Phenotype measure:   Crusio1   periphery_dist_pct

ID, description, units MPD:62007   periphery_dist_pct   percentage of total distance run in thigmotaxis zone, 20 min test   [%]
Data set, strains Crusio1   BXD w/par   55 strains     sex: both     age: 10-12wks
Procedure open field test
Ontology mappings

  STRAIN COMPARISON PLOT
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Crusio1 - percentage of total distance run in thigmotaxis zone, 20 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains55 strains
Mean of the strain means60.01   % 58.11   %
Median of the strain means59.03   % 57.81   %
SD of the strain means± 9.4165 ± 8.1645
Coefficient of variation (CV)0.1569 0.1405
Min–max range of strain means36.32   –   81.09   % 43.65   –   78.5   %
Mean sample size per strain8.4   mice 8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 978.3603 978.3603 9.3659 0.0023
strain 52 64663.3226 1243.5254 11.9043 < 0.0001
sex:strain 52 6094.8462 117.2086 1.122 0.262
Residuals 804 83986.1107 104.4603


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD1 f 57.36 8.1416   2   5.757 0.1419 51.60354426, 63.117493 -0.28
BXD1 m 61.65 0.3296   2   0.23307 0.0053 61.42093201, 61.88706219 0.43
BXD100 f 63.82 9.2877   10 2.937 0.1455 48.74228046, 81.977829 0.4
BXD100 m 52.68 7.4995   10 2.3715 0.1424 41.10257475, 63.99168399 -0.66
BXD101 f 68.29 10.87   6 4.4377 0.1592 51.56488857, 79.194282 0.88
BXD101 m 62.43 8.1214   8 2.8713 0.1301 52.20929215, 75.57619539 0.53
BXD102 f 57.88 5.7858   10 1.8296 0.1 49.4129099, 66.47331787 -0.23
BXD102 m 59.73 5.221   10 1.651 0.0874 50.61525254, 65.58406603 0.2
BXD11 f 65.59 8.8863   10 2.8101 0.1355 55.47828555, 79.10349374 0.59
BXD11 m 64.63 12.513   10 3.9568 0.1936 51.76915149, 88.3133406 0.8
BXD13 f 68.64 11.577   10 3.6609 0.1687 50.4869076, 92.49937703 0.92
BXD13 m 66.61 7.8226   10 2.4737 0.1174 49.03032892, 75.19807096 1.04
BXD14 f 44.979 8.3941   10 2.6545 0.1866 29.61736151, 61.22876425 -1.6
BXD14 m 44.854 13.381   10 4.2313 0.2983 33.16634117, 79.37751429 -1.62
BXD15 f 71.13 12.183   10 3.8525 0.1713 49.48618001, 85.81314879 1.18
BXD15 m 72.51 9.3589   10 2.9596 0.1291 63.71980167, 93.67504836 1.76
BXD16 f 54.48 8.0787   10 2.5547 0.1483 43.99974669, 66.23376623 -0.59
BXD16 m 58.32 12.353   10 3.9064 0.2118 42.85080913, 75.19777932 0.03
BXD18 f 58.7 6.0728   2   4.2942 0.1035 54.40441415, 62.99271906 -0.14
BXD18 m 54.75 9.9109   2   7.008 0.181 47.74154498, 61.75760878 -0.41
BXD19 f 65.53 3.6235   2   2.5622 0.0553 62.96429859, 68.08867498 0.59
BXD19 m 57.81 5.1329   2   3.6295 0.0888 54.18056602, 61.439523 -0.04
BXD2 f 57.11 11.656   10 3.686 0.2041 43.47448803, 74.26105153 -0.31
BXD2 m 52.73 10.407   10 3.2911 0.1974 38.645331, 70.50221951 -0.66
BXD21 f 55.25 9.7211   10 3.0741 0.1759 43.89140272, 69.69835466 -0.51
BXD21 m 45.55 8.7829   10 2.7774 0.1928 34.30096763, 60.29985944 -1.54
BXD27 f 71.83 13.162   10 4.1621 0.1832 46.12109745, 90.14431538 1.26
BXD27 m 71.41 17.361   10 5.49 0.2431 35.08370594, 99.23400049 1.63
BXD28 f 61.85 9.4595   10 2.9913 0.1529 41.73529061, 71.08059506 0.2
BXD28 m 64.14 14.277   10 4.5148 0.2226 46.12920449, 88.14881105 0.74
BXD31 f 68.48 13.573   10 4.2922 0.1982 45.32593318, 87.11369436 0.9
BXD31 m 55.39 12.236   10 3.8693 0.2209 30.68478112, 79.16129032 -0.33
BXD32 f 61.12 10.58   10 3.3458 0.1731 47.79307682, 78.05758487 0.12
BXD32 m 58.86 6.5094   10 2.0584 0.1106 44.09750581, 68.6307402 0.09
BXD33 f 41.396 0.0   1   0.0 0.0 41.39577877, 41.39577877 -1.98
BXD33 m 45.258 0.0   1   0.0 0.0 45.25764192, 45.25764192 -1.57
BXD34 f 56.51 4.8838   2   3.4533 0.0864 53.05899092, 59.96566524 -0.37
BXD34 m 51.13 0.24772   2   0.17516 0.0048 50.95747327, 51.3077972 -0.85
BXD39 f 64.34 10.265   10 3.2461 0.1595 52.55474453, 80.58646882 0.46
BXD39 m 70.34 10.926   10 3.4552 0.1553 52.95472872, 83.83084577 1.5
BXD40 f 43.55 21.697   10 6.8612 0.4982 0.389896593, 64.44481383 -1.75
BXD40 m 48.955 9.4904   10 3.0011 0.1939 33.41132885, 63.16145012 -1.12
BXD42 f 62.21 7.9128   10 2.5022 0.1272 56.31194859, 79.35348168 0.23
BXD42 m 59.18 5.7259   10 1.8107 0.0968 45.38076082, 64.26434128 0.13
BXD43 f 54.0 9.8853   10 3.126 0.183 42.75926141, 77.39047877 -0.64
BXD43 m 51.76 4.5182   10 1.4288 0.0873 40.81608233, 56.03363449 -0.78
BXD44 f 65.91 9.8962   10 3.1294 0.1502 50.24107216, 79.52300311 0.63
BXD44 m 56.45 9.1309   10 2.8874 0.1617 42.25398936, 73.72469178 -0.2
BXD48 f 48.221 7.9448   10 2.5124 0.1648 33.83193598, 58.42503439 -1.25
BXD48 m 48.241 6.5107   10 2.0589 0.135 38.85103011, 62.09272167 -1.21
BXD49 f 60.79 11.866   10 3.7525 0.1952 39.34936113, 77.89808917 0.08
BXD49 m 55.08 6.6147   10 2.0918 0.1201 46.5388544, 65.68542569 -0.37
BXD50 f 58.07 5.4014   10 1.7081 0.093 49.82033537, 66.61482634 -0.21
BXD50 m 59.25 8.7299   10 2.7606 0.1473 49.2446413, 80.63433974 0.14
BXD51 f 81.09 7.275   10 2.3005 0.0897 67.54536427, 89.92050398 2.24
BXD51 m 78.5 5.0288   10 1.5902 0.0641 71.28245476, 84.04617434 2.5
BXD6 f 67.73 11.088   10 3.5062 0.1637 48.22551011, 88.10463968 0.82
BXD6 m 64.58 8.7779   10 2.7758 0.1359 50.24989411, 74.91007194 0.79
BXD61 f 64.22 6.7882   10 2.1466 0.1057 52.87267828, 73.85130455 0.45
BXD61 m 63.67 6.6872   10 2.1147 0.105 55.37373898, 72.19411951 0.68
BXD62 f 58.1 16.283   10 5.1492 0.2803 21.21524202, 74.4115506 -0.2
BXD62 m 49.544 20.154   10 6.3731 0.4068 2.447804176, 72.24076547 -1.05
BXD65 f 52.77 9.3703   6 3.8254 0.1776 42.05004036, 66.91008174 -0.77
BXD65 m 53.07 6.6206   10 2.0936 0.1248 42.19446922, 62.48806872 -0.62
BXD66 f 59.47 6.4946   4 3.2473 0.1092 54.12967749, 68.81331404 -0.06
BXD66 m 62.58 8.1118   4 4.0559 0.1296 55.58255704, 72.43784112 0.55
BXD68 f 60.73 11.485   4 5.7425 0.1891 46.24574867, 74.32753541 0.08
BXD68 m 64.67 8.5422   6 3.4874 0.1321 53.71881558, 72.66798649 0.8
BXD69 f 49.315 6.09   10 1.9258 0.1235 40.74842534, 62.8850385 -1.14
BXD69 m 49.714 13.567   10 4.2902 0.2729 19.47288173, 69.89575986 -1.03
BXD70 f 54.92 12.684   10 4.0111 0.2309 27.46629902, 72.80214328 -0.54
BXD70 m 49.539 8.5477   10 2.703 0.1725 29.43969611, 60.511883 -1.05
BXD71 m 53.55 0.0402   2   0.02842 0.0008 53.5216895, 53.57853674 -0.56
BXD73 f 77.72 9.4195   10 2.9787 0.1212 64.43535304, 90.22609184 1.88
BXD73 m 73.57 10.869   10 3.437 0.1477 59.13969479, 96.72347734 1.89
BXD75 f 45.528 13.582   10 4.2949 0.2983 21.67615106, 65.78727468 -1.54
BXD75 m 43.65 4.9733   10 1.5727 0.1139 35.37899706, 53.34734978 -1.77
BXD77 f 36.32 6.7462   4 3.3731 0.1857 26.88477952, 42.45704235 -2.52
BXD77 m 55.79 9.7238   4 4.8619 0.1743 42.73927393, 64.13146815 -0.28
BXD8 f 52.7 9.868   10 3.1205 0.1873 40.97198201, 70.30608189 -0.78
BXD8 m 57.86 7.0837   10 2.2401 0.1224 44.63985772, 66.92981197 -0.03
BXD80 f 71.91 9.5725   10 3.0271 0.1331 49.05952644, 80.41984024 1.26
BXD80 m 74.68 6.2449   10 1.9748 0.0836 63.67370892, 83.87450336 2.03
BXD81 f 52.26 7.5741   10 2.3951 0.1449 42.87900188, 65.08297532 -0.82
BXD81 m 51.08 11.222   10 3.5488 0.2197 31.69581749, 70.29255841 -0.86
BXD84 f 61.83 11.589   10 3.6646 0.1874 46.80625095, 81.17246899 0.19
BXD84 m 63.85 9.7743   10 3.0909 0.1531 50.10502731, 80.54149798 0.7
BXD85 f 59.14 2.4458   4 1.2229 0.0414 57.16966967, 62.5966626 -0.09
BXD85 m 51.68 12.694   4 6.347 0.2456 41.9809307, 69.79892495 -0.79
BXD86 f 57.35 7.7747   10 2.4586 0.1356 41.06442577, 68.20876827 -0.28
BXD86 m 57.5 8.4698   10 2.6784 0.1473 48.03528468, 75.47533756 -0.07
BXD87 f 77.06 14.177   10 4.4833 0.184 42.02566909, 90.62684802 1.81
BXD87 m 64.48 11.159   10 3.5287 0.1731 47.3414305, 83.92248062 0.78
