Project measure / variable:   Crusio1   rear

ID, description, units MPD:62010   rear   number of rearings, forepaws not resting against wall, 20 min test   [n]  
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-12wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Crusio1 - number of rearings, forepaws not resting against wall, 20 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means42.631   n 53.19   n
Median of the strain means41.1   n 49.167   n
SD of the strain means± 19.947 ± 22.046
Coefficient of variation (CV)0.4679 0.4145
Min–max range of strain means11.667   –   116.0   n 18.0   –   116.0   n
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15619.1829 15619.1829 22.5514 < 0.0001
strain 52 330790.8268 6361.3621 9.1847 < 0.0001
sex:strain 52 50362.8083 968.5155 1.3984 0.0361
Residuals 804 556853.6667 692.6041


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 43.5 43.134   2   30.5 0.9916 13.0, 74.0 0.04
BXD1 m 50.0 56.57   2   40.0 1.1314 10.0, 90.0 -0.14
BXD100 f 44.9 17.426   10 5.5105 0.3881 17.0, 67.0 0.11
BXD100 m 61.3 35.396   10 11.193 0.5774 30.0, 114.0 0.37
BXD101 f 64.17 44.075   6 17.993 0.6869 29.0, 145.0 1.08
BXD101 m 92.75 46.818   8 16.553 0.5048 13.0, 158.0 1.79
BXD102 f 45.1 17.947   10 5.6754 0.3979 19.0, 68.0 0.12
BXD102 m 46.7 17.588   10 5.5619 0.3766 23.0, 76.0 -0.29
BXD11 f 32.0 22.676   10 7.1709 0.7086 1.0, 69.0 -0.53
BXD11 m 31.0 19.431   10 6.1446 0.6268 5.0, 71.0 -1.01
BXD13 f 38.9 27.658   10 8.7464 0.711 4.0, 93.0 -0.19
BXD13 m 38.6 26.458   10 8.3669 0.6854 9.0, 99.0 -0.66
BXD14 f 54.7 24.463   10 7.736 0.4472 18.0, 98.0 0.61
BXD14 m 50.9 26.002   10 8.2225 0.5108 1.0, 100.0 -0.1
BXD15 f 16.7 13.937   10 4.4072 0.8345 2.0, 36.0 -1.3
BXD15 m 46.5 13.015   10 4.1157 0.2799 33.0, 76.0 -0.3
BXD16 f 57.1 17.22   10 5.4456 0.3016 29.0, 96.0 0.73
BXD16 m 34.5 13.55   10 4.285 0.3928 15.0, 53.0 -0.85
BXD18 f 28.5 4.9497   2   3.5 0.1737 25.0, 32.0 -0.71
BXD18 m 52.0 49.497   2   35.0 0.9519 17.0, 87.0 -0.05
BXD19 f 14.0 5.6569   2   4.0 0.4041 10.0, 18.0 -1.44
BXD19 m 23.5 6.364   2   4.5 0.2708 19.0, 28.0 -1.35
BXD2 f 16.6 13.201   10 4.1745 0.7952 3.0, 51.0 -1.31
BXD2 m 29.1 18.976   10 6.0008 0.6521 5.0, 67.0 -1.09
BXD21 f 53.5 17.596   10 5.5643 0.3289 24.0, 78.0 0.54
BXD21 m 64.4 31.224   10 9.8739 0.4848 26.0, 116.0 0.51
BXD27 f 18.1 23.082   10 7.2991 1.2752 -1.23
BXD27 m 47.4 51.11   10 16.162 1.0782 1.0, 178.0 -0.26
BXD28 f 44.2 18.054   10 5.7093 0.4085 27.0, 89.0 0.08
BXD28 m 34.6 16.174   10 5.1147 0.4675 13.0, 65.0 -0.84
