Project measure / variable:   Schoenrock1   FST_immobile_VDD

ID, description, units MPD:61273   FST_immobile_VDD   percentage of time spent immobile in the last 4 mins, 6 min test   [%]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
Procedure forced swim test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time spent immobile in the last 4 mins, 6 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means67.0   %
Median of the strain means69.2   %
SD of the strain means± 11.7
Coefficient of variation (CV)0.175
Min–max range of strain means38.9   –   85.7   %
Mean sample size per strain11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 18962.826 1264.1884 7.8709 < 0.0001
Residuals 164 26340.7766 160.6145


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 56.8 16.1   20 3.61 0.284 28.7, 82.9 -0.87
RIX:CC(003 x 014) f 38.9 11.4   9 3.81 0.293 21.5, 56.7 -2.4
RIX:CC(004 x 017) f 69.0 11.7   14 3.14 0.17 51.9, 85.3 0.17
RIX:CC(006 x 026) f 78.4 9.25   9 3.08 0.118 61.0, 90.7 0.97
RIX:CC(011 x 001) f 69.3 16.4   11 4.96 0.237 26.9, 87.1 0.19
RIX:CC(014 x 003) f 51.7 15.1   6 6.16 0.292 32.2, 67.5 -1.3
RIX:CC(017 x 004) f 66.4 10.6   13 2.94 0.16 50.8, 85.6 -0.05
RIX:CC(023 x 047) f 85.7 8.91   8 3.15 0.104 67.4, 94.7 1.59
RIX:CC(026 x 006) f 80.3 7.76   14 2.07 0.0966 57.4, 88.5 1.13
RIX:CC(032 x 042) f 68.1 12.0   19 2.74 0.176 48.0, 87.8 0.09
RIX:CC(035 x 062) f 65.6 14.9   5 6.65 0.227 52.4, 90.3 -0.12
RIX:CC(041 x 051) f 70.0 12.4   20 2.78 0.178 38.7, 88.5 0.25
RIX:CC(042 x 032) f 74.0 13.7   6 5.59 0.185 49.6, 87.1 0.59
RIX:CC(047 x 023) f 74.0 10.0   6 4.1 0.136 57.6, 84.9 0.59
RIX:CC(051 x 041) f 69.6 12.8   14 3.42 0.184 37.5, 87.4 0.22
RIX:CC(062 x 035) f 54.5 16.6   6 6.79 0.305 28.6, 80.6 -1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 56.7665 2.8339 62.362 51.171
RIX:CC(003 x 014) f 38.93 4.2245 47.2713 30.5887
RIX:CC(004 x 017) f 68.9629 3.3871 75.6508 62.2749
RIX:CC(006 x 026) f 78.3822 4.2245 86.7236 70.0409
RIX:CC(011 x 001) f 69.3018 3.8212 76.8468 61.7568
RIX:CC(014 x 003) f 51.7133 5.1739 61.9293 41.4973
RIX:CC(017 x 004) f 66.4408 3.515 73.3812 59.5004
RIX:CC(023 x 047) f 85.7063 4.4807 94.5536 76.8589
RIX:CC(026 x 006) f 80.3071 3.3871 86.9951 73.6192
RIX:CC(032 x 042) f 68.1032 2.9075 73.8441 62.3623
RIX:CC(035 x 062) f 65.562 5.6677 76.7531 54.3709
RIX:CC(041 x 051) f 69.9645 2.8339 75.56 64.369
RIX:CC(042 x 032) f 74.035 5.1739 84.251 63.819
RIX:CC(047 x 023) f 74.02 5.1739 84.236 63.804
RIX:CC(051 x 041) f 69.5957 3.3871 76.2837 62.9078
RIX:CC(062 x 035) f 54.5233 5.1739 64.7393 44.3073




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA