Project measure / variable:   Schoenrock1   FST_boli_VDD

ID, description, units MPD:61269   FST_boli_VDD   number of fecal boli, 6 min test   [n]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
Procedure forced swim test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - number of fecal boli, 6 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means3.29   n
Median of the strain means3.33   n
SD of the strain means± 1.27
Coefficient of variation (CV)0.385
Min–max range of strain means0.600   –   5.89   n
Mean sample size per strain11.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 193.8403 12.9227 4.1333 < 0.0001
Residuals 164 512.7375 3.1264


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 2.3 1.34   20 0.3 0.583 -0.78
RIX:CC(003 x 014) f 5.89 3.22   9 1.07 0.547 2.05
RIX:CC(004 x 017) f 3.29 1.54   14 0.412 0.469 1.0, 6.0 0.0
RIX:CC(006 x 026) f 2.89 1.9   9 0.633 0.658 -0.32
RIX:CC(011 x 001) f 3.36 1.69   11 0.509 0.502 0.05
RIX:CC(014 x 003) f 4.33 1.97   6 0.803 0.454 2.0, 7.0 0.82
RIX:CC(017 x 004) f 3.23 1.54   13 0.426 0.475 1.0, 6.0 -0.05
RIX:CC(023 x 047) f 4.12 0.991   8 0.35 0.24 2.0, 5.0 0.65
RIX:CC(026 x 006) f 3.36 1.6   14 0.427 0.476 1.0, 6.0 0.05
RIX:CC(032 x 042) f 4.42 2.43   19 0.558 0.551 0.89
RIX:CC(035 x 062) f 0.6 0.548   5 0.245 0.913 -2.12
RIX:CC(041 x 051) f 2.8 1.32   20 0.296 0.472 1.0, 6.0 -0.39
RIX:CC(042 x 032) f 4.33 2.8   6 1.15 0.647 1.0, 7.0 0.82
RIX:CC(047 x 023) f 3.5 0.548   6 0.224 0.156 3.0, 4.0 0.16
RIX:CC(051 x 041) f 3.07 1.54   14 0.412 0.502 -0.17
RIX:CC(062 x 035) f 1.17 1.17   6 0.477 1.0 -1.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 2.3 0.3954 3.0807 1.5193
RIX:CC(003 x 014) f 5.8889 0.5894 7.0527 4.7251
RIX:CC(004 x 017) f 3.2857 0.4726 4.2188 2.3526
RIX:CC(006 x 026) f 2.8889 0.5894 4.0527 1.7251
RIX:CC(011 x 001) f 3.3636 0.5331 4.4163 2.311
RIX:CC(014 x 003) f 4.3333 0.7219 5.7587 2.908
RIX:CC(017 x 004) f 3.2308 0.4904 4.1991 2.2624
RIX:CC(023 x 047) f 4.125 0.6251 5.3594 2.8906
RIX:CC(026 x 006) f 3.3571 0.4726 4.2902 2.424
RIX:CC(032 x 042) f 4.4211 0.4056 5.222 3.6201
RIX:CC(035 x 062) f 0.6 0.7908 2.1614 0.0
RIX:CC(041 x 051) f 2.8 0.3954 3.5807 2.0193
RIX:CC(042 x 032) f 4.3333 0.7219 5.7587 2.908
RIX:CC(047 x 023) f 3.5 0.7219 4.9253 2.0747
RIX:CC(051 x 041) f 3.0714 0.4726 4.0045 2.1383
RIX:CC(062 x 035) f 1.1667 0.7219 2.592 0.0




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA