Project measure / variable:   Crusio1   num_arms_d3

ID, description, units MPD:62023   num_arms_d3   number of different arms visited during first 8 arm choices of a trial   [n]  day 3  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
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  STRAIN COMPARISON PLOT
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Crusio1 - number of different arms visited during first 8 arm choices of a trial day 3



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means5.637   n 5.6926   n
Median of the strain means5.7   n 5.75   n
SD of the strain means± 0.58574 ± 0.3513
Coefficient of variation (CV)0.1039 0.0617
Min–max range of strain means3.0   –   7.0   n 5.0   –   6.5   n
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.002 0.002 0.0023 0.9615
strain 51 65.6563 1.2874 1.5172 0.0129
sex:strain 51 47.8901 0.939 1.1067 0.2868
Residuals 796 675.4238 0.8485


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 5.0 0.0   2   0.0 0.0 5.0, 5.0 -1.09
BXD1 m 5.5 2.1213   2   1.5 0.3857 4.0, 7.0 -0.55
BXD100 f 6.2 1.0328   10 0.3266 0.1666 4.0, 7.0 0.96
BXD100 m 6.5 1.0801   10 0.34157 0.1662 4.0, 8.0 2.3
BXD101 f 5.5 1.0488   6 0.42817 0.1907 4.0, 7.0 -0.23
BXD101 m 6.0 0.75593   8 0.26726 0.126 5.0, 7.0 0.88
BXD102 f 5.6 1.3499   10 0.42687 0.2411 4.0, 7.0 -0.06
BXD102 m 5.3 1.2517   10 0.39581 0.2362 3.0, 7.0 -1.12
BXD11 f 5.9 0.56765   10 0.17951 0.0962 5.0, 7.0 0.45
BXD11 m 6.3 0.82327   10 0.26034 0.1307 5.0, 8.0 1.73
BXD13 f 5.3 0.67495   10 0.21344 0.1273 4.0, 6.0 -0.58
BXD13 m 6.0 0.66667   10 0.21082 0.1111 5.0, 7.0 0.88
BXD14 f 5.9 1.1972   10 0.37859 0.2029 4.0, 8.0 0.45
BXD14 m 5.6 1.075   10 0.33993 0.192 4.0, 7.0 -0.26
BXD15 f 6.2 1.0328   10 0.3266 0.1666 5.0, 8.0 0.96
BXD15 m 5.8 0.63246   10 0.2 0.109 5.0, 7.0 0.31
BXD16 f 5.2 0.78881   10 0.24944 0.1517 4.0, 6.0 -0.75
BXD16 m 6.1 1.1005   10 0.34801 0.1804 4.0, 8.0 1.16
BXD18 f 3.0 0.0   1   0.0 0.0 3.0, 3.0 -4.5
BXD18 m 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 -0.55
BXD19 f 6.0 1.4142   2   1.0 0.2357 5.0, 7.0 0.62
BXD19 m 6.0 1.4142   2   1.0 0.2357 5.0, 7.0 0.88
BXD2 f 4.9 0.8756   10 0.27689 0.1787 4.0, 6.0 -1.26
BXD2 m 5.2 0.63246   10 0.2 0.1216 4.0, 6.0 -1.4
BXD21 f 4.7 0.67495   10 0.21344 0.1436 4.0, 6.0 -1.6
BXD21 m 5.0 1.069   8 0.37796 0.2138 3.0, 6.0 -1.97
BXD27 f 5.7 1.4181   10 0.44845 0.2488 3.0, 7.0 0.11
BXD27 m 5.7 0.82327   10 0.26034 0.1444 4.0, 7.0 0.02
BXD28 f 6.0 0.94281   10 0.29814 0.1571 5.0, 7.0 0.62
BXD28 m 5.4 1.1738   10 0.37118 0.2174 3.0, 7.0 -0.83
BXD31 f 6.0 0.8165   10 0.2582 0.1361 5.0, 7.0 0.62
BXD31 m 5.8 1.0328   10 0.3266 0.1781 4.0, 7.0 0.31
BXD32 f 5.8 0.63246   10 0.2 0.109 5.0, 7.0 0.28
BXD32 m 5.1 0.8756   10 0.27689 0.1717 3.0, 6.0 -1.69
BXD33 f 4.0 0.0   1   0.0 0.0 4.0, 4.0 -2.79
BXD33 m 5.0 0.0   1   0.0 0.0 5.0, 5.0 -1.97
BXD34 f 7.0 0.0   2   0.0 0.0 7.0, 7.0 2.33
BXD34 m 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 -0.55
BXD39 f 5.9 0.73786   10 0.23333 0.1251 5.0, 7.0 0.45
BXD39 m 5.5 0.84984   10 0.26874 0.1545 4.0, 7.0 -0.55
BXD40 f 6.1 0.31623   10 0.1 0.0518 6.0, 7.0 0.79
BXD40 m 5.4 0.5164   10 0.1633 0.0956 5.0, 6.0 -0.83
BXD42 f 5.6 0.69921   10 0.22111 0.1249 4.0, 6.0 -0.06
BXD42 m 6.2 0.91894   10 0.29059 0.1482 5.0, 7.0 1.44
BXD43 f 5.6 1.075   10 0.33993 0.192 4.0, 7.0 -0.06
BXD43 m 5.4 1.1738   10 0.37118 0.2174 4.0, 7.0 -0.83
BXD44 f 5.5 0.52705   10 0.16667 0.0958 5.0, 6.0 -0.23
BXD44 m 6.2 0.78881   10 0.24944 0.1272 5.0, 8.0 1.44
BXD48 f 5.5 0.97183   10 0.30732 0.1767 4.0, 7.0 -0.23
BXD48 m 5.5 1.0801   10 0.34157 0.1964 4.0, 7.0 -0.55
BXD49 f 6.2 0.63246   10 0.2 0.102 5.0, 7.0 0.96
BXD49 m 5.8 1.2293   10 0.38873 0.2119 3.0, 7.0 0.31
BXD50 f 5.7 0.82327   10 0.26034 0.1444 4.0, 7.0 0.11
BXD50 m 5.4 0.96609   10 0.30551 0.1789 4.0, 7.0 -0.83
BXD51 f 6.1 0.99443   10 0.31447 0.163 5.0, 7.0 0.79
BXD51 m 5.9 0.73786   10 0.23333 0.1251 5.0, 7.0 0.59
BXD6 f 5.9 0.8756   10 0.27689 0.1484 5.0, 8.0 0.45
BXD6 m 5.6 0.96609   10 0.30551 0.1725 4.0, 7.0 -0.26
BXD61 f 5.6 0.96609   10 0.30551 0.1725 4.0, 7.0 -0.06
BXD61 m 5.5 0.70711   10 0.22361 0.1286 4.0, 6.0 -0.55
BXD62 f 5.6 1.075   10 0.33993 0.192 4.0, 7.0 -0.06
BXD62 m 5.9 0.99443   10 0.31447 0.1685 4.0, 7.0 0.59
BXD65 f 5.1667 0.75277   6 0.30732 0.1457 4.0, 6.0 -0.8
BXD65 m 6.1 0.73786   10 0.23333 0.121 5.0, 7.0 1.16
BXD66 f 6.25 0.5   4 0.25 0.08 6.0, 7.0 1.05
BXD66 m 5.75 0.5   4 0.25 0.087 5.0, 6.0 0.16
BXD68 f 5.75 0.5   4 0.25 0.087 5.0, 6.0 0.19
BXD68 m 6.0 1.2649   6 0.5164 0.2108 5.0, 8.0 0.88
BXD69 f 5.5 0.97183   10 0.30732 0.1767 4.0, 7.0 -0.23
BXD69 m 5.2 1.3984   10 0.44222 0.2689 2.0, 7.0 -1.4
BXD70 f 5.5 0.52705   10 0.16667 0.0958 5.0, 6.0 -0.23
BXD70 m 5.3 0.82327   10 0.26034 0.1553 4.0, 6.0 -1.12
BXD71 m 6.0 0.0   2   0.0 0.0 6.0, 6.0 0.88
BXD73 f 5.7 0.94868   10 0.3 0.1664 4.0, 7.0 0.11
