Project measure / variable:   Schoenrock1   LD_pct_lt_VDD

ID, description, units MPD:61253   LD_pct_lt_VDD   percentage of time in light side, 10 min test   [%]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time in light side, 10 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means28.2   %
Median of the strain means27.8   %
SD of the strain means± 8.11
Coefficient of variation (CV)0.288
Min–max range of strain means15.8   –   45.0   %
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 11248.1963 749.8798 1.7473 0.0469
Residuals 160 68668.1917 429.1762


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 26.0 13.9   20 3.1 0.534 0.28, 54.0 -0.27
RIX:CC(003 x 014) f 35.8 6.71   9 2.24 0.187 25.2, 49.8 0.94
RIX:CC(004 x 017) f 39.5 5.07   12 1.46 0.128 33.6, 47.1 1.4
RIX:CC(006 x 026) f 23.6 4.73   9 1.58 0.201 17.4, 32.7 -0.56
RIX:CC(011 x 001) f 26.7 15.6   11 4.69 0.582 5.62, 67.8 -0.18
RIX:CC(014 x 003) f 20.9 8.69   6 3.55 0.415 7.9, 30.4 -0.89
RIX:CC(017 x 004) f 36.3 8.8   11 2.65 0.242 15.6, 49.6 1.0
RIX:CC(023 x 047) f 16.9 15.6   8 5.52 0.923 1.18, 41.2 -1.39
RIX:CC(026 x 006) f 24.0 10.5   14 2.81 0.438 -0.51
RIX:CC(032 x 042) f 31.7 7.78   19 1.79 0.245 14.3, 47.0 0.44
RIX:CC(035 x 062) f 20.6 8.44   5 3.77 0.41 7.5, 30.4 -0.93
RIX:CC(041 x 051) f 45.0 44.8   20 10.0 0.996 2.08
RIX:CC(042 x 032) f 28.8 12.9   6 5.27 0.449 8.72, 43.8 0.08
RIX:CC(047 x 023) f 15.8 13.0   6 5.31 0.822 -1.52
RIX:CC(051 x 041) f 29.7 34.9   14 9.34 1.18 0.19
RIX:CC(062 x 035) f 29.1 8.4   6 3.43 0.288 15.4, 40.8 0.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 25.953 4.6324 35.1015 16.8045
RIX:CC(003 x 014) f 35.8456 6.9055 49.4833 22.2078
RIX:CC(004 x 017) f 39.525 5.9804 51.3356 27.7144
RIX:CC(006 x 026) f 23.5867 6.9055 37.2244 9.9489
RIX:CC(011 x 001) f 26.7427 6.2463 39.0785 14.4069
RIX:CC(014 x 003) f 20.9317 8.4575 37.6344 4.2289
RIX:CC(017 x 004) f 36.2873 6.2463 48.6231 23.9515
RIX:CC(023 x 047) f 16.9162 7.3244 31.3812 2.4513
RIX:CC(026 x 006) f 23.9964 5.5367 34.9309 13.0619
RIX:CC(032 x 042) f 31.7495 4.7527 41.1356 22.3633
RIX:CC(035 x 062) f 20.56 9.2647 38.8569 2.2631
RIX:CC(041 x 051) f 45.0155 4.6324 54.164 35.867
RIX:CC(042 x 032) f 28.7767 8.4575 45.4794 12.0739
RIX:CC(047 x 023) f 15.8167 8.4575 32.5194 0.0
RIX:CC(051 x 041) f 29.6879 5.5367 40.6224 18.7533
RIX:CC(062 x 035) f 29.1 8.4575 45.8027 12.3973




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA