Project measure / variable:   Schoenrock1   LD_pct_lt_ME

ID, description, units MPD:61252   LD_pct_lt_ME   percentage of time in light side, 10 min test   [%]  methyl-enriched diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - percentage of time in light side, 10 min test methyl-enriched diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means23.7   %
Median of the strain means23.9   %
SD of the strain means± 10.1
Coefficient of variation (CV)0.426
Min–max range of strain means5.04   –   49.3   %
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 9597.7106 564.5712 2.1556 0.0073
Residuals 158 41380.8443 261.9041


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 24.8 13.7   12 3.97 0.555 5.57, 61.6 0.11
RIX:CC(003 x 014) f 15.9 14.3   3 8.27 0.902 0.72, 29.2 -0.77
RIX:CC(004 x 017) f 40.0 9.34   6 3.81 0.234 26.2, 47.9 1.62
RIX:CC(005 x 040) f 23.5 7.68   24 1.57 0.327 3.43, 40.2 -0.02
RIX:CC(006 x 026) f 24.6 6.65   5 2.97 0.27 16.4, 35.0 0.09
RIX:CC(011 x 001) f 19.9 8.59   14 2.3 0.431 0.02, 35.1 -0.37
RIX:CC(014 x 003) f 20.4 14.1   4 7.05 0.692 0.22, 32.8 -0.32
RIX:CC(017 x 004) f 49.3 9.28   2   6.57 0.188 42.8, 55.9 2.55
RIX:CC(023 x 047) f 27.5 29.6   9 9.88 1.08 0.38
RIX:CC(026 x 006) f 21.6 13.5   5 6.05 0.627 1.75, 35.8 -0.2
RIX:CC(032 x 042) f 29.1 7.53   19 1.73 0.258 10.0, 44.3 0.54
RIX:CC(035 x 062) f 17.4 5.02   2   3.55 0.288 13.9, 21.0 -0.62
RIX:CC(040 x 005) f 27.8 23.1   15 5.97 0.833 0.02, 100.0 0.41
RIX:CC(041 x 051) f 15.2 25.5   24 5.21 1.68 -0.84
RIX:CC(042 x 032) f 28.5 11.3   9 3.77 0.397 13.3, 50.9 0.48
RIX:CC(047 x 023) f 5.04 8.33   4 4.16 1.65 0.02, 17.5 -1.85
RIX:CC(051 x 041) f 10.8 12.6   12 3.62 1.16 -1.28
RIX:CC(062 x 035) f 24.4 13.1   7 4.95 0.535 8.97, 43.8 0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 24.7533 4.6718 33.9805 15.5262
RIX:CC(003 x 014) f 15.8967 9.3435 34.351 0.0
RIX:CC(004 x 017) f 39.965 6.6069 53.0142 26.9158
RIX:CC(005 x 040) f 23.4754 3.3034 30.0 16.9508
RIX:CC(006 x 026) f 24.62 7.2375 38.9146 10.3254
RIX:CC(011 x 001) f 19.9314 4.3252 28.4741 11.3887
RIX:CC(014 x 003) f 20.3875 8.0917 36.3694 4.4056
RIX:CC(017 x 004) f 49.315 11.4434 71.9168 26.7132
RIX:CC(023 x 047) f 27.4556 5.3945 38.1102 16.801
RIX:CC(026 x 006) f 21.576 7.2375 35.8706 7.2814
RIX:CC(032 x 042) f 29.1479 3.7127 36.4809 21.8149
RIX:CC(035 x 062) f 17.43 11.4434 40.0318 0.0
RIX:CC(040 x 005) f 27.7747 4.1785 36.0277 19.5216
RIX:CC(041 x 051) f 15.2258 3.3034 21.7504 8.7012
RIX:CC(042 x 032) f 28.4944 5.3945 39.149 17.8398
RIX:CC(047 x 023) f 5.0425 8.0917 21.0244 0.0
RIX:CC(051 x 041) f 10.8083 4.6718 20.0355 1.5812
RIX:CC(062 x 035) f 24.4386 6.1168 36.5198 12.3574




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA