Project measure / variable:   Schoenrock1   FST_immobile_ME

ID, description, units MPD:61272   FST_immobile_ME   percentage of time spent immobile in the last 4 mins, 6 min test   [%]  methyl-enriched diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
Procedure forced swim test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time spent immobile in the last 4 mins, 6 min test methyl-enriched diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means66.1   %
Median of the strain means66.2   %
SD of the strain means± 8.92
Coefficient of variation (CV)0.135
Min–max range of strain means53.8   –   83.0   %
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 12796.5472 752.7381 3.649 < 0.0001
Residuals 159 32799.6357 206.287


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 66.9 17.0   13 4.71 0.254 29.3, 82.8 0.09
RIX:CC(003 x 014) f 59.7 11.4   3 6.59 0.191 48.7, 71.5 -0.72
RIX:CC(004 x 017) f 61.5 16.5   6 6.72 0.267 42.9, 88.8 -0.51
RIX:CC(005 x 040) f 53.8 18.2   24 3.72 0.339 22.4, 85.3 -1.38
RIX:CC(006 x 026) f 83.0 8.24   5 3.68 0.0993 73.5, 92.3 1.9
RIX:CC(011 x 001) f 65.5 13.3   14 3.55 0.203 41.7, 91.6 -0.06
RIX:CC(014 x 003) f 55.3 6.42   4 3.21 0.116 47.0, 61.1 -1.21
RIX:CC(017 x 004) f 73.0 6.98   2   4.93 0.0957 68.0, 77.9 0.78
RIX:CC(023 x 047) f 72.7 11.7   9 3.9 0.161 54.1, 89.2 0.74
RIX:CC(026 x 006) f 78.2 6.72   5 3.01 0.0859 66.5, 83.5 1.36
RIX:CC(032 x 042) f 72.6 9.78   19 2.24 0.135 48.7, 88.1 0.73
RIX:CC(035 x 062) f 59.4 30.6   2   21.6 0.515 37.7, 81.0 -0.75
RIX:CC(040 x 005) f 55.1 18.0   15 4.64 0.327 27.5, 89.9 -1.23
RIX:CC(041 x 051) f 73.8 14.1   24 2.88 0.191 34.6, 91.5 0.87
RIX:CC(042 x 032) f 74.6 11.2   9 3.74 0.151 56.3, 91.4 0.96
RIX:CC(047 x 023) f 58.7 8.24   4 4.12 0.14 49.7, 66.9 -0.83
RIX:CC(051 x 041) f 69.2 13.3   12 3.85 0.192 49.6, 93.2 0.35
RIX:CC(062 x 035) f 56.4 13.6   7 5.13 0.241 34.7, 81.5 -1.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 66.8546 3.9835 74.722 58.9872
RIX:CC(003 x 014) f 59.68 8.2923 76.0573 43.3027
RIX:CC(004 x 017) f 61.55 5.8635 73.1305 49.9695
RIX:CC(005 x 040) f 53.805 2.9318 59.5952 48.0148
RIX:CC(006 x 026) f 82.976 6.4232 95.6618 70.2902
RIX:CC(011 x 001) f 65.525 3.8386 73.1062 57.9438
RIX:CC(014 x 003) f 55.345 7.1813 69.5281 41.1619
RIX:CC(017 x 004) f 72.955 10.156 93.013 52.897
RIX:CC(023 x 047) f 72.7033 4.7876 82.1588 63.2479
RIX:CC(026 x 006) f 78.21 6.4232 90.8958 65.5242
RIX:CC(032 x 042) f 72.6358 3.295 79.1435 66.1281
RIX:CC(035 x 062) f 59.36 10.156 79.418 39.302
RIX:CC(040 x 005) f 55.056 3.7084 62.3801 47.7319
RIX:CC(041 x 051) f 73.8133 2.9318 79.6036 68.0231
RIX:CC(042 x 032) f 74.5644 4.7876 84.0199 65.109
RIX:CC(047 x 023) f 58.68 7.1813 72.8631 44.4969
RIX:CC(051 x 041) f 69.2275 4.1462 77.4161 61.0389
RIX:CC(062 x 035) f 56.3757 5.4286 67.0972 45.6543




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA