Project measure / variable:   Crusio1   groom_freq

ID, description, units MPD:62013   groom_freq   frequency of bouts of grooming, 20 min test   [n]  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Crusio1 - frequency of bouts of grooming, 20 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means7.588   n 6.4365   n
Median of the strain means7.55   n 5.8   n
SD of the strain means± 2.9955 ± 2.9895
Coefficient of variation (CV)0.3948 0.4645
Min–max range of strain means2.6   –   16.5   n 2.5   –   18.0   n
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 390.1929 390.1929 22.9857 < 0.0001
strain 52 4086.9348 78.5949 4.6299 < 0.0001
sex:strain 52 1049.6034 20.1847 1.1891 0.1747
Residuals 804 13648.2536 16.9754


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 11.5 0.70711   2   0.5 0.0615 11.0, 12.0 1.31
BXD1 m 5.0 2.8284   2   2.0 0.5657 3.0, 7.0 -0.48
BXD100 f 9.6 4.3512   10 1.376 0.4533 5.0, 19.0 0.67
BXD100 m 7.7 3.401   10 1.0755 0.4417 4.0, 16.0 0.42
BXD101 f 8.0 5.099   6 2.0817 0.6374 2.0, 15.0 0.14
BXD101 m 15.125 16.617   8 5.875 1.0986 3.0, 43.0 2.91
BXD102 f 2.6 1.3499   10 0.42687 0.5192 -1.67
BXD102 m 3.9 1.8529   10 0.58595 0.4751 1.0, 7.0 -0.85
BXD11 f 11.3 3.8887   10 1.2297 0.3441 6.0, 18.0 1.24
BXD11 m 7.2 2.974   10 0.94045 0.4131 3.0, 12.0 0.26
BXD13 f 7.7 3.335   10 1.0546 0.4331 4.0, 15.0 0.04
BXD13 m 6.2 4.158   10 1.3149 0.6706 -0.08
BXD14 f 6.3 3.9455   10 1.2477 0.6263 3.0, 16.0 -0.43
BXD14 m 6.2 3.0111   10 0.95219 0.4857 3.0, 12.0 -0.08
BXD15 f 5.2 2.2509   10 0.71181 0.4329 1.0, 9.0 -0.8
BXD15 m 5.7 2.5841   10 0.81718 0.4534 1.0, 9.0 -0.25
BXD16 f 10.8 6.391   10 2.021 0.5918 2.0, 20.0 1.07
BXD16 m 5.1 2.2828   10 0.72188 0.4476 2.0, 8.0 -0.45
BXD18 f 9.5 0.70711   2   0.5 0.0744 9.0, 10.0 0.64
BXD18 m 10.5 3.5355   2   2.5 0.3367 8.0, 13.0 1.36
BXD19 f 10.5 7.7782   2   5.5 0.7408 5.0, 16.0 0.97
BXD19 m 18.0 2.8284   2   2.0 0.1571 16.0, 20.0 3.87
BXD2 f 10.6 6.7856   10 2.1458 0.6402 5.0, 28.0 1.01
BXD2 m 7.9 3.9567   10 1.2512 0.5008 3.0, 16.0 0.49
BXD21 f 7.8 3.6148   10 1.1431 0.4634 3.0, 13.0 0.07
BXD21 m 3.8 2.0976   10 0.66332 0.552 1.0, 8.0 -0.88
BXD27 f 5.0 5.7349   10 1.8135 1.147 -0.86
BXD27 m 3.6 2.7568   10 0.87178 0.7658 -0.95
BXD28 f 8.0 4.1096   10 1.2996 0.5137 4.0, 17.0 0.14
BXD28 m 7.9 2.4244   10 0.76667 0.3069 6.0, 14.0 0.49
BXD31 f 10.2 4.9171   10 1.5549 0.4821 6.0, 19.0 0.87
BXD31 m 6.4 3.9215   10 1.2401 0.6127 2.0, 16.0 -0.01
BXD32 f 7.4 2.7968   10 0.88443 0.3779 5.0, 12.0 -0.06
BXD32 m 7.5 5.2122   10 1.6482 0.695 0.36
BXD33 f 4.0 0.0   1   0.0 0.0 4.0, 4.0 -1.2
BXD33 m 13.0 0.0   1   0.0 0.0 13.0, 13.0 2.2
BXD34 f 16.5 3.5355   2   2.5 0.2143 14.0, 19.0 2.98
BXD34 m 12.0 7.0711   2   5.0 0.5893 7.0, 17.0 1.86
BXD39 f 8.6 4.4272   10 1.4 0.5148 3.0, 16.0 0.34
BXD39 m 6.9 3.6347   10 1.1494 0.5268 2.0, 14.0 0.16
BXD40 f 5.5 1.8409   10 0.58214 0.3347 2.0, 8.0 -0.7
BXD40 m 6.2 3.4577   10 1.0934 0.5577 2.0, 12.0 -0.08
BXD42 f 6.9 3.0714   10 0.97125 0.4451 3.0, 14.0 -0.23
BXD42 m 5.0 3.496   10 1.1055 0.6992 1.0, 12.0 -0.48
BXD43 f 11.3 6.5498   10 2.0712 0.5796 2.0, 19.0 1.24
BXD43 m 6.4 3.0984   10 0.9798 0.4841 2.0, 12.0 -0.01
BXD44 f 5.6 3.0623   10 0.96839 0.5468 2.0, 12.0 -0.66
BXD44 m 4.8 3.6454   10 1.1528 0.7595 1.0, 12.0 -0.55
BXD48 f 7.0 4.1633   10 1.3166 0.5948 3.0, 15.0 -0.2
BXD48 m 4.1 3.035   10 0.95975 0.7402 1.0, 10.0 -0.78
BXD49 f 5.4 2.7162   10 0.85894 0.503 3.0, 12.0 -0.73
BXD49 m 4.4 1.8379   10 0.58119 0.4177 2.0, 8.0 -0.68
BXD50 f 4.9 2.9231   10 0.92436 0.5965 1.0, 10.0 -0.9
BXD50 m 3.5 5.2967   10 1.675 1.5134 -0.98
BXD51 f 6.2 4.8259   10 1.5261 0.7784 1.0, 17.0 -0.46
BXD51 m 5.7 4.2177   10 1.3337 0.7399 1.0, 15.0 -0.25
BXD6 f 7.7 3.2677   10 1.0333 0.4244 4.0, 14.0 0.04
BXD6 m 6.1 5.1088   10 1.6155 0.8375 2.0, 19.0 -0.11
BXD61 f 9.3 3.7133   10 1.1743 0.3993 6.0, 16.0 0.57
BXD61 m 7.2 2.7809   10 0.87939 0.3862 3.0, 11.0 0.26
BXD62 f 5.7 2.9458   10 0.93155 0.5168 2.0, 10.0 -0.63
BXD62 m 5.7 2.4967   10 0.78951 0.438 2.0, 9.0 -0.25
BXD65 f 3.8333 3.7639   6 1.5366 0.9819 -1.25
BXD65 m 3.5 1.7795   10 0.56273 0.5084 1.0, 6.0 -0.98
BXD66 f 13.75 7.3201   4 3.66 0.5324 8.0, 24.0 2.06
BXD66 m 11.75 0.5   4 0.25 0.0426 11.0, 12.0 1.78
BXD68 f 8.0 2.4495   4 1.2247 0.3062 5.0, 10.0 0.14
BXD68 m 7.8333 2.6394   6 1.0775 0.337 4.0, 11.0 0.47
BXD69 f 6.0 6.2183   10 1.9664 1.0364 1.0, 23.0 -0.53
BXD69 m 4.4 3.3066   10 1.0456 0.7515 -0.68
BXD70 f 3.2 1.3166   10 0.41633 0.4114 1.0, 6.0 -1.46
BXD70 m 2.5 1.6499   10 0.52175 0.66 -1.32
BXD71 m 3.5 2.1213   2   1.5 0.6061 2.0, 5.0 -0.98
BXD73 f 6.7 2.7508   10 0.86987 0.4106 3.0, 12.0 -0.3
BXD73 m 6.4 2.2211   10 0.70238 0.347 4.0, 11.0 -0.01
BXD75 f 5.4 1.7764   10 0.56174 0.329 3.0, 9.0 -0.73
BXD75 m 5.8 4.2374   10 1.34 0.7306 2.0, 14.0 -0.21
BXD77 f 15.0 6.9282   4 3.4641 0.4619 5.0, 21.0 2.47
BXD77 m 10.5 5.8023   4 2.9011 0.5526 6.0, 19.0 1.36