BXD31 f 37.0 6.2004   10 1.9607 0.1676 30.0, 50.0 -0.28
BXD31 m 47.5 15.7   10 4.9649 0.3305 27.0, 80.0 -0.26
BXD32 f 32.0 13.098   10 4.1419 0.4093 16.0, 51.0 -0.53
BXD32 m 57.2 15.259   10 4.8254 0.2668 33.0, 81.0 0.18
BXD33 f 23.0 0.0   1   0.0 0.0 23.0, 23.0 -0.98
BXD33 m 116.0 0.0   1   0.0 0.0 116.0, 116.0 2.85
BXD34 f 39.5 12.021   2   8.5 0.3043 31.0, 48.0 -0.16
BXD34 m 87.0 9.8995   2   7.0 0.1138 80.0, 94.0 1.53
BXD39 f 43.3 26.166   10 8.2745 0.6043 6.0, 98.0 0.03
BXD39 m 24.1 17.527   10 5.5427 0.7273 4.0, 51.0 -1.32
BXD40 f 19.1 13.739   10 4.3447 0.7193 3.0, 46.0 -1.18
BXD40 m 35.2 23.446   10 7.4144 0.6661 3.0, 77.0 -0.82
BXD42 f 29.9 13.519   10 4.2751 0.4521 12.0, 62.0 -0.64
BXD42 m 47.3 24.436   10 7.7274 0.5166 19.0, 85.0 -0.27
BXD43 f 56.2 15.612   10 4.9369 0.2778 41.0, 87.0 0.68
BXD43 m 85.8 19.008   10 6.0107 0.2215 64.0, 124.0 1.48
BXD44 f 38.3 23.852   10 7.5425 0.6228 7.0, 74.0 -0.22
BXD44 m 53.2 26.114   10 8.2581 0.4909 15.0, 103.0 0.0
BXD48 f 91.9 32.185   10 10.178 0.3502 45.0, 130.0 2.47
BXD48 m 91.4 37.185   10 11.759 0.4068 41.0, 154.0 1.73
BXD49 f 34.7 10.625   10 3.3601 0.3062 21.0, 54.0 -0.4
BXD49 m 60.7 28.044   10 8.8682 0.462 22.0, 102.0 0.34
BXD50 f 27.7 13.03   10 4.1205 0.4704 13.0, 48.0 -0.75
BXD50 m 35.2 34.688   10 10.969 0.9855 2.0, 111.0 -0.82
BXD51 f 25.3 18.5   10 5.8501 0.7312 5.0, 58.0 -0.87
BXD51 m 25.9 11.808   10 3.7341 0.4559 7.0, 42.0 -1.24
BXD6 f 59.8 32.272   10 10.205 0.5397 23.0, 111.0 0.86
BXD6 m 68.0 39.212   10 12.4 0.5766 7.0, 125.0 0.67
BXD61 f 60.5 35.45   10 11.21 0.586 17.0, 135.0 0.9
BXD61 m 79.6 22.277   10 7.0446 0.2799 51.0, 113.0 1.2
BXD62 f 42.7 19.619   10 6.204 0.4595 9.0, 68.0 0.0
BXD62 m 34.5 21.272   10 6.7268 0.6166 8.0, 65.0 -0.85
BXD65 f 49.0 10.139   6 4.1392 0.2069 35.0, 61.0 0.32
BXD65 m 62.6 20.299   10 6.4191 0.3243 33.0, 92.0 0.43
BXD66 f 29.75 21.731   4 10.866 0.7305 14.0, 61.0 -0.65
BXD66 m 31.5 16.217   4 8.1086 0.5148 10.0, 49.0 -0.98
BXD68 f 51.5 14.177   4 7.0887 0.2753 41.0, 71.0 0.44
BXD68 m 18.0 14.014   6 5.7213 0.7786 5.0, 42.0 -1.6
BXD69 f 87.9 37.308   10 11.798 0.4244 28.0, 151.0 2.27
BXD69 m 84.9 21.769   10 6.8839 0.2564 53.0, 121.0 1.44
BXD70 f 25.1 15.088   10 4.7713 0.6011 5.0, 52.0 -0.88
BXD70 m 27.8 12.647   10 3.9994 0.4549 7.0, 47.0 -1.15
BXD71 m 51.0 28.284   2   20.0 0.5546 31.0, 71.0 -0.1
BXD73 f 61.4 26.154   10 8.2707 0.426 17.0, 93.0 0.94
BXD73 m 73.7 37.968   10 12.007 0.5152 27.0, 171.0 0.93
BXD75 f 50.1 30.238   10 9.562 0.6035 14.0, 120.0 0.37
BXD75 m 87.4 41.932   10 13.26 0.4798 35.0, 151.0 1.55
BXD77 f 45.25 19.619   4 9.8096 0.4336 26.0, 72.0 0.13
BXD77 m 38.75 21.03   4 10.515 0.5427 25.0, 70.0 -0.65
BXD8 f 34.8 21.102   10 6.673 0.6064 9.0, 76.0 -0.39
BXD8 m 34.1 20.289   10 6.416 0.595 9.0, 80.0 -0.87
BXD80 f 23.8 18.25   10 5.7712 0.7668 3.0, 67.0 -0.94
BXD80 m 30.3 24.527   10 7.7561 0.8095 8.0, 69.0 -1.04
BXD81 f 63.8 28.15   10 8.9017 0.4412 22.0, 112.0 1.06
BXD81 m 72.6 40.746   10 12.885 0.5612 8.0, 122.0 0.88
BXD84 f 28.3 26.829   10 8.484 0.948 2.0, 85.0 -0.72
BXD84 m 32.5 22.921   10 7.2484 0.7053 1.0, 65.0 -0.94
BXD85 f 35.25 15.521   4 7.7607 0.4403 16.0, 51.0 -0.37
BXD85 m 52.5 56.74   4 28.368 1.0807 11.0, 135.0 -0.03
BXD86 f 59.8 27.442   10 8.6779 0.4589 18.0, 108.0 0.86
BXD86 m 61.3 24.427   10 7.7245 0.3985 34.0, 116.0 0.37
BXD87 f 32.6 17.734   10 5.6079 0.544 1.0, 70.0 -0.5
BXD87 m 49.0 25.254   10 7.9861 0.5154 10.0, 92.0 -0.19
BXD89 f 45.5 19.901   10 6.2933 0.4374 18.0, 85.0 0.14
BXD89 m 75.5 33.952   10 10.736 0.4497 38.0, 145.0 1.01
BXD90 f 45.0 17.516   6 7.1508 0.3892 25.0, 75.0 0.12
BXD90 m 49.167 28.965   6 11.825 0.5891 13.0, 89.0 -0.18
BXD92 f 35.0 0.0   2   0.0 0.0 35.0, 35.0 -0.38
BXD92 m 68.33 20.207   3 11.667 0.2957 45.0, 80.0 0.69
BXD96 f 116.0 60.35   10 19.084 0.5202 42.0, 200.0 3.68
BXD96 m 96.5 44.338   10 14.021 0.4595 46.0, 172.0 1.96
BXD97 f 55.6 22.589   10 7.1433 0.4063 19.0, 92.0 0.65
BXD97 m 49.1 28.466   10 9.0018 0.5798 19.0, 107.0 -0.19
BXD98 f 11.667 6.0222   6 2.4585 0.5162 2.0, 17.0 -1.55
BXD98 m 35.0 19.287   7 7.2899 0.5511 9.0, 65.0 -0.83
C57BL/6J f 60.9 45.503   10 14.389 0.7472 2.0, 153.0 0.92
C57BL/6J m 54.2 25.108   10 7.9398 0.4632 23.0, 101.0 0.05
DBA/2J f 21.2 19.504   10 6.1677 0.92 4.0, 69.0 -1.07
DBA/2J m 37.8 29.799   10 9.4231 0.7883 1.0, 95.0 -0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 43.5 18.6092 80.0283 6.9717
BXD1 m 50.0 18.6092 86.5283 13.4717
BXD100 f 44.9 8.3223 61.236 28.564
BXD100 m 61.3 8.3223 77.636 44.964
BXD101 f 64.1667 10.744 85.2563 43.077
BXD101 m 92.75 9.3046 111.0142 74.4858
BXD102 f 45.1 8.3223 61.436 28.764
BXD102 m 46.7 8.3223 63.036 30.364
BXD11 f 32.0 8.3223 48.336 15.664
BXD11 m 31.0 8.3223 47.336 14.664
BXD13 f 38.9 8.3223 55.236 22.564
BXD13 m 38.6 8.3223 54.936 22.264
BXD14 f 54.7 8.3223 71.036 38.364
BXD14 m 50.9 8.3223 67.236 34.564
BXD15 f 16.7 8.3223 33.036 0.364
BXD15 m 46.5 8.3223 62.836 30.164
BXD16 f 57.1 8.3223 73.436 40.764
BXD16 m 34.5 8.3223 50.836 18.164
BXD18 f 28.5 18.6092 65.0283 -8.0283
BXD18 m 52.0 18.6092 88.5283 15.4717
BXD19 f 14.0 18.6092 50.5283 -22.5283
BXD19 m 23.5 18.6092 60.0283 -13.0283
BXD2 f 16.6 8.3223 32.936 0.264
BXD2 m 29.1 8.3223 45.436 12.764
BXD21 f 53.5 8.3223 69.836 37.164
BXD21 m 64.4 8.3223 80.736 48.064
BXD27 f 18.1 8.3223 34.436 1.764
BXD27 m 47.4 8.3223 63.736 31.064
BXD28 f 44.2 8.3223 60.536 27.864
BXD28 m 34.6 8.3223 50.936 18.264
BXD31 f 37.0 8.3223 53.336 20.664
BXD31 m 47.5 8.3223 63.836 31.164
BXD32 f 32.0 8.3223 48.336 15.664
BXD32 m 57.2 8.3223 73.536 40.864
BXD34 f 39.5 18.6092 76.0283 2.9717
BXD34 m 87.0 18.6092 123.5283 50.4717
BXD39 f 43.3 8.3223 59.636 26.964
BXD39 m 24.1 8.3223 40.436 7.764
BXD40 f 19.1 8.3223 35.436 2.764
BXD40 m 35.2 8.3223 51.536 18.864
BXD42 f 29.9 8.3223 46.236 13.564
BXD42 m 47.3 8.3223 63.636 30.964
BXD43 f 56.2 8.3223 72.536 39.864
BXD43 m 85.8 8.3223 102.136 69.464
BXD44 f 38.3 8.3223 54.636 21.964
BXD44 m 53.2 8.3223 69.536 36.864
BXD48 f 91.9 8.3223 108.236 75.564
BXD48 m 91.4 8.3223 107.736 75.064
BXD49 f 34.7 8.3223 51.036 18.364
BXD49 m 60.7 8.3223 77.036 44.364
BXD50 f 27.7 8.3223 44.036 11.364
BXD50 m 35.2 8.3223 51.536 18.864
BXD51 f 25.3 8.3223 41.636 8.964
BXD51 m 25.9 8.3223 42.236 9.564
BXD6 f 59.8 8.3223 76.136 43.464
BXD6 m 68.0 8.3223 84.336 51.664
BXD61 f 60.5 8.3223 76.836 44.164
BXD61 m 79.6 8.3223 95.936 63.264
BXD62 f 42.7 8.3223 59.036 26.364
BXD62 m 34.5 8.3223 50.836 18.164
BXD65 f 49.0 10.744 70.0896 27.9104
BXD65 m 62.6 8.3223 78.936 46.264
BXD66 f 29.75 13.1587 55.5794 3.9206
BXD66 m 31.5 13.1587 57.3294 5.6706
BXD68 f 51.5 13.1587 77.3294 25.6706
BXD68 m 18.0 10.744 39.0896 -3.0896
BXD69 f 87.9 8.3223 104.236 71.564
BXD69 m 84.9 8.3223 101.236 68.564
BXD70 f 25.1 8.3223 41.436 8.764
BXD70 m 27.8 8.3223 44.136 11.464
BXD73 f 61.4 8.3223 77.736 45.064
BXD73 m 73.7 8.3223 90.036 57.364
BXD75 f 50.1 8.3223 66.436 33.764
BXD75 m 87.4 8.3223 103.736 71.064
BXD77 f 45.25 13.1587 71.0794 19.4206
BXD77 m 38.75 13.1587 64.5794 12.9206
BXD8 f 34.8 8.3223 51.136 18.464
BXD8 m 34.1 8.3223 50.436 17.764
BXD80 f 23.8 8.3223 40.136 7.464
BXD80 m 30.3 8.3223 46.636 13.964
BXD81 f 63.8 8.3223 80.136 47.464
BXD81 m 72.6 8.3223 88.936 56.264
BXD84 f 28.3 8.3223 44.636 11.964
BXD84 m 32.5 8.3223 48.836 16.164
BXD85 f 35.25 13.1587 61.0794 9.4206
BXD85 m 52.5 13.1587 78.3294 26.6706
BXD86 f 59.8 8.3223 76.136 43.464
BXD86 m 61.3 8.3223 77.636 44.964
BXD87 f 32.6 8.3223 48.936 16.264
BXD87 m 49.0 8.3223 65.336 32.664
BXD89 f 45.5 8.3223 61.836 29.164
BXD89 m 75.5 8.3223 91.836 59.164
BXD90 f 45.0 10.744 66.0896 23.9104
BXD90 m 49.1667 10.744 70.2563 28.077
BXD92 f 35.0 18.6092 71.5283 -1.5283
BXD92 m 68.3333 15.1943 98.1586 38.5081
