0.201 1.4945 0.7055
BXD85 both 0.325 0.3177 0.9487 -0.2987
BXD86 both 0.55 0.201 0.9445 0.1555
BXD87 both 0.85 0.201 1.2445 0.4555
BXD89 both 0.5 0.201 0.8945 0.1055
BXD90 both 0.6167 0.2594 1.1259 0.1074
BXD92 both 0.45 0.4102 1.2552 -0.3552
BXD96 both 0.65 0.201 1.0445 0.2555
BXD97 both 0.7 0.201 1.0945 0.3055
BXD98 both 0.9143 0.25 1.405 0.4236
C57BL/6J both -0.0333 0.232 0.4221 -0.4888
DBA/2J both 0.3 0.201 0.6945 -0.0945




  GWAS USING LINEAR MIXED MODELS