BXD89 f 55.53 9.0268   10 2.8545 0.1626 40.92137167, 67.15711493 -0.48
BXD89 m 54.75 9.3934   10 2.9704 0.1716 38.04030478, 69.69613513 -0.41
BXD90 f 64.05 4.5051   6 1.8392 0.0703 58.17057611, 70.54581624 0.43
BXD90 m 62.18 8.9883   6 3.6695 0.1445 51.81118522, 75.10912887 0.5
BXD92 f 55.19 8.6803   2   6.1379 0.1573 49.05559277, 61.33138564 -0.51
BXD92 m 50.27 9.9277   3 5.7318 0.1975 38.81005174, 56.01891998 -0.96
BXD96 f 54.47 6.4903   10 2.0524 0.1192 45.53661829, 63.98283947 -0.59
BXD96 m 51.88 8.4321   10 2.6665 0.1625 37.92894631, 63.51157223 -0.76
BXD97 f 55.7 12.433   10 3.9318 0.2232 27.9888138, 71.93450465 -0.46
BXD97 m 58.6 13.845   10 4.3783 0.2363 39.4019019, 77.58225865 0.06
BXD98 f 68.81 10.254   6 4.1861 0.149 54.33962264, 80.27503935 0.93
BXD98 m 58.82 7.3027   7 2.7602 0.1241 47.5638051, 69.00170419 0.09
C57BL/6J f 58.92 6.3436   10 2.006 0.1077 46.20335607, 66.04364239 -0.12
C57BL/6J m 54.98 12.107   10 3.8287 0.2202 35.67744154, 69.5115725 -0.38
DBA/2J f 80.61 9.4841   10 2.9991 0.1177 56.59494149, 88.08864266 2.19
DBA/2J m 71.27 11.736   10 3.7114 0.1647 53.31646993, 87.08122439 1.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD1 f 57.3605 7.227 71.5466 43.1744
BXD1 m 61.654 7.227 75.8401 47.4679
BXD100 f 63.82 3.232 70.1643 57.4758
BXD100 m 52.6759 3.232 59.0201 46.3317
BXD101 f 68.2948 4.1725 76.4851 60.1044
BXD101 m 62.4282 3.6135 69.5212 55.3351
BXD102 f 57.8775 3.232 64.2217 51.5333
BXD102 m 59.7252 3.232 66.0694 53.381
BXD11 f 65.5856 3.232 71.9298 59.2414
BXD11 m 64.6332 3.232 70.9774 58.289
BXD13 f 68.6431 3.232 74.9873 62.2989
BXD13 m 66.6064 3.232 72.9507 60.2622
BXD14 f 44.9786 3.232 51.3228 38.6344
BXD14 m 44.8544 3.232 51.1986 38.5102
BXD15 f 71.1285 3.232 77.4728 64.7843
BXD15 m 72.5069 3.232 78.8511 66.1626
BXD16 f 54.4816 3.232 60.8259 48.1374
BXD16 m 58.32 3.232 64.6642 51.9757
BXD18 f 58.6986 7.227 72.8847 44.5125
BXD18 m 54.7496 7.227 68.9357 40.5635
BXD19 f 65.5265 7.227 79.7126 51.3404
BXD19 m 57.81 7.227 71.9961 43.6239
BXD2 f 57.108 3.232 63.4522 50.7638
BXD2 m 52.7325 3.232 59.0767 46.3883
BXD21 f 55.2507 3.232 61.595 48.9065
BXD21 m 45.5502 3.232 51.8944 39.206
BXD27 f 71.8291 3.232 78.1733 65.4849
BXD27 m 71.4124 3.232 77.7566 65.0682
BXD28 f 61.8469 3.232 68.1911 55.5027
BXD28 m 64.1392 3.232 70.4834 57.795
BXD31 f 68.4806 3.232 74.8248 62.1364
BXD31 m 55.3888 3.232 61.733 49.0446
BXD32 f 61.1165 3.232 67.4607 54.7723
BXD32 m 58.8555 3.232 65.1997 52.5112
BXD34 f 56.5123 7.227 70.6984 42.3262
BXD34 m 51.1326 7.227 65.3187 36.9465
BXD39 f 64.3448 3.232 70.689 58.0006
BXD39 m 70.3444 3.232 76.6886 64.0002
BXD40 f 43.55 3.232 49.8942 37.2057
BXD40 m 48.9552 3.232 55.2994 42.611
BXD42 f 62.2137 3.232 68.5579 55.8694
BXD42 m 59.1813 3.232 65.5255 52.8371
BXD43 f 54.0037 3.232 60.3479 47.6595
BXD43 m 51.7576 3.232 58.1018 45.4134
BXD44 f 65.9059 3.232 72.2501 59.5617
BXD44 m 56.4549 3.232 62.7991 50.1107
BXD48 f 48.2214 3.232 54.5656 41.8771
BXD48 m 48.2409 3.232 54.5851 41.8967
BXD49 f 60.7932 3.232 67.1374 54.449
BXD49 m 55.0756 3.232 61.4199 48.7314
BXD50 f 58.066 3.232 64.4102 51.7217
BXD50 m 59.2479 3.232 65.5921 52.9037
BXD51 f 81.0905 3.232 87.4347 74.7463
BXD51 m 78.5009 3.232 84.8451 72.1567
BXD6 f 67.7309 3.232 74.0751 61.3867
BXD6 m 64.5832 3.232 70.9274 58.239
BXD61 f 64.2154 3.232 70.5596 57.8711
BXD61 m 63.6671 3.232 70.0113 57.3229
BXD62 f 58.1001 3.232 64.4444 51.7559
BXD62 m 49.5442 3.232 55.8884 43.1999
BXD65 f 52.7692 4.1725 60.9595 44.5788
BXD65 m 53.0655 3.232 59.4097 46.7213
BXD66 f 59.4658 5.1103 69.4968 49.4347
BXD66 m 62.5833 5.1103 72.6143 52.5522
BXD68 f 60.7348 5.1103 70.7659 50.7037
BXD68 m 64.6694 4.1725 72.8598 56.4791
BXD69 f 49.3146 3.232 55.6588 42.9703
BXD69 m 49.7144 3.232 56.0586 43.3702
BXD70 f 54.9227 3.232 61.2669 48.5784
BXD70 m 49.539 3.232 55.8832 43.1948
BXD73 f 77.7204 3.232 84.0646 71.3762
BXD73 m 73.57 3.232 79.9143 67.2258
BXD75 f 45.5275 3.232 51.8718 39.1833
BXD75 m 43.6497 3.232 49.9939 37.3055
BXD77 f 36.3202 5.1103 46.3513 26.2891
BXD77 m 55.7872 5.1103 65.8183 45.7561
BXD8 f 52.6988 3.232 59.043 46.3546
BXD8 m 57.8609 3.232 64.2051 51.5167
BXD80 f 71.9105 3.232 78.2547 65.5663
BXD80 m 74.6818 3.232 81.026 68.3376
BXD81 f 52.2629 3.232 58.6072 45.9187
BXD81 m 51.0772 3.232 57.4214 44.733
BXD84 f 61.8296 3.232 68.1739 55.4854
BXD84 m 63.8451 3.232 70.1894 57.5009
BXD85 f 59.1425 5.1103 69.1736 49.1114
BXD85 m 51.6848 5.1103 61.7159 41.6537
BXD86 f 57.3534 3.232 63.6976 51.0092
BXD86 m 57.4991 3.232 63.8433 51.1549
BXD87 f 77.0579 3.232 83.4021 70.7137
BXD87 m 64.4767 3.232 70.8209 58.1324
BXD89 f 55.5267 3.232 61.8709 49.1825
BXD89 m 54.7465 3.232 61.0908 48.4023
BXD90 f 64.054 4.1725 72.2444 55.8637
BXD90 m 62.184 4.1725 70.3743 53.9936
BXD92 f 55.1935 7.227 69.3796 41.0074
BXD92 m 50.2736 5.9009 61.8565 38.6907
BXD96 f 54.4675 3.232 60.8118 48.1233
BXD96 m 51.8843 3.232 58.2285 45.5401
BXD97 f 55.6957 3.232 62.0399 49.3515
BXD97 m 58.6025 3.232 64.9467 52.2583
BXD98 f 68.8123 4.1725 77.0027 60.622