BXD73 m 6.1 0.73786   10 0.23333 0.121 5.0, 7.0 1.16
BXD75 f 5.5 1.0801   10 0.34157 0.1964 4.0, 7.0 -0.23
BXD75 m 5.6 0.69921   10 0.22111 0.1249 5.0, 7.0 -0.26
BXD77 f 5.75 1.5   4 0.75 0.2609 5.0, 8.0 0.19
BXD77 m 5.75 1.2583   4 0.62915 0.2188 4.0, 7.0 0.16
BXD8 f 6.3 0.82327   10 0.26034 0.1307 5.0, 7.0 1.13
BXD8 m 5.4 0.96609   10 0.30551 0.1789 4.0, 7.0 -0.83
BXD80 f 5.5 0.84984   10 0.26874 0.1545 4.0, 7.0 -0.23
BXD80 m 5.2 1.3984   10 0.44222 0.2689 4.0, 7.0 -1.4
BXD81 f 5.7 0.94868   10 0.3 0.1664 4.0, 7.0 0.11
BXD81 m 5.3 0.94868   10 0.3 0.179 4.0, 7.0 -1.12
BXD84 f 5.4 0.5164   10 0.1633 0.0956 5.0, 6.0 -0.4
BXD84 m 6.0 1.0541   10 0.33333 0.1757 4.0, 7.0 0.88
BXD85 f 5.75 0.5   4 0.25 0.087 5.0, 6.0 0.19
BXD85 m 6.0 0.8165   4 0.40825 0.1361 5.0, 7.0 0.88
BXD86 f 5.8 1.0328   10 0.3266 0.1781 5.0, 8.0 0.28
BXD86 m 5.4 0.69921   10 0.22111 0.1295 5.0, 7.0 -0.83
BXD87 f 6.1 0.56765   10 0.17951 0.0931 5.0, 7.0 0.79
BXD87 m 6.0 0.94281   10 0.29814 0.1571 4.0, 7.0 0.88
BXD89 f 5.7 0.48305   10 0.15275 0.0847 5.0, 6.0 0.11
BXD89 m 5.8 0.63246   10 0.2 0.109 5.0, 7.0 0.31
BXD90 f 6.3333 1.0328   6 0.42164 0.1631 5.0, 8.0 1.19
BXD90 m 5.8333 0.75277   6 0.30732 0.129 5.0, 7.0 0.4
BXD92 f 6.0 1.4142   2   1.0 0.2357 5.0, 7.0 0.62
BXD92 m 6.0 1.0   3 0.57735 0.1667 5.0, 7.0 0.88
BXD96 f 5.6 1.075   10 0.33993 0.192 4.0, 7.0 -0.06
BXD96 m 5.4 1.075   10 0.33993 0.1991 3.0, 7.0 -0.83
BXD97 f 5.5 0.70711   10 0.22361 0.1286 4.0, 6.0 -0.23
BXD97 m 5.9 0.8756   10 0.27689 0.1484 5.0, 7.0 0.59
BXD98 f 5.1667 1.472   6 0.60093 0.2849 3.0, 7.0 -0.8
BXD98 m 5.8571 0.89974   7 0.34007 0.1536 5.0, 7.0 0.47
C57BL/6J f 5.8333 0.98319   6 0.40139 0.1685 5.0, 7.0 0.34
C57BL/6J m 5.5 0.97183   10 0.30732 0.1767 4.0, 7.0 -0.55
DBA/2J f 5.4 0.69921   10 0.22111 0.1295 4.0, 6.0 -0.4
DBA/2J m 6.1 0.56765   10 0.17951 0.0931 5.0, 7.0 1.16


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 5.0 0.6514 6.2786 3.7214
BXD1 m 5.5 0.6514 6.7786 4.2214
BXD100 f 6.2 0.2913 6.7718 5.6282
BXD100 m 6.5 0.2913 7.0718 5.9282
BXD101 f 5.5 0.3761 6.2382 4.7618
BXD101 m 6.0 0.3257 6.6393 5.3607
BXD102 f 5.6 0.2913 6.1718 5.0282
BXD102 m 5.3 0.2913 5.8718 4.7282
BXD11 f 5.9 0.2913 6.4718 5.3282
BXD11 m 6.3 0.2913 6.8718 5.7282
BXD13 f 5.3 0.2913 5.8718 4.7282
BXD13 m 6.0 0.2913 6.5718 5.4282
BXD14 f 5.9 0.2913 6.4718 5.3282
BXD14 m 5.6 0.2913 6.1718 5.0282
BXD15 f 6.2 0.2913 6.7718 5.6282
BXD15 m 5.8 0.2913 6.3718 5.2282
BXD16 f 5.2 0.2913 5.7718 4.6282
BXD16 m 6.1 0.2913 6.6718 5.5282
BXD19 f 6.0 0.6514 7.2786 4.7214
BXD19 m 6.0 0.6514 7.2786 4.7214
BXD2 f 4.9 0.2913 5.4718 4.3282
BXD2 m 5.2 0.2913 5.7718 4.6282
BXD21 f 4.7 0.2913 5.2718 4.1282
BXD21 m 5.0 0.3257 5.6393 4.3607
BXD27 f 5.7 0.2913 6.2718 5.1282
BXD27 m 5.7 0.2913 6.2718 5.1282
BXD28 f 6.0 0.2913 6.5718 5.4282
BXD28 m 5.4 0.2913 5.9718 4.8282
BXD31 f 6.0 0.2913 6.5718 5.4282
BXD31 m 5.8 0.2913 6.3718 5.2282
BXD32 f 5.8 0.2913 6.3718 5.2282
BXD32 m 5.1 0.2913 5.6718 4.5282
BXD34 f 7.0 0.6514 8.2786 5.7214
BXD34 m 5.5 0.6514 6.7786 4.2214
BXD39 f 5.9 0.2913 6.4718 5.3282
BXD39 m 5.5 0.2913 6.0718 4.9282
BXD40 f 6.1 0.2913 6.6718 5.5282
BXD40 m 5.4 0.2913 5.9718 4.8282
BXD42 f 5.6 0.2913 6.1718 5.0282
BXD42 m 6.2 0.2913 6.7718 5.6282
BXD43 f 5.6 0.2913 6.1718 5.0282
BXD43 m 5.4 0.2913 5.9718 4.8282
BXD44 f 5.5 0.2913 6.0718 4.9282
BXD44 m 6.2 0.2913 6.7718 5.6282
BXD48 f 5.5 0.2913 6.0718 4.9282
BXD48 m 5.5 0.2913 6.0718 4.9282
BXD49 f 6.2 0.2913 6.7718 5.6282
BXD49 m 5.8 0.2913 6.3718 5.2282
BXD50 f 5.7 0.2913 6.2718 5.1282
BXD50 m 5.4 0.2913 5.9718 4.8282
BXD51 f 6.1 0.2913 6.6718 5.5282
BXD51 m 5.9 0.2913 6.4718 5.3282
BXD6 f 5.9 0.2913 6.4718 5.3282
BXD6 m 5.6 0.2913 6.1718 5.0282
BXD61 f 5.6 0.2913 6.1718 5.0282
BXD61 m 5.5 0.2913 6.0718 4.9282
BXD62 f 5.6 0.2913 6.1718 5.0282
BXD62 m 5.9 0.2913 6.4718 5.3282
BXD65 f 5.1667 0.3761 5.9049 4.4285
BXD65 m 6.1 0.2913 6.6718 5.5282
BXD66 f 6.25 0.4606 7.1541 5.3459
BXD66 m 5.75 0.4606 6.6541 4.8459
BXD68 f 5.75 0.4606 6.6541 4.8459
BXD68 m 6.0 0.3761 6.7382 5.2618
BXD69 f 5.5 0.2913 6.0718 4.9282
BXD69 m 5.2 0.2913 5.7718 4.6282
BXD70 f 5.5 0.2913 6.0718 4.9282
BXD70 m 5.3 0.2913 5.8718 4.7282
BXD73 f 5.7 0.2913 6.2718 5.1282
BXD73 m 6.1 0.2913 6.6718 5.5282
BXD75 f 5.5 0.2913 6.0718 4.9282
BXD75 m 5.6 0.2913 6.1718 5.0282
BXD77 f 5.75 0.4606 6.6541 4.8459
BXD77 m 5.75 0.4606 6.6541 4.8459
BXD8 f 6.3 0.2913 6.8718 5.7282
BXD8 m 5.4 0.2913 5.9718 4.8282
BXD80 f 5.5 0.2913 6.0718 4.9282
BXD80 m 5.2 0.2913 5.7718 4.6282
BXD81 f 5.7 0.2913 6.2718 5.1282
BXD81 m 5.3 0.2913 5.8718 4.7282
BXD84 f 5.4 0.2913 5.9718 4.8282
BXD84 m 6.0 0.2913 6.5718 5.4282
BXD85 f 5.75 0.4606 6.6541 4.8459
BXD85 m 6.0 0.4606 6.9041 5.0959
BXD86 f 5.8 0.2913 6.3718 5.2282
BXD86 m 5.4 0.2913 5.9718 4.8282
BXD87 f 6.1 0.2913 6.6718 5.5282
BXD87 m 6.0 0.2913 6.5718 5.4282
BXD89 f 5.7 0.2913 6.2718 5.1282
BXD89 m 5.8 0.2913 6.3718 5.2282
BXD90 f 6.3333 0.3761 7.0715 5.5951
BXD90 m 5.8333 0.3761 6.5715 5.0951
BXD92 f 6.0 0.6514 7.2786 4.7214
BXD92 m 6.0 0.5318 7.044 4.956
BXD96 f 5.6 0.2913 6.1718 5.0282
BXD96 m 5.4 0.2913 5.9718 4.8282
BXD97 f 5.5 0.2913 6.0718 4.9282
BXD97 m 5.9 0.2913 6.4718 5.3282
BXD98 f 5.1667 0.3761 5.9049 4.4285
BXD98 m 5.8571 0.3482 6.5406 5.1737
C57BL/6J f 5.8333 0.3761 6.5715 5.0951
C57BL/6J m 5.5 0.2913 6.0718 4.9282
DBA/2J f 5.4 0.2913 5.9718 4.8282
DBA/2J m 6.1 0.2913 6.6718 5.5282


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 5.25 0.4606 6.1541 4.3459
BXD100 both 6.35 0.206 6.7543 5.9457
BXD101 both 5.75 0.2487 6.2383 5.2617
BXD102 both 5.45 0.206 5.8543 5.0457
BXD11 both 6.1 0.206 6.5043 5.6957
BXD13 both 5.65 0.206 6.0543 5.2457
BXD14 both 5.75 0.206 6.1543 5.3457
BXD15 both 6.0 0.206 6.4043 5.5957
BXD16 both 5.65 0.206 6.0543 5.2457
BXD19 both 6.0 0.4606 6.9041 5.0959
BXD2 both 5.05 0.206 5.4543 4.6457
BXD21 both 4.85 0.2185 5.2788 4.4212
BXD27 both 5.7 0.206 6.1043 5.2957
BXD28 both 5.7 0.206 6.1043 5.2957
BXD31 both 5.9 0.206 6.3043 5.4957
BXD32 both 5.45 0.206 5.8543 5.0457
BXD34 both 6.25 0.4606 7.1541 5.3459
BXD39 both 5.7 0.206 6.1043 5.2957
BXD40 both 5.75 0.206 6.1543 5.3457
BXD42 both 5.9 0.206 6.3043 5.4957
BXD43 both 5.5 0.206 5.9043 5.0957
BXD44 both 5.85 0.206 6.2543 5.4457
BXD48 both 5.5 0.206 5.9043 5.0957
BXD49 both 6.0 0.206 6.4043 5.5957
BXD50 both 5.55 0.206 5.9543 5.1457
BXD51 both 6.0 0.206 6.4043 5.5957
BXD6 both 5.75 0.206 6.1543 5.3457
BXD61 both 5.55 0.206 5.9543 5.1457
BXD62 both 5.75 0.206 6.1543 5.3457
BXD65 both 5.6333 0.2378 6.1002 5.1665
BXD66 both 6.0 0.3257 6.6393 5.3607
BXD68 both 5.875 0.2973 6.4586 5.2914
BXD69 both 5.35 0.206 5.7543 4.9457
BXD70 both 5.4 0.206 5.8043 4.9957
BXD73 both 5.9 0.206 6.3043 5.4957
BXD75 both 5.55 0.206 5.9543 5.1457
BXD77 both 5.75 0.3257 6.3893 5.1107
BXD8 both 5.85 0.206 6.2543 5.4457
BXD80 both 5.35 0.206 5.7543 4.9457
BXD81 both 5.5 0.206 5.9043 5.0957
BXD84 both 5.7 0.206 6.1043 5.2957
BXD85 both 5.875 0.3257 6.5143 5.2357
BXD86 both 5.6 0.206 6.0043 5.1957
BXD87 both 6.05 0.206 6.4543 5.6457
BXD89 both 5.75 0.206 6.1543 5.3457
BXD90 both 6.0833 0.2659 6.6053 5.5614
BXD92 both 6.0 0.4204 6.8253 5.1747
BXD96 both 5.5 0.206 5.9043 5.0957
BXD97 both 5.7 0.206 6.1043 5.2957
BXD98 both 5.5119 0.2562 6.0149 5.0089
C57BL/6J both 5.6667 0.2378 6.1335 5.1998
DBA/2J both 5.75 0.206 6.1543 5.3457




  GWAS USING LINEAR MIXED MODELS