BXD96 f 116.0 8.3223 132.336 99.664
BXD96 m 96.5 8.3223 112.836 80.164
BXD97 f 55.6 8.3223 71.936 39.264
BXD97 m 49.1 8.3223 65.436 32.764
BXD98 f 11.6667 10.744 32.7563 -9.423
BXD98 m 35.0 9.947 54.5252 15.4748
C57BL/6J f 60.9 8.3223 77.236 44.564
C57BL/6J m 54.2 8.3223 70.536 37.864
DBA/2J f 21.2 8.3223 37.536 4.864
DBA/2J m 37.8 8.3223 54.136 21.464


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 46.75 13.1587 72.5794 20.9206
BXD100 both 53.1 5.8847 64.6513 41.5487
BXD101 both 78.4583 7.1065 92.4078 64.5088
BXD102 both 45.9 5.8847 57.4513 34.3487
BXD11 both 31.5 5.8847 43.0513 19.9487
BXD13 both 38.75 5.8847 50.3013 27.1987
BXD14 both 52.8 5.8847 64.3513 41.2487
BXD15 both 31.6 5.8847 43.1513 20.0487
BXD16 both 45.8 5.8847 57.3513 34.2487
BXD18 both 40.25 13.1587 66.0794 14.4206
BXD19 both 18.75 13.1587 44.5794 -7.0794
BXD2 both 22.85 5.8847 34.4013 11.2987
BXD21 both 58.95 5.8847 70.5013 47.3987
BXD27 both 32.75 5.8847 44.3013 21.1987
BXD28 both 39.4 5.8847 50.9513 27.8487
BXD31 both 42.25 5.8847 53.8013 30.6987
BXD32 both 44.6 5.8847 56.1513 33.0487
BXD34 both 63.25 13.1587 89.0794 37.4206
BXD39 both 33.7 5.8847 45.2513 22.1487
BXD40 both 27.15 5.8847 38.7013 15.5987
BXD42 both 38.6 5.8847 50.1513 27.0487
BXD43 both 71.0 5.8847 82.5513 59.4487
BXD44 both 45.75 5.8847 57.3013 34.1987
BXD48 both 91.65 5.8847 103.2013 80.0987
BXD49 both 47.7 5.8847 59.2513 36.1487
BXD50 both 31.45 5.8847 43.0013 19.8987
BXD51 both 25.6 5.8847 37.1513 14.0487
BXD6 both 63.9 5.8847 75.4513 52.3487
BXD61 both 70.05 5.8847 81.6013 58.4987
BXD62 both 38.6 5.8847 50.1513 27.0487
BXD65 both 55.8 6.7951 69.1383 42.4617
BXD66 both 30.625 9.3046 48.8892 12.3608
BXD68 both 34.75 8.4939 51.4228 18.0772
BXD69 both 86.4 5.8847 97.9513 74.8487
BXD70 both 26.45 5.8847 38.0013 14.8987
BXD73 both 67.55 5.8847 79.1013 55.9987
BXD75 both 68.75 5.8847 80.3013 57.1987
BXD77 both 42.0 9.3046 60.2642 23.7358
BXD8 both 34.45 5.8847 46.0013 22.8987
BXD80 both 27.05 5.8847 38.6013 15.4987
BXD81 both 68.2 5.8847 79.7513 56.6487
BXD84 both 30.4 5.8847 41.9513 18.8487
BXD85 both 43.875 9.3046 62.1392 25.6108
BXD86 both 60.55 5.8847 72.1013 48.9987
BXD87 both 40.8 5.8847 52.3513 29.2487
BXD89 both 60.5 5.8847 72.0513 48.9487
BXD90 both 47.0833 7.5972 61.996 32.1707
BXD92 both 51.6667 12.0122 75.2456 28.0877
BXD96 both 106.25 5.8847 117.8013 94.6987
BXD97 both 52.35 5.8847 63.9013 40.7987
BXD98 both 23.3333 7.3208 37.7035 8.9632
C57BL/6J both 57.55 5.8847 69.1013 45.9987
DBA/2J both 29.5 5.8847 41.0513 17.9487




  GWAS USING LINEAR MIXED MODELS