BXD98 m 58.8245 3.863 66.4073 51.2417
C57BL/6J f 58.9246 3.232 65.2688 52.5804
C57BL/6J m 54.983 3.232 61.3273 48.6388
DBA/2J f 80.6061 3.232 86.9503 74.2618
DBA/2J m 71.2736 3.232 77.6178 64.9294


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
BXD1 both 59.5073 5.1103 69.5383 49.4762
BXD100 both 58.248 2.2854 62.734 53.7619
BXD101 both 65.3615 2.7599 70.7789 59.9441
BXD102 both 58.8013 2.2854 63.2874 54.3153
BXD11 both 65.1094 2.2854 69.5954 60.6233
BXD13 both 67.6248 2.2854 72.1108 63.1387
BXD14 both 44.9165 2.2854 49.4025 40.4304
BXD15 both 71.8177 2.2854 76.3037 67.3317
BXD16 both 56.4008 2.2854 60.8868 51.9148
BXD18 both 56.7241 5.1103 66.7552 46.693
BXD19 both 61.6683 5.1103 71.6994 51.6372
BXD2 both 54.9203 2.2854 59.4063 50.4342
BXD21 both 50.4005 2.2854 54.8865 45.9144
BXD27 both 71.6208 2.2854 76.1068 67.1347
BXD28 both 62.9931 2.2854 67.4791 58.507
BXD31 both 61.9347 2.2854 66.4207 57.4487
BXD32 both 59.986 2.2854 64.472 55.4999
BXD34 both 53.8225 5.1103 63.8536 43.7914
BXD39 both 67.3446 2.2854 71.8307 62.8586
BXD40 both 46.2526 2.2854 50.7386 41.7665
BXD42 both 60.6975 2.2854 65.1835 56.2114
BXD43 both 52.8807 2.2854 57.3667 48.3946
BXD44 both 61.1804 2.2854 65.6664 56.6943
BXD48 both 48.2311 2.2854 52.7172 43.7451
BXD49 both 57.9344 2.2854 62.4204 53.4484
BXD50 both 58.6569 2.2854 63.143 54.1709
BXD51 both 79.7957 2.2854 84.2817 75.3097
BXD6 both 66.1571 2.2854 70.6431 61.671
BXD61 both 63.9412 2.2854 68.4273 59.4552
BXD62 both 53.8222 2.2854 58.3082 49.3361
BXD65 both 52.9173 2.6389 58.0974 47.7373
BXD66 both 61.0245 3.6135 68.1176 53.9315
BXD68 both 62.7021 3.2987 69.1772 56.2271
BXD69 both 49.5145 2.2854 54.0005 45.0285
BXD70 both 52.2308 2.2854 56.7169 47.7448
BXD73 both 75.6452 2.2854 80.1313 71.1592
BXD75 both 44.5886 2.2854 49.0747 40.1026
BXD77 both 46.0537 3.6135 53.1467 38.9606
BXD8 both 55.2798 2.2854 59.7659 50.7938
BXD80 both 73.2962 2.2854 77.7822 68.8101
BXD81 both 51.6701 2.2854 56.1561 47.184
BXD84 both 62.8374 2.2854 67.3234 58.3513
BXD85 both 55.4137 3.6135 62.5067 48.3206
BXD86 both 57.4262 2.2854 61.9123 52.9402
BXD87 both 70.7673 2.2854 75.2533 66.2812
BXD89 both 55.1366 2.2854 59.6227 50.6506
BXD90 both 63.119 2.9504 68.9105 57.3276
BXD92 both 52.7336 4.665 61.8906 43.5765
BXD96 both 53.1759 2.2854 57.662 48.6899
BXD97 both 57.1491 2.2854 61.6351 52.6631
BXD98 both 63.8184 2.8431 69.3992 58.2376
C57BL/6J both 56.9538 2.2854 61.4399 52.4678
DBA/2J both 75.9398 2.2854 80.4259 71.4538




  GWAS USING LINEAR MIXED MODELS