Project measure / variable:   Crusio1   num_arms_d2

ID, description, units MPD:62022   num_arms_d2   number of different arms visited during first 8 arm choices of a trial   [n]  day 2  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
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  STRAIN COMPARISON PLOT
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Crusio1 - number of different arms visited during first 8 arm choices of a trial day 2



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means5.5151   n 5.3791   n
Median of the strain means5.5   n 5.3   n
SD of the strain means± 0.45372 ± 0.43491
Coefficient of variation (CV)0.0823 0.0809
Min–max range of strain means4.3   –   7.0   n 4.7   –   6.6   n
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.4619 2.4619 2.9275 0.0875
strain 51 78.9122 1.5473 1.84 0.0004
sex:strain 51 58.7994 1.1529 1.371 0.0468
Residuals 796 669.3821 0.8409


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 6.5 0.70711   2   0.5 0.1088 6.0, 7.0 2.17
BXD1 m 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 0.28
BXD100 f 5.6 0.69921   10 0.22111 0.1249 4.0, 6.0 0.19
BXD100 m 5.5 0.84984   10 0.26874 0.1545 4.0, 7.0 0.28
BXD101 f 6.0 1.2649   6 0.5164 0.2108 4.0, 7.0 1.07
BXD101 m 5.875 0.64087   8 0.22658 0.1091 5.0, 7.0 1.14
BXD102 f 5.5 1.0801   10 0.34157 0.1964 4.0, 7.0 -0.03
BXD102 m 5.5 0.52705   10 0.16667 0.0958 5.0, 6.0 0.28
BXD11 f 5.1 1.1005   10 0.34801 0.2158 3.0, 7.0 -0.91
BXD11 m 6.1 0.73786   10 0.23333 0.121 5.0, 7.0 1.66
BXD13 f 5.8 0.91894   10 0.29059 0.1584 4.0, 7.0 0.63
BXD13 m 5.2 0.78881   10 0.24944 0.1517 4.0, 6.0 -0.41
BXD14 f 5.2 1.0328   10 0.3266 0.1986 4.0, 7.0 -0.69
BXD14 m 5.5 0.70711   10 0.22361 0.1286 5.0, 7.0 0.28
BXD15 f 5.6 1.1738   10 0.37118 0.2096 4.0, 7.0 0.19
BXD15 m 6.0 0.66667   10 0.21082 0.1111 5.0, 7.0 1.43
BXD16 f 5.4 0.69921   10 0.22111 0.1295 4.0, 6.0 -0.25
BXD16 m 5.1 0.8756   10 0.27689 0.1717 4.0, 6.0 -0.64
BXD18 f 6.0 0.0   1   0.0 0.0 6.0, 6.0 1.07
BXD18 m 6.5 0.70711   2   0.5 0.1088 6.0, 7.0 2.58
BXD19 f 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 -0.03
BXD19 m 5.0 0.0   2   0.0 0.0 5.0, 5.0 -0.87
BXD2 f 5.4 0.96609   10 0.30551 0.1789 4.0, 7.0 -0.25
BXD2 m 5.0 0.94281   10 0.29814 0.1886 3.0, 6.0 -0.87
BXD21 f 4.7 0.67495   10 0.21344 0.1436 4.0, 6.0 -1.8
BXD21 m 5.0 1.1952   8 0.42258 0.239 3.0, 7.0 -0.87
BXD27 f 5.7 0.94868   10 0.3 0.1664 4.0, 7.0 0.41
BXD27 m 5.2 1.0328   10 0.3266 0.1986 4.0, 7.0 -0.41
BXD28 f 5.6 0.96609   10 0.30551 0.1725 4.0, 7.0 0.19
BXD28 m 5.4 0.84327   10 0.26667 0.1562 4.0, 7.0 0.05
BXD31 f 5.7 0.82327   10 0.26034 0.1444 5.0, 7.0 0.41
BXD31 m 5.6 0.96609   10 0.30551 0.1725 4.0, 7.0 0.51
BXD32 f 5.6 0.69921   10 0.22111 0.1249 5.0, 7.0 0.19
BXD32 m 5.0 1.0541   10 0.33333 0.2108 3.0, 6.0 -0.87
BXD33 f 7.0 0.0   1   0.0 0.0 7.0, 7.0 3.27
BXD33 m 6.0 0.0   1   0.0 0.0 6.0, 6.0 1.43
BXD34 f 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 -0.03
BXD34 m 5.0 0.0   2   0.0 0.0 5.0, 5.0 -0.87
BXD39 f 5.8 1.0328   10 0.3266 0.1781 4.0, 7.0 0.63
BXD39 m 5.6 0.69921   10 0.22111 0.1249 4.0, 6.0 0.51
BXD40 f 5.5 0.97183   10 0.30732 0.1767 4.0, 7.0 -0.03
BXD40 m 5.4 1.075   10 0.33993 0.1991 4.0, 7.0 0.05
BXD42 f 5.1 0.73786   10 0.23333 0.1447 4.0, 6.0 -0.91
BXD42 m 5.7 0.67495   10 0.21344 0.1184 5.0, 7.0 0.74
BXD43 f 5.4 1.2649   10 0.4 0.2342 4.0, 8.0 -0.25
BXD43 m 4.7 0.48305   10 0.15275 0.1028 4.0, 5.0 -1.56
BXD44 f 5.4 0.69921   10 0.22111 0.1295 4.0, 6.0 -0.25
BXD44 m 4.9 0.73786   10 0.23333 0.1506 4.0, 6.0 -1.1
BXD48 f 4.9 0.56765   10 0.17951 0.1158 4.0, 6.0 -1.36
BXD48 m 5.7 1.1595   10 0.36667 0.2034 4.0, 8.0 0.74
BXD49 f 5.8 1.0328   10 0.3266 0.1781 4.0, 7.0 0.63
BXD49 m 5.9 0.99443   10 0.31447 0.1685 5.0, 8.0 1.2
BXD50 f 5.4 0.69921   10 0.22111 0.1295 4.0, 6.0 -0.25
BXD50 m 5.2 1.1353   10 0.35901 0.2183 3.0, 7.0 -0.41
BXD51 f 5.9 0.8756   10 0.27689 0.1484 5.0, 8.0 0.85
BXD51 m 4.8 0.78881   10 0.24944 0.1643 4.0, 6.0 -1.33
BXD6 f 5.7 1.1595   10 0.36667 0.2034 4.0, 7.0 0.41
BXD6 m 5.0 0.66667   10 0.21082 0.1333 4.0, 6.0 -0.87
BXD61 f 5.5 0.84984   10 0.26874 0.1545 4.0, 7.0 -0.03
BXD61 m 5.1 0.73786   10 0.23333 0.1447 4.0, 6.0 -0.64
BXD62 f 6.0 0.4714   10 0.14907 0.0786 5.0, 7.0 1.07
BXD62 m 6.6 0.84327   10 0.26667 0.1278 6.0, 8.0 2.81
BXD65 f 5.3333 1.2111   6 0.49441 0.2271 4.0, 7.0 -0.4
BXD65 m 5.1 1.1005   10 0.34801 0.2158 4.0, 7.0 -0.64
BXD66 f 5.5 0.57735   4 0.28868 0.105 5.0, 6.0 -0.03
BXD66 m 5.0 0.8165   4 0.40825 0.1633 4.0, 6.0 -0.87
BXD68 f 4.75 0.5   4 0.25 0.1053 4.0, 5.0 -1.69
BXD68 m 6.0 0.63246   6 0.2582 0.1054 5.0, 7.0 1.43
BXD69 f 5.6 0.96609   10 0.30551 0.1725 4.0, 7.0 0.19
BXD69 m 4.7 0.94868   10 0.3 0.2018 4.0, 6.0 -1.56
BXD70 f 5.6 0.84327   10 0.26667 0.1506 4.0, 7.0 0.19
BXD70 m 5.3 0.67495   10 0.21344 0.1273 4.0, 6.0 -0.18
BXD71 m 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 0.28
BXD73 f 5.6 0.96609   10 0.30551 0.1725 4.0, 7.0 0.19
BXD73 m 5.0 1.2472   10 0.39441 0.2494 3.0, 7.0 -0.87
BXD75 f 5.3 0.67495   10 0.21344 0.1273 4.0, 6.0 -0.47
BXD75 m 5.4 1.075   10 0.33993 0.1991 3.0, 7.0 0.05
BXD77 f 4.75 0.95743   4 0.47871 0.2016 4.0, 6.0 -1.69
BXD77 m 5.25 0.95743   4 0.47871 0.1824 4.0, 6.0 -0.3
BXD8 f 4.3 1.0593   10 0.335 0.2464 2.0, 5.0 -2.68
BXD8 m 5.5 0.97183   10 0.30732 0.1767 4.0, 7.0 0.28
BXD80 f 5.3 0.82327   10 0.26034 0.1553 4.0, 6.0 -0.47
BXD80 m 5.2 0.63246   10 0.2 0.1216 4.0, 6.0 -0.41
BXD81 f 5.9 0.8756   10 0.27689 0.1484 4.0, 7.0 0.85
BXD81 m 5.3 0.82327   10 0.26034 0.1553 4.0, 6.0 -0.18
BXD84 f 5.8 0.91894   10 0.29059 0.1584 5.0, 7.0 0.63
BXD84 m 5.6 0.96609   10 0.30551 0.1725 4.0, 7.0 0.51
BXD85 f 5.75 0.5   4 0.25 0.087 5.0, 6.0 0.52
BXD85 m 4.75 1.2583   4 0.62915 0.2649 3.0, 6.0 -1.45
BXD86 f 5.3 1.1595   10 0.36667 0.2188 3.0, 7.0 -0.47
BXD86 m 5.5 0.70711   10 0.22361 0.1286 5.0, 7.0 0.28
BXD87 f 6.1 1.1005   10 0.34801 0.1804 4.0, 8.0 1.29
BXD87 m 6.1 0.8756   10 0.27689 0.1435 5.0, 7.0 1.66
BXD89 f 5.7 1.2517   10 0.39581 0.2196 4.0, 8.0 0.41
BXD89 m 5.7 0.94868   10 0.3 0.1664 4.0, 7.0 0.74
BXD90 f 4.5 1.0488   6 0.42817 0.2331 3.0, 6.0 -2.24
BXD90 m 4.8333 1.169   6 0.47726 0.2419 4.0, 7.0 -1.26
BXD92 f 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 -0.03
BXD92 m 5.0 1.0   3 0.57735 0.2 4.0, 6.0 -0.87
BXD96 f 5.3 0.82327   10 0.26034 0.1553 4.0, 6.0 -0.47
BXD96 m 5.1 0.8756   10 0.27689 0.1717 4.0, 6.0 -0.64
BXD97 f 5.6 0.69921   10 0.22111 0.1249 5.0, 7.0 0.19
BXD97 m 5.5 1.0801   10 0.34157 0.1964 4.0, 7.0 0.28
BXD98 f 6.0 1.0954   6 0.44721 0.1826 4.0, 7.0 1.07
BXD98 m 5.1429 0.89974   7 0.34007 0.1749 4.0, 6.0 -0.54
C57BL/6J f 5.3333 1.2111   6 0.49441 0.2271 4.0, 7.0 -0.4
C57BL/6J m 5.7 1.1595   10 0.36667 0.2034 4.0, 7.0 0.74
DBA/2J f 5.2 0.91894   10 0.29059 0.1767 4.0, 7.0 -0.69
DBA/2J m 5.1 1.1005   10 0.34801 0.2158 3.0, 7.0 -0.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 6.5 0.6484 7.7728 5.2272
BXD1 m 5.5 0.6484 6.7728 4.2272
BXD100 f 5.6 0.29 6.1692 5.0308
BXD100 m 5.5 0.29 6.0692 4.9308
BXD101 f 6.0 0.3744 6.7349 5.2651
BXD101 m 5.875 0.3242 6.5114 5.2386
BXD102 f 5.5 0.29 6.0692 4.9308
BXD102 m 5.5 0.29 6.0692 4.9308
BXD11 f 5.1 0.29 5.6692 4.5308
BXD11 m 6.1 0.29 6.6692 5.5308
BXD13 f 5.8 0.29 6.3692 5.2308
BXD13 m 5.2 0.29 5.7692 4.6308
BXD14 f 5.2 0.29 5.7692 4.6308
BXD14 m 5.5 0.29 6.0692 4.9308
BXD15 f 5.6 0.29 6.1692 5.0308
BXD15 m 6.0 0.29 6.5692 5.4308
BXD16 f 5.4 0.29 5.9692 4.8308
BXD16 m 5.1 0.29 5.6692 4.5308
BXD19 f 5.5 0.6484 6.7728 4.2272
BXD19 m 5.0 0.6484 6.2728 3.7272
BXD2 f 5.4 0.29 5.9692 4.8308
BXD2 m 5.0 0.29 5.5692 4.4308
BXD21 f 4.7 0.29 5.2692 4.1308
BXD21 m 5.0 0.3242 5.6364 4.3636
BXD27 f 5.7 0.29 6.2692 5.1308
BXD27 m 5.2 0.29 5.7692 4.6308
BXD28 f 5.6 0.29 6.1692 5.0308
BXD28 m 5.4 0.29 5.9692 4.8308
BXD31 f 5.7 0.29 6.2692 5.1308
BXD31 m 5.6 0.29 6.1692 5.0308
BXD32 f 5.6 0.29 6.1692 5.0308
BXD32 m 5.0 0.29 5.5692 4.4308
BXD34 f 5.5 0.6484 6.7728 4.2272
BXD34 m 5.0 0.6484 6.2728 3.7272
BXD39 f 5.8 0.29 6.3692 5.2308
BXD39 m 5.6 0.29 6.1692 5.0308
BXD40 f 5.5 0.29 6.0692 4.9308
BXD40 m 5.4 0.29 5.9692 4.8308
BXD42 f 5.1 0.29 5.6692 4.5308
BXD42 m 5.7 0.29 6.2692 5.1308
BXD43 f 5.4 0.29 5.9692 4.8308
BXD43 m 4.7 0.29 5.2692 4.1308
BXD44 f 5.4 0.29 5.9692 4.8308
BXD44 m 4.9 0.29 5.4692 4.3308
BXD48 f 4.9 0.29 5.4692 4.3308
BXD48 m 5.7 0.29 6.2692 5.1308
BXD49 f 5.8 0.29 6.3692 5.2308
BXD49 m 5.9 0.29 6.4692 5.3308
BXD50 f 5.4 0.29 5.9692 4.8308
BXD50 m 5.2 0.29 5.7692 4.6308
BXD51 f 5.9 0.29 6.4692 5.3308
BXD51 m 4.8 0.29 5.3692 4.2308
BXD6 f 5.7 0.29 6.2692 5.1308
BXD6 m 5.0 0.29 5.5692 4.4308
BXD61 f 5.5 0.29 6.0692 4.9308
BXD61 m 5.1 0.29 5.6692 4.5308
BXD62 f 6.0 0.29 6.5692 5.4308
BXD62 m 6.6 0.29 7.1692 6.0308
BXD65 f 5.3333 0.3744 6.0682 4.5985
BXD65 m 5.1 0.29 5.6692 4.5308
BXD66 f 5.5 0.4585 6.4 4.6
BXD66 m 5.0 0.4585 5.9 4.1
BXD68 f 4.75 0.4585 5.65 3.85
BXD68 m 6.0 0.3744 6.7349 5.2651
BXD69 f 5.6 0.29 6.1692 5.0308
BXD69 m 4.7 0.29 5.2692 4.1308
BXD70 f 5.6 0.29 6.1692 5.0308
BXD70 m 5.3 0.29 5.8692 4.7308
BXD73 f 5.6 0.29 6.1692 5.0308
BXD73 m 5.0 0.29 5.5692 4.4308
BXD75 f 5.3 0.29 5.8692 4.7308
BXD75 m 5.4 0.29 5.9692 4.8308
BXD77 f 4.75 0.4585 5.65 3.85
BXD77 m 5.25 0.4585 6.15 4.35
BXD8 f 4.3 0.29 4.8692 3.7308
BXD8 m 5.5 0.29 6.0692 4.9308
BXD80 f 5.3 0.29 5.8692 4.7308
BXD80 m 5.2 0.29 5.7692 4.6308
BXD81 f 5.9 0.29 6.4692 5.3308
BXD81 m 5.3 0.29 5.8692 4.7308
BXD84 f 5.8 0.29 6.3692 5.2308
BXD84 m 5.6 0.29 6.1692 5.0308
BXD85 f 5.75 0.4585 6.65 4.85
BXD85 m 4.75 0.4585 5.65 3.85
BXD86 f 5.3 0.29 5.8692 4.7308
BXD86 m 5.5 0.29 6.0692 4.9308
BXD87 f 6.1 0.29 6.6692 5.5308
BXD87 m 6.1 0.29 6.6692 5.5308
BXD89 f 5.7 0.29 6.2692 5.1308
BXD89 m 5.7 0.29 6.2692 5.1308
BXD90 f 4.5 0.3744 5.2349 3.7651
BXD90 m 4.8333 0.3744 5.5682 4.0985
BXD92 f 5.5 0.6484 6.7728 4.2272
BXD92 m 5.0 0.5294 6.0393 3.9607
BXD96 f 5.3 0.29 5.8692 4.7308
BXD96 m 5.1 0.29 5.6692 4.5308
BXD97 f 5.6 0.29 6.1692 5.0308
BXD97 m 5.5 0.29 6.0692 4.9308
BXD98 f 6.0 0.3744 6.7349 5.2651
BXD98 m 5.1429 0.3466 5.8232 4.4625
C57BL/6J f 5.3333 0.3744 6.0682 4.5985
C57BL/6J m 5.7 0.29 6.2692 5.1308
DBA/2J f 5.2 0.29 5.7692 4.6308
DBA/2J m 5.1 0.29 5.6692 4.5308


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 6.0 0.4585 6.9 5.1
BXD100 both 5.55 0.2051 5.9525 5.1475
BXD101 both 5.9375 0.2476 6.4236 5.4514
BXD102 both 5.5 0.2051 5.9025 5.0975
BXD11 both 5.6 0.2051 6.0025 5.1975
BXD13 both 5.5 0.2051 5.9025 5.0975
BXD14 both 5.35 0.2051 5.7525 4.9475
BXD15 both 5.8 0.2051 6.2025 5.3975
BXD16 both 5.25 0.2051 5.6525 4.8475
BXD19 both 5.25 0.4585 6.15 4.35
BXD2 both 5.2 0.2051 5.6025 4.7975
BXD21 both 4.85 0.2175 5.2769 4.4231
BXD27 both 5.45 0.2051 5.8525 5.0475
BXD28 both 5.5 0.2051 5.9025 5.0975
BXD31 both 5.65 0.2051 6.0525 5.2475
BXD32 both 5.3 0.2051 5.7025 4.8975
BXD34 both 5.25 0.4585 6.15 4.35
BXD39 both 5.7 0.2051 6.1025 5.2975
BXD40 both 5.45 0.2051 5.8525 5.0475
BXD42 both 5.4 0.2051 5.8025 4.9975
BXD43 both 5.05 0.2051 5.4525 4.6475
BXD44 both 5.15 0.2051 5.5525 4.7475
BXD48 both 5.3 0.2051 5.7025 4.8975
BXD49 both 5.85 0.2051 6.2525 5.4475
BXD50 both 5.3 0.2051 5.7025 4.8975
BXD51 both 5.35 0.2051 5.7525 4.9475
BXD6 both 5.35 0.2051 5.7525 4.9475
BXD61 both 5.3 0.2051 5.7025 4.8975
BXD62 both 6.3 0.2051 6.7025 5.8975
BXD65 both 5.2167 0.2368 5.6814 4.7519
BXD66 both 5.25 0.3242 5.8864 4.6136
BXD68 both 5.375 0.296 5.956 4.794
BXD69 both 5.15 0.2051 5.5525 4.7475
BXD70 both 5.45 0.2051 5.8525 5.0475
BXD73 both 5.3 0.2051 5.7025 4.8975
BXD75 both 5.35 0.2051 5.7525 4.9475
BXD77 both 5.0 0.3242 5.6364 4.3636
BXD8 both 4.9 0.2051 5.3025 4.4975
BXD80 both 5.25 0.2051 5.6525 4.8475
BXD81 both 5.6 0.2051 6.0025 5.1975
BXD84 both 5.7 0.2051 6.1025 5.2975
BXD85 both 5.25 0.3242 5.8864 4.6136
BXD86 both 5.4 0.2051 5.8025 4.9975
BXD87 both 6.1 0.2051 6.5025 5.6975
BXD89 both 5.7 0.2051 6.1025 5.2975
BXD90 both 4.6667 0.2647 5.1863 4.147
BXD92 both 5.25 0.4186 6.0716 4.4284
BXD96 both 5.2 0.2051 5.6025 4.7975
BXD97 both 5.55 0.2051 5.9525 5.1475
BXD98 both 5.5714 0.2551 6.0722 5.0707
C57BL/6J both 5.5167 0.2368 5.9814 5.0519
DBA/2J both 5.15 0.2051 5.5525 4.7475




  GWAS USING LINEAR MIXED MODELS