BXD8 f 10.8 8.7025   10 2.752 0.8058 3.0, 30.0 1.07
BXD8 m 6.7 2.7508   10 0.86987 0.4106 2.0, 11.0 0.09
BXD80 f 6.3 1.6364   10 0.51747 0.2597 3.0, 9.0 -0.43
BXD80 m 6.3 1.1595   10 0.36667 0.184 5.0, 8.0 -0.05
BXD81 f 7.9 7.1872   10 2.2728 0.9098 1.0, 25.0 0.1
BXD81 m 4.4 3.2387   10 1.0242 0.7361 2.0, 10.0 -0.68
BXD84 f 3.8 1.9889   10 0.62893 0.5234 1.0, 7.0 -1.26
BXD84 m 4.7 2.5408   10 0.80346 0.5406 1.0, 8.0 -0.58
BXD85 f 3.0 0.8165   4 0.40825 0.2722 2.0, 4.0 -1.53
BXD85 m 4.25 1.893   4 0.94648 0.4454 3.0, 7.0 -0.73
BXD86 f 4.0 3.1623   10 1.0 0.7906 -1.2
BXD86 m 3.9 2.0248   10 0.64031 0.5192 2.0, 8.0 -0.85
BXD87 f 6.2 4.5166   10 1.4283 0.7285 2.0, 14.0 -0.46
BXD87 m 5.3 2.7909   10 0.88255 0.5266 3.0, 10.0 -0.38
BXD89 f 3.7 3.4976   10 1.106 0.9453 1.0, 11.0 -1.3
BXD89 m 4.4 2.7568   10 0.87178 0.6265 1.0, 9.0 -0.68
BXD90 f 5.8333 4.446   6 1.8151 0.7622 1.0, 14.0 -0.59
BXD90 m 5.5 1.7607   6 0.7188 0.3201 3.0, 8.0 -0.31
BXD92 f 8.0 2.8284   2   2.0 0.3536 6.0, 10.0 0.14
BXD92 m 3.3333 0.57735   3 0.33333 0.1732 3.0, 4.0 -1.04
BXD96 f 7.9 3.1429   10 0.99387 0.3978 4.0, 13.0 0.1
BXD96 m 5.5 3.6591   10 1.1571 0.6653 -0.31
BXD97 f 8.5 3.4075   10 1.0775 0.4009 4.0, 15.0 0.3
BXD97 m 6.0 3.4641   10 1.0954 0.5774 1.0, 11.0 -0.15
BXD98 f 9.8333 3.7103   6 1.5147 0.3773 6.0, 16.0 0.75
BXD98 m 4.7143 2.1381   7 0.80812 0.4535 1.0, 8.0 -0.58
C57BL/6J f 5.9 4.1218   10 1.3034 0.6986 -0.56
C57BL/6J m 6.3 4.5473   10 1.438 0.7218 2.0, 16.0 -0.05
DBA/2J f 9.6 6.5862   10 2.0827 0.6861 3.0, 26.0 0.67
DBA/2J m 7.8 4.9171   10 1.5549 0.6304 4.0, 19.0 0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 11.5 2.9134 17.2187 5.7813
BXD1 m 5.0 2.9134 10.7187 -0.7187
BXD100 f 9.6 1.3029 12.1575 7.0425
BXD100 m 7.7 1.3029 10.2575 5.1425
BXD101 f 8.0 1.682 11.3017 4.6983
BXD101 m 15.125 1.4567 17.9844 12.2656
BXD102 f 2.6 1.3029 5.1575 0.0425
BXD102 m 3.9 1.3029 6.4575 1.3425
BXD11 f 11.3 1.3029 13.8575 8.7425
BXD11 m 7.2 1.3029 9.7575 4.6425
BXD13 f 7.7 1.3029 10.2575 5.1425
BXD13 m 6.2 1.3029 8.7575 3.6425
BXD14 f 6.3 1.3029 8.8575 3.7425
BXD14 m 6.2 1.3029 8.7575 3.6425
BXD15 f 5.2 1.3029 7.7575 2.6425
BXD15 m 5.7 1.3029 8.2575 3.1425
BXD16 f 10.8 1.3029 13.3575 8.2425
BXD16 m 5.1 1.3029 7.6575 2.5425
BXD18 f 9.5 2.9134 15.2187 3.7813
BXD18 m 10.5 2.9134 16.2187 4.7813
BXD19 f 10.5 2.9134 16.2187 4.7813
BXD19 m 18.0 2.9134 23.7187 12.2813
BXD2 f 10.6 1.3029 13.1575 8.0425
BXD2 m 7.9 1.3029 10.4575 5.3425
BXD21 f 7.8 1.3029 10.3575 5.2425
BXD21 m 3.8 1.3029 6.3575 1.2425
BXD27 f 5.0 1.3029 7.5575 2.4425
BXD27 m 3.6 1.3029 6.1575 1.0425
BXD28 f 8.0 1.3029 10.5575 5.4425
BXD28 m 7.9 1.3029 10.4575 5.3425
BXD31 f 10.2 1.3029 12.7575 7.6425
BXD31 m 6.4 1.3029 8.9575 3.8425
BXD32 f 7.4 1.3029 9.9575 4.8425
BXD32 m 7.5 1.3029 10.0575 4.9425
BXD34 f 16.5 2.9134 22.2187 10.7813
BXD34 m 12.0 2.9134 17.7187 6.2813
BXD39 f 8.6 1.3029 11.1575 6.0425
BXD39 m 6.9 1.3029 9.4575 4.3425
BXD40 f 5.5 1.3029 8.0575 2.9425
BXD40 m 6.2 1.3029 8.7575 3.6425
BXD42 f 6.9 1.3029 9.4575 4.3425
BXD42 m 5.0 1.3029 7.5575 2.4425
BXD43 f 11.3 1.3029 13.8575 8.7425
BXD43 m 6.4 1.3029 8.9575 3.8425
BXD44 f 5.6 1.3029 8.1575 3.0425
BXD44 m 4.8 1.3029 7.3575 2.2425
BXD48 f 7.0 1.3029 9.5575 4.4425
BXD48 m 4.1 1.3029 6.6575 1.5425
BXD49 f 5.4 1.3029 7.9575 2.8425
BXD49 m 4.4 1.3029 6.9575 1.8425
BXD50 f 4.9 1.3029 7.4575 2.3425
BXD50 m 3.5 1.3029 6.0575 0.9425
BXD51 f 6.2 1.3029 8.7575 3.6425
BXD51 m 5.7 1.3029 8.2575 3.1425
BXD6 f 7.7 1.3029 10.2575 5.1425
BXD6 m 6.1 1.3029 8.6575 3.5425
BXD61 f 9.3 1.3029 11.8575 6.7425
BXD61 m 7.2 1.3029 9.7575 4.6425
BXD62 f 5.7 1.3029 8.2575 3.1425
BXD62 m 5.7 1.3029 8.2575 3.1425
BXD65 f 3.8333 1.682 7.135 0.5316
BXD65 m 3.5 1.3029 6.0575 0.9425
BXD66 f 13.75 2.0601 17.7937 9.7063
BXD66 m 11.75 2.0601 15.7937 7.7063
BXD68 f 8.0 2.0601 12.0437 3.9563
BXD68 m 7.8333 1.682 11.135 4.5316
BXD69 f 6.0 1.3029 8.5575 3.4425
BXD69 m 4.4 1.3029 6.9575 1.8425
BXD70 f 3.2 1.3029 5.7575 0.6425
BXD70 m 2.5 1.3029 5.0575 -0.0575
BXD73 f 6.7 1.3029 9.2575 4.1425
BXD73 m 6.4 1.3029 8.9575 3.8425
BXD75 f 5.4 1.3029 7.9575 2.8425
BXD75 m 5.8 1.3029 8.3575 3.2425
BXD77 f 15.0 2.0601 19.0437 10.9563
BXD77 m 10.5 2.0601 14.5437 6.4563
BXD8 f 10.8 1.3029 13.3575 8.2425
BXD8 m 6.7 1.3029 9.2575 4.1425
BXD80 f 6.3 1.3029 8.8575 3.7425
BXD80 m 6.3 1.3029 8.8575 3.7425
BXD81 f 7.9 1.3029 10.4575 5.3425
BXD81 m 4.4 1.3029 6.9575 1.8425
BXD84 f 3.8 1.3029 6.3575 1.2425
BXD84 m 4.7 1.3029 7.2575 2.1425
BXD85 f 3.0 2.0601 7.0437 -1.0437
BXD85 m 4.25 2.0601 8.2937 0.2063
BXD86 f 4.0 1.3029 6.5575 1.4425
BXD86 m 3.9 1.3029 6.4575 1.3425
BXD87 f 6.2 1.3029 8.7575 3.6425
BXD87 m 5.3 1.3029 7.8575 2.7425
BXD89 f 3.7 1.3029 6.2575 1.1425
BXD89 m 4.4 1.3029 6.9575 1.8425
BXD90 f 5.8333 1.682 9.135 2.5316
BXD90 m 5.5 1.682 8.8017 2.1983
BXD92 f 8.0 2.9134 13.7187 2.2813
BXD92 m 3.3333 2.3788 8.0026 -1.336
BXD96 f 7.9 1.3029 10.4575 5.3425
BXD96 m 5.5 1.3029 8.0575 2.9425
BXD97 f 8.5 1.3029 11.0575 5.9425
BXD97 m 6.0 1.3029 8.5575 3.4425
BXD98 f 9.8333 1.682 13.135 6.5316
BXD98 m 4.7143 1.5573 7.7711 1.6575
C57BL/6J f 5.9 1.3029 8.4575 3.3425
C57BL/6J m 6.3 1.3029 8.8575 3.7425
DBA/2J f 9.6 1.3029 12.1575 7.0425
DBA/2J m 7.8 1.3029 10.3575 5.2425


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 8.25 2.0601 12.2937 4.2063
BXD100 both 8.65 0.9213 10.4584 6.8416
BXD101 both 11.5625 1.1126 13.7464 9.3786
BXD102 both 3.25 0.9213 5.0584 1.4416
BXD11 both 9.25 0.9213 11.0584 7.4416
BXD13 both 6.95 0.9213 8.7584 5.1416
BXD14 both 6.25 0.9213 8.0584 4.4416
BXD15 both 5.45 0.9213 7.2584 3.6416
BXD16 both 7.95 0.9213 9.7584 6.1416
BXD18 both 10.0 2.0601 14.0437 5.9563
BXD19 both 14.25 2.0601 18.2937 10.2063
BXD2 both 9.25 0.9213 11.0584 7.4416
BXD21 both 5.8 0.9213 7.6084 3.9916
BXD27 both 4.3 0.9213 6.1084 2.4916
BXD28 both 7.95 0.9213 9.7584 6.1416
BXD31 both 8.3 0.9213 10.1084 6.4916
BXD32 both 7.45 0.9213 9.2584 5.6416
BXD34 both 14.25 2.0601 18.2937 10.2063
BXD39 both 7.75 0.9213 9.5584 5.9416
BXD40 both 5.85 0.9213 7.6584 4.0416
BXD42 both 5.95 0.9213 7.7584 4.1416
BXD43 both 8.85 0.9213 10.6584 7.0416
BXD44 both 5.2 0.9213 7.0084 3.3916
BXD48 both 5.55 0.9213 7.3584 3.7416
BXD49 both 4.9 0.9213 6.7084 3.0916
BXD50 both 4.2 0.9213 6.0084 2.3916
BXD51 both 5.95 0.9213 7.7584 4.1416
BXD6 both 6.9 0.9213 8.7084 5.0916
BXD61 both 8.25 0.9213 10.0584 6.4416
BXD62 both 5.7 0.9213 7.5084 3.8916
BXD65 both 3.6667 1.0638 5.7548 1.5785
BXD66 both 12.75 1.4567 15.6094 9.8906
BXD68 both 7.9167 1.3298 10.5269 5.3064
BXD69 both 5.2 0.9213 7.0084 3.3916
BXD70 both 2.85 0.9213 4.6584 1.0416
BXD73 both 6.55 0.9213 8.3584 4.7416
BXD75 both 5.6 0.9213 7.4084 3.7916
BXD77 both 12.75 1.4567 15.6094 9.8906
BXD8 both 8.75 0.9213 10.5584 6.9416
BXD80 both 6.3 0.9213 8.1084 4.4916
BXD81 both 6.15 0.9213 7.9584 4.3416
BXD84 both 4.25 0.9213 6.0584 2.4416
BXD85 both 3.625 1.4567 6.4844 0.7656
BXD86 both 3.95 0.9213 5.7584 2.1416
BXD87 both 5.75 0.9213 7.5584 3.9416
BXD89 both 4.05 0.9213 5.8584 2.2416
BXD90 both 5.6667 1.1894 8.0013 3.332
BXD92 both 5.6667 1.8806 9.3581 1.9753
BXD96 both 6.7 0.9213 8.5084 4.8916
BXD97 both 7.25 0.9213 9.0584 5.4416
BXD98 both 7.2738 1.1461 9.5235 5.0241
C57BL/6J both 6.1 0.9213 7.9084 4.2916
DBA/2J both 8.7 0.9213 10.5084 6.8916




  GWAS USING LINEAR MIXED MODELS