Project measure / variable:   Schoenrock1   FST_immobile_PD

ID, description, units MPD:61271   FST_immobile_PD   percentage of time spent immobile in the last 4 mins, 6 min test   [%]  protein-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
Procedure forced swim test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time spent immobile in the last 4 mins, 6 min test protein-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means65.7   %
Median of the strain means67.2   %
SD of the strain means± 12.4
Coefficient of variation (CV)0.189
Min–max range of strain means34.8   –   83.0   %
Mean sample size per strain8.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 11671.8685 778.1246 4.0615 < 0.0001
Residuals 139 26630.6774 191.5876


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 59.3 11.8   19 2.72 0.2 39.5, 77.4 -0.51
RIX:CC(003 x 014) f 44.6 23.1   4 11.6 0.518 26.8, 76.2 -1.7
RIX:CC(004 x 017) f 69.9 11.7   12 3.38 0.167 51.3, 91.5 0.34
RIX:CC(005 x 040) f 55.5 21.3   14 5.7 0.384 18.4, 91.1 -0.82
RIX:CC(006 x 026) f 82.2 6.62   6 2.7 0.0805 73.8, 92.8 1.33
RIX:CC(011 x 001) f 64.8 10.5   12 3.03 0.162 44.4, 78.1 -0.07
RIX:CC(014 x 003) f 34.8 0.0   1   0.0 0.0 34.8, 34.8 -2.49
RIX:CC(017 x 004) f 67.5 16.9   8 5.96 0.25 39.4, 87.0 0.15
RIX:CC(023 x 047) f 83.0 8.87   10 2.8 0.107 63.4, 91.1 1.4
RIX:CC(026 x 006) f 77.0 4.57   6 1.87 0.0594 70.7, 84.6 0.91
RIX:CC(032 x 042) f 80.1 8.59   7 3.25 0.107 65.1, 91.5 1.16
RIX:CC(035 x 062) f 63.6 0.0   1   0.0 0.0 63.6, 63.6 -0.17
RIX:CC(040 x 005) f 67.9 16.0   16 4.0 0.235 29.7, 89.0 0.18
RIX:CC(041 x 051) f 63.5 12.1   12 3.5 0.191 43.6, 82.4 -0.17
RIX:CC(042 x 032) f 66.8 7.41   6 3.03 0.111 57.3, 76.4 0.09
RIX:CC(047 x 023) f 74.6 16.1   6 6.56 0.216 46.9, 91.1 0.72
RIX:CC(051 x 041) f 67.9 14.4   13 4.0 0.212 37.8, 87.6 0.18
RIX:CC(062 x 035) f 59.0 17.2   4 8.59 0.291 40.7, 82.2 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 59.2705 3.1755 65.549 52.9921
RIX:CC(003 x 014) f 44.6275 6.9208 58.3111 30.9439
RIX:CC(004 x 017) f 69.9067 3.9957 77.8069 62.0065
RIX:CC(005 x 040) f 55.4886 3.6993 62.8027 48.1744
RIX:CC(006 x 026) f 82.2067 5.6508 93.3793 71.0341
RIX:CC(011 x 001) f 64.7933 3.9957 72.6935 56.8931
RIX:CC(017 x 004) f 67.535 4.8937 77.2107 57.8593
RIX:CC(023 x 047) f 82.997 4.3771 91.6512 74.3428
RIX:CC(026 x 006) f 76.9983 5.6508 88.1709 65.8257
RIX:CC(032 x 042) f 80.0829 5.2316 90.4267 69.7391
RIX:CC(040 x 005) f 67.9475 3.4604 74.7893 61.1057
RIX:CC(041 x 051) f 63.5058 3.9957 71.406 55.6056
RIX:CC(042 x 032) f 66.7867 5.6508 77.9593 55.6141
RIX:CC(047 x 023) f 74.5633 5.6508 85.7359 63.3907
RIX:CC(051 x 041) f 67.9392 3.8389 75.5295 60.349
RIX:CC(062 x 035) f 58.96 6.9208 72.6436 45.2764




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA