Project measure / variable:   Schoenrock1   LD_dist_tot_VDD

ID, description, units MPD:61249   LD_dist_tot_VDD   total distance traveled (dark + light), 10 min test   [cm]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - total distance traveled (dark + light), 10 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means2133   cm
Median of the strain means2061   cm
SD of the strain means± 975
Coefficient of variation (CV)0.457
Min–max range of strain means511   –   4376   cm
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 190296052.6836 12686403.5122 27.4397 < 0.0001
Residuals 160 73974123.3095 462338.2707


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 1724.0 463.0   20 104.0 0.269 750.0, 2661.0 -0.42
RIX:CC(003 x 014) f 2353.0 574.0   9 191.0 0.244 1457.0, 3366.0 0.23
RIX:CC(004 x 017) f 4376.0 1050.0   12 303.0 0.24 2808.0, 6954.0 2.3
RIX:CC(006 x 026) f 2524.0 255.0   9 85.1 0.101 2256.0, 2941.0 0.4
RIX:CC(011 x 001) f 1803.0 466.0   11 140.0 0.258 761.0, 2348.0 -0.34
RIX:CC(014 x 003) f 1873.0 385.0   6 157.0 0.205 1464.0, 2471.0 -0.27
RIX:CC(017 x 004) f 3796.0 838.0   11 253.0 0.221 2396.0, 5281.0 1.71
RIX:CC(023 x 047) f 1575.0 529.0   8 187.0 0.336 485.0, 2286.0 -0.57
RIX:CC(026 x 006) f 2625.0 1510.0   14 404.0 0.575 1734.0, 7733.0 0.5
RIX:CC(032 x 042) f 2229.0 387.0   19 88.7 0.173 1525.0, 2894.0 0.1
RIX:CC(035 x 062) f 2062.0 622.0   5 278.0 0.301 1077.0, 2602.0 -0.07
RIX:CC(041 x 051) f 559.0 323.0   20 72.2 0.578 21.4, 1157.0 -1.61
RIX:CC(042 x 032) f 2358.0 786.0   6 321.0 0.333 1236.0, 3666.0 0.23
RIX:CC(047 x 023) f 1693.0 609.0   6 249.0 0.36 1079.0, 2792.0 -0.45
RIX:CC(051 x 041) f 511.0 178.0   14 47.7 0.349 231.0, 824.0 -1.66
RIX:CC(062 x 035) f 2060.0 542.0   6 221.0 0.263 1465.0, 2574.0 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 1724.22 152.0425 2024.4889 1423.9511
RIX:CC(003 x 014) f 2353.1444 226.6515 2800.7589 1905.53
RIX:CC(004 x 017) f 4376.0667 196.286 4763.7122 3988.4212
RIX:CC(006 x 026) f 2524.3667 226.6515 2971.9811 2076.7522
RIX:CC(011 x 001) f 1802.7273 205.014 2207.6098 1397.8447
RIX:CC(014 x 003) f 1873.3167 277.5903 2421.5302 1325.1031
RIX:CC(017 x 004) f 3795.5273 205.014 4200.4098 3390.6447
RIX:CC(023 x 047) f 1575.025 240.4003 2049.7918 1100.2582
RIX:CC(026 x 006) f 2625.4857 181.7255 2984.3757 2266.5957
RIX:CC(032 x 042) f 2229.3263 155.9923 2537.3957 1921.2569
RIX:CC(035 x 062) f 2062.4 304.0849 2662.9378 1461.8622
RIX:CC(041 x 051) f 558.515 152.0425 858.7839 258.2461
RIX:CC(042 x 032) f 2357.7333 277.5903 2905.9469 1809.5198
RIX:CC(047 x 023) f 1693.4833 277.5903 2241.6969 1145.2698
RIX:CC(051 x 041) f 511.3643 181.7255 870.2543 152.4743
RIX:CC(062 x 035) f 2059.8167 277.5903 2608.0302 1511.6031




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA