Project measure / variable:   Crusio1   num_arms_d1

ID, description, units MPD:62021   num_arms_d1   number of different arms visited during first 8 arm choices of a trial   [n]  day 1  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-13wks
Procedure radial maze
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  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
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Crusio1 - number of different arms visited during first 8 arm choices of a trial day 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means5.0994   n 5.0511   n
Median of the strain means5.0   n 5.1   n
SD of the strain means± 0.38606 ± 0.44618
Coefficient of variation (CV)0.0757 0.0883
Min–max range of strain means4.0   –   6.0   n 3.9   –   6.0   n
Mean sample size per strain8.3   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.8482 0.8482 0.8358 0.3609
strain 51 55.5077 1.0884 1.0725 0.3425
sex:strain 51 58.3813 1.1447 1.128 0.2549
Residuals 796 807.8083 1.0148


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 6.0 1.4142   2   1.0 0.2357 5.0, 7.0 2.33
BXD1 m 4.5 0.70711   2   0.5 0.1571 4.0, 5.0 -1.24
BXD100 f 5.1 0.73786   10 0.23333 0.1447 4.0, 6.0 0.0
BXD100 m 5.0 0.94281   10 0.29814 0.1886 4.0, 7.0 -0.11
BXD101 f 5.0 1.0954   6 0.44721 0.2191 3.0, 6.0 -0.26
BXD101 m 5.625 0.74402   8 0.26305 0.1323 4.0, 6.0 1.29
BXD102 f 4.9 1.5239   10 0.48189 0.311 3.0, 7.0 -0.52
BXD102 m 5.1 1.1005   10 0.34801 0.2158 4.0, 7.0 0.11
BXD11 f 5.0 0.94281   10 0.29814 0.1886 4.0, 7.0 -0.26
BXD11 m 5.1 0.8756   10 0.27689 0.1717 4.0, 6.0 0.11
BXD13 f 5.2 1.0328   10 0.3266 0.1986 3.0, 6.0 0.26
BXD13 m 5.3 0.82327   10 0.26034 0.1553 4.0, 7.0 0.56
BXD14 f 5.7 0.94868   10 0.3 0.1664 5.0, 8.0 1.56
BXD14 m 4.1 0.73786   10 0.23333 0.18 3.0, 5.0 -2.13
BXD15 f 5.6 0.84327   10 0.26667 0.1506 4.0, 7.0 1.3
BXD15 m 5.5 1.2693   10 0.40139 0.2308 3.0, 7.0 1.01
BXD16 f 5.0 0.8165   10 0.2582 0.1633 4.0, 6.0 -0.26
BXD16 m 4.8 0.63246   10 0.2 0.1318 4.0, 6.0 -0.56
BXD18 f 5.0 0.0   1   0.0 0.0 5.0, 5.0 -0.26
BXD18 m 4.5 0.70711   2   0.5 0.1571 4.0, 5.0 -1.24
BXD19 f 6.0 0.0   2   0.0 0.0 6.0, 6.0 2.33
BXD19 m 5.5 0.70711   2   0.5 0.1286 5.0, 6.0 1.01
BXD2 f 4.6 0.84327   10 0.26667 0.1833 3.0, 6.0 -1.29
BXD2 m 5.4 0.69921   10 0.22111 0.1295 4.0, 6.0 0.78
BXD21 f 5.0 1.1547   10 0.36515 0.2309 3.0, 7.0 -0.26
BXD21 m 5.25 0.70711   8 0.25 0.1347 4.0, 6.0 0.45
BXD27 f 5.0 1.1547   10 0.36515 0.2309 3.0, 7.0 -0.26
BXD27 m 4.8 0.91894   10 0.29059 0.1914 4.0, 7.0 -0.56
BXD28 f 4.8 1.3166   10 0.41633 0.2743 3.0, 7.0 -0.78
BXD28 m 3.9 0.99443   10 0.31447 0.255 3.0, 6.0 -2.58
BXD31 f 5.0 0.66667   10 0.21082 0.1333 4.0, 6.0 -0.26
BXD31 m 5.0 1.0541   10 0.33333 0.2108 3.0, 6.0 -0.11
BXD32 f 5.4 0.84327   10 0.26667 0.1562 4.0, 6.0 0.78
BXD32 m 5.0 1.2472   10 0.39441 0.2494 3.0, 7.0 -0.11
BXD33 f 4.0 0.0   1   0.0 0.0 4.0, 4.0 -2.85
BXD33 m 6.0 0.0   1   0.0 0.0 6.0, 6.0 2.13
BXD34 f 5.5 2.1213   2   1.5 0.3857 4.0, 7.0 1.04
BXD34 m 4.5 0.70711   2   0.5 0.1571 4.0, 5.0 -1.24
BXD39 f 5.0 0.66667   10 0.21082 0.1333 4.0, 6.0 -0.26
BXD39 m 4.3 1.4944   10 0.47258 0.3475 2.0, 7.0 -1.68
BXD40 f 5.4 1.4298   10 0.45216 0.2648 4.0, 8.0 0.78
BXD40 m 4.8 1.2293   10 0.38873 0.2561 3.0, 6.0 -0.56
BXD42 f 4.9 1.1005   10 0.34801 0.2246 4.0, 7.0 -0.52
BXD42 m 5.3 1.0593   10 0.335 0.1999 4.0, 7.0 0.56
BXD43 f 5.1 1.2867   10 0.40689 0.2523 2.0, 7.0 0.0
BXD43 m 4.9 1.1005   10 0.34801 0.2246 3.0, 7.0 -0.34
BXD44 f 4.8 0.78881   10 0.24944 0.1643 4.0, 6.0 -0.78
BXD44 m 5.1 0.8756   10 0.27689 0.1717 3.0, 6.0 0.11
BXD48 f 5.1 0.73786   10 0.23333 0.1447 4.0, 6.0 0.0
BXD48 m 5.1 1.2867   10 0.40689 0.2523 3.0, 7.0 0.11
BXD49 f 5.6 0.69921   10 0.22111 0.1249 5.0, 7.0 1.3
BXD49 m 5.5 1.0801   10 0.34157 0.1964 4.0, 7.0 1.01
BXD50 f 4.6 0.96609   10 0.30551 0.21 3.0, 6.0 -1.29
BXD50 m 4.7 1.1595   10 0.36667 0.2467 3.0, 6.0 -0.79
BXD51 f 5.6 0.84327   10 0.26667 0.1506 4.0, 7.0 1.3
BXD51 m 4.9 1.1005   10 0.34801 0.2246 3.0, 6.0 -0.34
BXD6 f 5.3 0.67495   10 0.21344 0.1273 4.0, 6.0 0.52
BXD6 m 4.8 1.0328   10 0.3266 0.2152 3.0, 6.0 -0.56
BXD61 f 4.8 1.3166   10 0.41633 0.2743 3.0, 7.0 -0.78
BXD61 m 5.2 1.0328   10 0.3266 0.1986 4.0, 7.0 0.33
BXD62 f 4.9 0.8756   10 0.27689 0.1787 4.0, 6.0 -0.52
BXD62 m 5.8 0.91894   10 0.29059 0.1584 4.0, 7.0 1.68
BXD65 f 5.1667 0.98319   6 0.40139 0.1903 4.0, 6.0 0.17
BXD65 m 5.2 0.91894   10 0.29059 0.1767 4.0, 7.0 0.33
BXD66 f 5.25 0.95743   4 0.47871 0.1824 4.0, 6.0 0.39
BXD66 m 5.5 1.0   4 0.5 0.1818 5.0, 7.0 1.01
BXD68 f 5.5 0.57735   4 0.28868 0.105 5.0, 6.0 1.04
BXD68 m 5.6667 0.8165   6 0.33333 0.1441 5.0, 7.0 1.38
BXD69 f 5.0 0.4714   10 0.14907 0.0943 4.0, 6.0 -0.26
BXD69 m 4.3 1.4181   10 0.44845 0.3298 2.0, 6.0 -1.68
BXD70 f 5.0 1.4142   10 0.44721 0.2828 3.0, 7.0 -0.26
BXD70 m 5.0 0.66667   10 0.21082 0.1333 4.0, 6.0 -0.11
BXD71 m 6.0 1.4142   2   1.0 0.2357 5.0, 7.0 2.13
BXD73 f 4.7 1.1595   10 0.36667 0.2467 3.0, 7.0 -1.03
BXD73 m 5.3 1.0593   10 0.335 0.1999 4.0, 7.0 0.56
BXD75 f 5.0 0.66667   10 0.21082 0.1333 4.0, 6.0 -0.26
BXD75 m 5.2 1.0328   10 0.3266 0.1986 3.0, 6.0 0.33
BXD77 f 4.5 0.57735   4 0.28868 0.1283 4.0, 5.0 -1.55
BXD77 m 4.75 0.5   4 0.25 0.1053 4.0, 5.0 -0.67
BXD8 f 4.6 0.69921   10 0.22111 0.152 3.0, 5.0 -1.29
BXD8 m 4.5 0.97183   10 0.30732 0.216 3.0, 6.0 -1.24
BXD80 f 5.1 1.2867   10 0.40689 0.2523 2.0, 7.0 0.0
BXD80 m 4.7 0.67495   10 0.21344 0.1436 3.0, 5.0 -0.79
BXD81 f 5.2 1.0328   10 0.3266 0.1986 4.0, 7.0 0.26
BXD81 m 5.3 0.67495   10 0.21344 0.1273 4.0, 6.0 0.56
BXD84 f 5.1 1.1005   10 0.34801 0.2158 3.0, 7.0 0.0
BXD84 m 5.2 1.1353   10 0.35901 0.2183 3.0, 7.0 0.33
BXD85 f 4.75 1.5   4 0.75 0.3158 3.0, 6.0 -0.9
BXD85 m 5.25 0.95743   4 0.47871 0.1824 4.0, 6.0 0.45
BXD86 f 4.8 0.91894   10 0.29059 0.1914 4.0, 6.0 -0.78
BXD86 m 5.3 0.94868   10 0.3 0.179 4.0, 7.0 0.56
BXD87 f 5.2 1.0328   10 0.3266 0.1986 4.0, 7.0 0.26
BXD87 m 5.2 1.0328   10 0.3266 0.1986 3.0, 7.0 0.33
BXD89 f 5.2 0.91894   10 0.29059 0.1767 4.0, 7.0 0.26
BXD89 m 5.3 1.1595   10 0.36667 0.2188 3.0, 7.0 0.56
BXD90 f 5.0 1.0954   6 0.44721 0.2191 4.0, 6.0 -0.26
BXD90 m 5.5 0.54772   6 0.22361 0.0996 5.0, 6.0 1.01
BXD92 f 6.0 1.4142   2   1.0 0.2357 5.0, 7.0 2.33
BXD92 m 4.6667 1.1547   3 0.66667 0.2474 4.0, 6.0 -0.86
BXD96 f 5.4 0.96609   10 0.30551 0.1789 4.0, 6.0 0.78
BXD96 m 5.0 0.94281   10 0.29814 0.1886 4.0, 7.0 -0.11
BXD97 f 5.1 0.99443   10 0.31447 0.195 4.0, 7.0 0.0
BXD97 m 5.2 0.91894   10 0.29059 0.1767 4.0, 7.0 0.33
BXD98 f 4.5 1.0488   6 0.42817 0.2331 3.0, 6.0 -1.55
BXD98 m 5.0 0.8165   7 0.30861 0.1633 4.0, 6.0 -0.11
C57BL/6J f 5.0 1.0954   6 0.44721 0.2191 3.0, 6.0 -0.26
C57BL/6J m 5.2 0.91894   10 0.29059 0.1767 4.0, 7.0 0.33
DBA/2J f 5.4 1.2649   10 0.4 0.2342 3.0, 7.0 0.78
DBA/2J m 4.3 0.94868   10 0.3 0.2206 3.0, 6.0 -1.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 6.0 0.7123 7.3983 4.6017
BXD1 m 4.5 0.7123 5.8983 3.1017
BXD100 f 5.1 0.3186 5.7253 4.4747
BXD100 m 5.0 0.3186 5.6253 4.3747
BXD101 f 5.0 0.4113 5.8073 4.1927
BXD101 m 5.625 0.3562 6.3241 4.9259
BXD102 f 4.9 0.3186 5.5253 4.2747
BXD102 m 5.1 0.3186 5.7253 4.4747
BXD11 f 5.0 0.3186 5.6253 4.3747
BXD11 m 5.1 0.3186 5.7253 4.4747
BXD13 f 5.2 0.3186 5.8253 4.5747
BXD13 m 5.3 0.3186 5.9253 4.6747
BXD14 f 5.7 0.3186 6.3253 5.0747
BXD14 m 4.1 0.3186 4.7253 3.4747
BXD15 f 5.6 0.3186 6.2253 4.9747
BXD15 m 5.5 0.3186 6.1253 4.8747
BXD16 f 5.0 0.3186 5.6253 4.3747
BXD16 m 4.8 0.3186 5.4253 4.1747
BXD19 f 6.0 0.7123 7.3983 4.6017
BXD19 m 5.5 0.7123 6.8983 4.1017
BXD2 f 4.6 0.3186 5.2253 3.9747
BXD2 m 5.4 0.3186 6.0253 4.7747
BXD21 f 5.0 0.3186 5.6253 4.3747
BXD21 m 5.25 0.3562 5.9491 4.5509
BXD27 f 5.0 0.3186 5.6253 4.3747
BXD27 m 4.8 0.3186 5.4253 4.1747
BXD28 f 4.8 0.3186 5.4253 4.1747
BXD28 m 3.9 0.3186 4.5253 3.2747
BXD31 f 5.0 0.3186 5.6253 4.3747
BXD31 m 5.0 0.3186 5.6253 4.3747
BXD32 f 5.4 0.3186 6.0253 4.7747
BXD32 m 5.0 0.3186 5.6253 4.3747
BXD34 f 5.5 0.7123 6.8983 4.1017
BXD34 m 4.5 0.7123 5.8983 3.1017
BXD39 f 5.0 0.3186 5.6253 4.3747
BXD39 m 4.3 0.3186 4.9253 3.6747
BXD40 f 5.4 0.3186 6.0253 4.7747
BXD40 m 4.8 0.3186 5.4253 4.1747
BXD42 f 4.9 0.3186 5.5253 4.2747
BXD42 m 5.3 0.3186 5.9253 4.6747
BXD43 f 5.1 0.3186 5.7253 4.4747
BXD43 m 4.9 0.3186 5.5253 4.2747
BXD44 f 4.8 0.3186 5.4253 4.1747
BXD44 m 5.1 0.3186 5.7253 4.4747
BXD48 f 5.1 0.3186 5.7253 4.4747
BXD48 m 5.1 0.3186 5.7253 4.4747
BXD49 f 5.6 0.3186 6.2253 4.9747
BXD49 m 5.5 0.3186 6.1253 4.8747
BXD50 f 4.6 0.3186 5.2253 3.9747
BXD50 m 4.7 0.3186 5.3253 4.0747
BXD51 f 5.6 0.3186 6.2253 4.9747
BXD51 m 4.9 0.3186 5.5253 4.2747
BXD6 f 5.3 0.3186 5.9253 4.6747
BXD6 m 4.8 0.3186 5.4253 4.1747
BXD61 f 4.8 0.3186 5.4253 4.1747
BXD61 m 5.2 0.3186 5.8253 4.5747
BXD62 f 4.9 0.3186 5.5253 4.2747
BXD62 m 5.8 0.3186 6.4253 5.1747
BXD65 f 5.1667 0.4113 5.974 4.3594
BXD65 m 5.2 0.3186 5.8253 4.5747
BXD66 f 5.25 0.5037 6.2387 4.2613
BXD66 m 5.5 0.5037 6.4887 4.5113
BXD68 f 5.5 0.5037 6.4887 4.5113
BXD68 m 5.6667 0.4113 6.474 4.8594
BXD69 f 5.0 0.3186 5.6253 4.3747
BXD69 m 4.3 0.3186 4.9253 3.6747
BXD70 f 5.0 0.3186 5.6253 4.3747
BXD70 m 5.0 0.3186 5.6253 4.3747
BXD73 f 4.7 0.3186 5.3253 4.0747
BXD73 m 5.3 0.3186 5.9253 4.6747
BXD75 f 5.0 0.3186 5.6253 4.3747
BXD75 m 5.2 0.3186 5.8253 4.5747
BXD77 f 4.5 0.5037 5.4887 3.5113
BXD77 m 4.75 0.5037 5.7387 3.7613
BXD8 f 4.6 0.3186 5.2253 3.9747
BXD8 m 4.5 0.3186 5.1253 3.8747
BXD80 f 5.1 0.3186 5.7253 4.4747
BXD80 m 4.7 0.3186 5.3253 4.0747
BXD81 f 5.2 0.3186 5.8253 4.5747
BXD81 m 5.3 0.3186 5.9253 4.6747
BXD84 f 5.1 0.3186 5.7253 4.4747
BXD84 m 5.2 0.3186 5.8253 4.5747
BXD85 f 4.75 0.5037 5.7387 3.7613
BXD85 m 5.25 0.5037 6.2387 4.2613
BXD86 f 4.8 0.3186 5.4253 4.1747
BXD86 m 5.3 0.3186 5.9253 4.6747
BXD87 f 5.2 0.3186 5.8253 4.5747
BXD87 m 5.2 0.3186 5.8253 4.5747
BXD89 f 5.2 0.3186 5.8253 4.5747
BXD89 m 5.3 0.3186 5.9253 4.6747
BXD90 f 5.0 0.4113 5.8073 4.1927
BXD90 m 5.5 0.4113 6.3073 4.6927
BXD92 f 6.0 0.7123 7.3983 4.6017
BXD92 m 4.6667 0.5816 5.8084 3.525
BXD96 f 5.4 0.3186 6.0253 4.7747
BXD96 m 5.0 0.3186 5.6253 4.3747
BXD97 f 5.1 0.3186 5.7253 4.4747
BXD97 m 5.2 0.3186 5.8253 4.5747
BXD98 f 4.5 0.4113 5.3073 3.6927
BXD98 m 5.0 0.3808 5.7474 4.2526
C57BL/6J f 5.0 0.4113 5.8073 4.1927
C57BL/6J m 5.2 0.3186 5.8253 4.5747
DBA/2J f 5.4 0.3186 6.0253 4.7747
DBA/2J m 4.3 0.3186 4.9253 3.6747


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 5.25 0.5037 6.2387 4.2613
BXD100 both 5.05 0.2253 5.4922 4.6078
BXD101 both 5.3125 0.272 5.8465 4.7785
BXD102 both 5.0 0.2253 5.4422 4.5578
BXD11 both 5.05 0.2253 5.4922 4.6078
BXD13 both 5.25 0.2253 5.6922 4.8078
BXD14 both 4.9 0.2253 5.3422 4.4578
BXD15 both 5.55 0.2253 5.9922 5.1078
BXD16 both 4.9 0.2253 5.3422 4.4578
BXD19 both 5.75 0.5037 6.7387 4.7613
BXD2 both 5.0 0.2253 5.4422 4.5578
BXD21 both 5.125 0.2389 5.594 4.656
BXD27 both 4.9 0.2253 5.3422 4.4578
BXD28 both 4.35 0.2253 4.7922 3.9078
BXD31 both 5.0 0.2253 5.4422 4.5578
BXD32 both 5.2 0.2253 5.6422 4.7578
BXD34 both 5.0 0.5037 5.9887 4.0113
BXD39 both 4.65 0.2253 5.0922 4.2078
BXD40 both 5.1 0.2253 5.5422 4.6578
BXD42 both 5.1 0.2253 5.5422 4.6578
BXD43 both 5.0 0.2253 5.4422 4.5578
BXD44 both 4.95 0.2253 5.3922 4.5078
BXD48 both 5.1 0.2253 5.5422 4.6578
BXD49 both 5.55 0.2253 5.9922 5.1078
BXD50 both 4.65 0.2253 5.0922 4.2078
BXD51 both 5.25 0.2253 5.6922 4.8078
BXD6 both 5.05 0.2253 5.4922 4.6078
BXD61 both 5.0 0.2253 5.4422 4.5578
BXD62 both 5.35 0.2253 5.7922 4.9078
BXD65 both 5.1833 0.2601 5.6939 4.6728
BXD66 both 5.375 0.3562 6.0741 4.6759
BXD68 both 5.5833 0.3251 6.2216 4.9451
BXD69 both 4.65 0.2253 5.0922 4.2078
BXD70 both 5.0 0.2253 5.4422 4.5578
BXD73 both 5.0 0.2253 5.4422 4.5578
BXD75 both 5.1 0.2253 5.5422 4.6578
BXD77 both 4.625 0.3562 5.3241 3.9259
BXD8 both 4.55 0.2253 4.9922 4.1078
BXD80 both 4.9 0.2253 5.3422 4.4578
BXD81 both 5.25 0.2253 5.6922 4.8078
BXD84 both 5.15 0.2253 5.5922 4.7078
BXD85 both 5.0 0.3562 5.6991 4.3009
BXD86 both 5.05 0.2253 5.4922 4.6078
BXD87 both 5.2 0.2253 5.6422 4.7578
BXD89 both 5.25 0.2253 5.6922 4.8078
BXD90 both 5.25 0.2908 5.8208 4.6792
BXD92 both 5.3333 0.4598 6.2359 4.4308
BXD96 both 5.2 0.2253 5.6422 4.7578
BXD97 both 5.15 0.2253 5.5922 4.7078
BXD98 both 4.75 0.2802 5.3001 4.1999
C57BL/6J both 5.1 0.2601 5.6106 4.5894
DBA/2J both 4.85 0.2253 5.2922 4.4078




  GWAS USING LINEAR MIXED MODELS